mRNA_H-elongata_contig109779.789.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig109779.789.1 vs. uniprot
Match: D7G0Z8_ECTSI (Pribosyltran domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z8_ECTSI) HSP 1 Score: 225 bits (573), Expect = 2.430e-71 Identity = 108/117 (92.31%), Postives = 114/117 (97.44%), Query Frame = 1
Query: 1 NENRRSQHRYQIVAAEAMEGMARRLEELHPDRFRFHKTSWAKFPDGTDNIEIGGFTPYNVISGEHVLFLASFHNNDVTLSQFQVMICLLQYFVESLTVVLPYYPTGTMERVIKEGQV 351
+++RRSQHRYQI+AAEAMEG+ RLEELHPDRFRFHKTSW KFPDGTDNIEIGGFTPYNVISGEHVLFLASFHNNDVTLSQFQVMICLLQYFVESLTVVLPYYPTGTMERV+KEGQV
Sbjct: 18 HKSRRSQHRYQILAAEAMEGLGERLEELHPDRFRFHKTSWGKFPDGTDNIEIGGFTPYNVISGEHVLFLASFHNNDVTLSQFQVMICLLQYFVESLTVVLPYYPTGTMERVVKEGQV 134
BLAST of mRNA_H-elongata_contig109779.789.1 vs. uniprot
Match: A0A7S2I9D5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I9D5_9STRA) HSP 1 Score: 183 bits (465), Expect = 3.450e-55 Identity = 86/114 (75.44%), Postives = 100/114 (87.72%), Query Frame = 1
Query: 10 RRSQHRYQIVAAEAMEGMARRLEELHPDRFRFHKTSWAKFPDGTDNIEIGGFTPYNVISGEHVLFLASFHNNDVTLSQFQVMICLLQYFVESLTVVLPYYPTGTMERVIKEGQV 351
+R +YQI++AEA E MA+R+EE +PDRF FH T W KFPDGTDNIEIGGF P+N++SGEHVLFLASFHNN+V+LSQFQVMICLLQ F+ESLTVVLPYYP GTM+RV KEGQV
Sbjct: 8 KRQSKQYQIISAEACESMAKRMEEEYPDRFTFHPTKWGKFPDGTDNIEIGGFLPHNLLSGEHVLFLASFHNNEVSLSQFQVMICLLQSFIESLTVVLPYYPVGTMDRVTKEGQV 121
BLAST of mRNA_H-elongata_contig109779.789.1 vs. uniprot
Match: A0A835YPL2_9STRA (Phosphoribosyltransferase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPL2_9STRA) HSP 1 Score: 183 bits (465), Expect = 4.490e-55 Identity = 91/117 (77.78%), Postives = 102/117 (87.18%), Query Frame = 1
Query: 1 NENRRSQHRYQIVAAEAMEGMARRLEELHPDRFRFHKTSWAKFPDGTDNIEIGGFTPYNVISGEHVLFLASFHNNDVTLSQFQVMICLLQYFVESLTVVLPYYPTGTMERVIKEGQV 351
++++R+ RYQI+AA+AME MAR LE +P RFRFH T+W KFPDGTD IEIGGFTP+NVISGEHVLFL SFHNNDVTLSQFQVMI LLQ FVE LTVVLPYYPTGTMERV +EGQV
Sbjct: 17 HKSKRTSKRYQIIAAKAMEPMARLLEANYPARFRFHPTAWGKFPDGTDCIEIGGFTPHNVISGEHVLFLGSFHNNDVTLSQFQVMIALLQNFVEDLTVVLPYYPTGTMERVTREGQV 133
BLAST of mRNA_H-elongata_contig109779.789.1 vs. uniprot
Match: A0A7S0GEW9_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GEW9_9STRA) HSP 1 Score: 183 bits (465), Expect = 2.010e-54 Identity = 87/108 (80.56%), Postives = 97/108 (89.81%), Query Frame = 1
Query: 28 YQIVAAEAMEGMARRLEELHPDRFRFHKTSWAKFPDGTDNIEIGGFTPYNVISGEHVLFLASFHNNDVTLSQFQVMICLLQYFVESLTVVLPYYPTGTMERVIKEGQV 351
Y+I+AA+ E MA ++EE++PDRF FHKTSW KFPDGTDNIEIGGFTP+N+ISGEHVLFLASFHNND TLSQFQVMICLLQ F+ESLTVVLPYYP GTMERV KEG V
Sbjct: 84 YRIIAADEHESMAGKMEEIYPDRFTFHKTSWGKFPDGTDNIEIGGFTPHNLISGEHVLFLASFHNNDSTLSQFQVMICLLQSFIESLTVVLPYYPVGTMERVTKEGIV 191
BLAST of mRNA_H-elongata_contig109779.789.1 vs. uniprot
Match: A0A7S4R782_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R782_9STRA) HSP 1 Score: 180 bits (456), Expect = 3.200e-53 Identity = 85/115 (73.91%), Postives = 100/115 (86.96%), Query Frame = 1
Query: 7 NRRSQHRYQIVAAEAMEGMARRLEELHPDRFRFHKTSWAKFPDGTDNIEIGGFTPYNVISGEHVLFLASFHNNDVTLSQFQVMICLLQYFVESLTVVLPYYPTGTMERVIKEGQV 351
++R +Y+I++AEA E MA+R+EE HPDRF FH T W+KFPDGTDNIEIGGF P+N++SGEHVLFLASFHNNDVT+SQFQV+I LLQ FVESLT+VLPYYP GTMERV KEG V
Sbjct: 63 SKRQSMQYRIISAEACETMAKRIEEAHPDRFTFHPTKWSKFPDGTDNIEIGGFHPHNLLSGEHVLFLASFHNNDVTMSQFQVIIVLLQSFVESLTIVLPYYPVGTMERVTKEGTV 177
BLAST of mRNA_H-elongata_contig109779.789.1 vs. uniprot
Match: A0A7S3DQJ1_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DQJ1_9STRA) HSP 1 Score: 178 bits (452), Expect = 2.600e-52 Identity = 86/114 (75.44%), Postives = 97/114 (85.09%), Query Frame = 1
Query: 10 RRSQHRYQIVAAEAMEGMARRLEELHPDRFRFHKTSWAKFPDGTDNIEIGGFTPYNVISGEHVLFLASFHNNDVTLSQFQVMICLLQYFVESLTVVLPYYPTGTMERVIKEGQV 351
RR YQI+AA+ E MA+R+EE +PDRF FH T W KFPDGTD IEIGGF P+N++SGEHVLFLASFHNNDVTLSQFQVMICLLQ F+ESLTVVLP+ P GTMERVI+EGQV
Sbjct: 84 RRESIHYQIIAAKETEAMAKRMEESYPDRFTFHPTQWEKFPDGTDQIEIGGFYPHNLLSGEHVLFLASFHNNDVTLSQFQVMICLLQSFIESLTVVLPFSPVGTMERVIREGQV 197
BLAST of mRNA_H-elongata_contig109779.789.1 vs. uniprot
Match: A0A7S2R758_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R758_9STRA) HSP 1 Score: 176 bits (446), Expect = 8.470e-52 Identity = 83/112 (74.11%), Postives = 95/112 (84.82%), Query Frame = 1
Query: 16 SQHRYQIVAAEAMEGMARRLEELHPDRFRFHKTSWAKFPDGTDNIEIGGFTPYNVISGEHVLFLASFHNNDVTLSQFQVMICLLQYFVESLTVVLPYYPTGTMERVIKEGQV 351
S+ RYQI++AE E MA LE +P+RF FHKTSW KFPDGTDNIE+GGFTP+NVI+GE VLFLASFHNNDVTLSQFQVM+ LLQ F++ L VVLPYYP GTMER +KEGQV
Sbjct: 64 SRKRYQIISAEIWEDMALNLEATYPERFHFHKTSWGKFPDGTDNIEVGGFTPHNVIAGERVLFLASFHNNDVTLSQFQVMVMLLQSFIDELVVVLPYYPVGTMERTVKEGQV 175
BLAST of mRNA_H-elongata_contig109779.789.1 vs. uniprot
Match: W7TDA8_9STRA (Phosphoribosyltransferase n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TDA8_9STRA) HSP 1 Score: 176 bits (445), Expect = 4.420e-51 Identity = 83/111 (74.77%), Postives = 96/111 (86.49%), Query Frame = 1
Query: 19 QHRYQIVAAEAMEGMARRLEELHPDRFRFHKTSWAKFPDGTDNIEIGGFTPYNVISGEHVLFLASFHNNDVTLSQFQVMICLLQYFVESLTVVLPYYPTGTMERVIKEGQV 351
+ RYQI+AA E MARRL+ +P+RFRFH T W KFPDGTDNIE+GGF P+NV++GEHVLFLASFHNNDVTLSQFQVM+ LLQ F+ESLT+VLP+YP GTMERV KEGQV
Sbjct: 122 ERRYQIIAAPVCEPMARRLQIQYPERFRFHPTYWGKFPDGTDNIEVGGFQPHNVMAGEHVLFLASFHNNDVTLSQFQVMVMLLQSFIESLTIVLPFYPVGTMERVSKEGQV 232
BLAST of mRNA_H-elongata_contig109779.789.1 vs. uniprot
Match: A0A7S2UY42_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY42_9STRA) HSP 1 Score: 173 bits (438), Expect = 6.270e-51 Identity = 85/113 (75.22%), Postives = 94/113 (83.19%), Query Frame = 1
Query: 13 RSQHRYQIVAAEAMEGMARRLEELHPDRFRFHKTSWAKFPDGTDNIEIGGFTPYNVISGEHVLFLASFHNNDVTLSQFQVMICLLQYFVESLTVVLPYYPTGTMERVIKEGQV 351
R RYQI+AA+A E +A +LE +P+ FRFH T W KFPDGTD IE+GGF P NVISG HVLFLASFHNNDVTLSQFQVM+ LLQ FVESLTVVLPYYPTGTMERV +EGQV
Sbjct: 30 RENRRYQIIAAKAFEELAEQLERNYPNEFRFHPTLWDKFPDGTDKIEVGGFQPNNVISGSHVLFLASFHNNDVTLSQFQVMVMLLQSFVESLTVVLPYYPTGTMERVTQEGQV 142
BLAST of mRNA_H-elongata_contig109779.789.1 vs. uniprot
Match: A0A7S1ZH29_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZH29_TRICV) HSP 1 Score: 169 bits (427), Expect = 6.070e-50 Identity = 80/96 (83.33%), Postives = 87/96 (90.62%), Query Frame = 1
Query: 64 ARRLEELHPDRFRFHKTSWAKFPDGTDNIEIGGFTPYNVISGEHVLFLASFHNNDVTLSQFQVMICLLQYFVESLTVVLPYYPTGTMERVIKEGQV 351
A+R+EE +PDRF FH T W KFPDGTD+IEIGGFTP+N++SGEHVLFLASFHNNDVTLSQFQVMICLLQ FVESLTVVLPYYP GTMERV KEG V
Sbjct: 1 AQRMEENYPDRFSFHPTKWGKFPDGTDSIEIGGFTPHNLLSGEHVLFLASFHNNDVTLSQFQVMICLLQSFVESLTVVLPYYPVGTMERVTKEGTV 96 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109779.789.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig109779.789.1 >prot_H-elongata_contig109779.789.1 ID=prot_H-elongata_contig109779.789.1|Name=mRNA_H-elongata_contig109779.789.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=117bp NENRRSQHRYQIVAAEAMEGMARRLEELHPDRFRFHKTSWAKFPDGTDNIback to top mRNA from alignment at H-elongata_contig109779:78..1273- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig109779.789.1 ID=mRNA_H-elongata_contig109779.789.1|Name=mRNA_H-elongata_contig109779.789.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1196bp|location=Sequence derived from alignment at H-elongata_contig109779:78..1273- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig109779:78..1273- >mRNA_H-elongata_contig109779.789.1 ID=mRNA_H-elongata_contig109779.789.1|Name=mRNA_H-elongata_contig109779.789.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=702bp|location=Sequence derived from alignment at H-elongata_contig109779:78..1273- (Himanthalia elongata Himel1 dioecious)back to top |