prot_H-elongata_contig10976.785.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10976.785.1
Unique Nameprot_H-elongata_contig10976.785.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length642
Homology
BLAST of mRNA_H-elongata_contig10976.785.1 vs. uniprot
Match: A0A6H5JFG3_9PHAE (Protein kinase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG3_9PHAE)

HSP 1 Score: 293 bits (750), Expect = 3.780e-82
Identity = 290/800 (36.25%), Postives = 352/800 (44.00%), Query Frame = 0
Query:    7 RAQGTQAAKVMAVGGSRVSSTETASGSSTTETT--EGRVFS-----DALPANARRRQFTAQHSLRRQGTYNAFAADVWAAGVCLWVFRFGTPPFYDPDPSNLFLEICRQPLMFPENVGEGDQEVLEKEAARAQQAAILALAVAKVGEFWVDRAFAFFVAAAVALKHGRGWGE----EDPVITMEWCFRGIQIPEDGEFDDDADLQSPGQLPALG-QSHRGGKNNKTRSNGVKSRSTASSSTTVAAQPLSRNQPIRVILRERDADRVS----------------------------------DGVRVVPEKKKHVSKTFDLLSTPP-PKGRSATSPPERDWLRRPRSDGSRRASLERGRDNDRDSNMDRGAPCSS--SPFTSKHTASSSCSSLGRKPHKXXXXXXXXXXXXXXXXXSVSEGYAPVPLPSS-------------------------------------------------------------------------------------------------------------------------VGSSADGCDXXXXXXXRAGYGRSVSSPVMMREDAFSSAEIRG------VGSATRSGEGPRAIGDTIDFGGDSGSSGGGGARGRDVGGNNKHSGTLENLLGALLNKSVSERITVREAQEHPWMTRMCSRRGDNGAG---ERAGAKRSAFHKPFKQVVSVTEGEVKGAIVQINSLFIISMVKSRLTQRLTRARKNIARRRRQATTGAKYGPSLSDTEQDHLREVRDLTEALTKDESTLVHHDLANEPERSVR 627
            RA+G +AAK +A+G S VSS  +   S  T +   EG VFS     + L         + +HSL+RQGTYNAFAADVWAAGVCLWVFRFGTPPFY+ DPSNLF+EIC+QPL+FP +V EGD+EVL++EA  A                                            +D V       R IQ+PEDG+ + D D+ SPGQLPALG +   GG++    S G  +       +T    P  ++  + V LR   +                                      DG+          +KT D +  PP PK R  T PP++ W  R  S G+   S      N+R    D GA   S  S   S+H ++SS  S                        + S  +A V LP +                                                                                                                                  XXXXXXX A   RSVSSP+M+R++ FSSAEI G       GS T   + P A                               GTL NLL +LL+K+VSER TVREAQEHPWM RM SR+G  GAG      G +R     PFKQV SVT GEVKGAIV INSLF+ISMVKSRLTQRLTRARKNIARRR+QATTG KYGPSLSDTEQ+ LREVR+LTEALTKDE+ L++HDLANEPERSVR
Sbjct:  233 RAKGAEAAKALALG-SGVSSEPSPLTSMKTPSPIMEGEVFSTDSNGNGLDGXXXXXXXSGRHSLQRQGTYNAFAADVWAAGVCLWVFRFGTPPFYNTDPSNLFVEICQQPLLFPRSVDEGDEEVLKQEAKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDVPKPPPSLRPIQMPEDGDTEVD-DMISPGQLPALGSRQFGGGRDFDDGSGGGGTHVPNGRGSTRRVDP--KSPAVHVPLRRSHSSSXXXXXXXXXXXXXXXRARRSVWDTGSXXXXXXXXGMDGIE------HRGTKTPDTVEVPPTPKSR--TIPPDQGWFGRRPSSGNNNHS------NNRPQRSDSGASDKSAWSAARSRHGSASSALSXXAD-------------------AATSVVHAAVGLPLAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPPTRSVSSPLMVRDEMFSSAEITGRRRIGGTGSGTVGEKDPAAAAAAA-----------------------ATPGTLRNLLSSLLHKNVSERATVREAQEHPWMQRMASRKGGGGAGLGDRGGGTRRGQQPMPFKQV-SVTAGEVKGAIVHINSLFVISMVKSRLTQRLTRARKNIARRRQQATTGDKYGPSLSDTEQEALREVRELTEALTKDEAVLINHDLANEPERSVR 971          
BLAST of mRNA_H-elongata_contig10976.785.1 vs. uniprot
Match: D7FNU8_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNU8_ECTSI)

HSP 1 Score: 290 bits (741), Expect = 3.520e-81
Identity = 269/650 (41.38%), Postives = 313/650 (48.15%), Query Frame = 0
Query:    7 RAQGTQAAKVMAVGGSRVSSTETASGSSTTETT--EGRVFS-----DALPANARRRQFTAQHSLRRQGTYNAFAADVWAAGVCLWVFRFGTPPFYDPDPSNLFLEICRQPLMFPENVGEGDQEVLEKEAARAQQAAILALAVAKVGEFWVDRAFAFFVAAAVALKHGRGWGEEDP----VITMEWCFRGIQIPEDGEFDDDADLQSPGQLPALGQSHRGGKNNKTRSNGVKSRSTASSSTTVAAQPLSRNQPIRVILRERDADRVSDGVRVVPEKKKHVSKTFDLLSTPPPKGRSATSPPERDWLRRPRSDGSRRASLERGRDNDRDSNMDRGAPCSSSPFTSKHTASSSCSSLGRKPHKXXXXXXXXXXXXXXXXXSVSEGYAPVPLPSSVGSSADGCDXXXXXXXRAGYGRSVSSPVMMREDAFSSAEIRG------VGSATRSGEGPRAIGDTIDFGGDSGSSGGGGARGRDVGGNNKHSGTLENLLGALLNKSVSERITVREAQEHPWMTRMCSRRGDNGAG--ERAGAKRSAFHKPFKQVVSVTEGEVKGAIVQINSLFIISMVKSRLTQRLTRARKNIARRRRQATTGAKYGPSLSDTEQDHLREVRDLTEALTKDESTLVHHDLANEPERSVRRFDRFKDANC 637
            RA+G +AAK +A+G S VSS  +   S TT +   EG VFS     + L  N R  Q + +HSL+RQGTYNAFAADVWAAGVCLWVFRFGTPPFY+ DPSNLF+EICRQPL+FP +V EGD+EVL++EA  A                                               V       R IQIPEDG+ + D  ++                                                                  +P +  H+              RS TS                                  G   S+   T                  XXXXXXXXXXXXXXXXX                       XXXXXXX+A   RSVSSP+M+R++ FSSAEI G       GS T   + P A                               GTL NLL +LL+K VSER TVREAQEHPWM RM SR+G +GAG   R G  R     PFKQV SVT GEVKGAIV INSLF+ISMVKSRLTQRLTRARKNIARRR+QATTG +YGPSLSDTEQ+HLREVR+LTEALTKDE+ L++HDLANEPERS+   D    A C
Sbjct:  278 RAKGAEAAKALALG-SGVSSEPSPLNSMTTPSPIMEGEVFSTDSNGNGLDGNGRASQGSERHSLQRQGTYNAFAADVWAAGVCLWVFRFGTPPFYNTDPSNLFVEICRQPLLFPRSVDEGDEEVLKQEAKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXVPKPPPSLRPIQIPEDGDAEVDDMIRGXXXXXXX-----------------------------------------XXXXXXXXXXXXXXXXXLPRRSSHL--------------RSDTS----------------------------------GGMVSTIAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAPPTRSVSSPLMIRDEMFSSAEITGRRRMGGTGSGTVGEKDPAAAAAAA-----------------------ATPGTLRNLLSSLLHKKVSERTTVREAQEHPWMRRMASRKGGDGAGLDGRGGGTRRGQPPPFKQV-SVTAGEVKGAIVHINSLFVISMVKSRLTQRLTRARKNIARRRQQATTGDRYGPSLSDTEQEHLREVRELTEALTKDEAVLINHDLANEPERSLSDSD-LPTATC 812          
BLAST of mRNA_H-elongata_contig10976.785.1 vs. uniprot
Match: A0A835ZD22_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD22_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 5.480e-5
Identity = 24/44 (54.55%), Postives = 28/44 (63.64%), Query Frame = 0
Query:   75 DVWAAGVCLWVFRFGTPPFYDPDPSNLFLEICRQPLMFPENVGE 118
            DVWA GVCLW F +GT PFY  DP+ LF EI   P  +P+   E
Sbjct:  297 DVWAVGVCLWCFLYGTLPFYHKDPAKLFEEIRHAPFRYPKEPEE 340          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10976.785.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JFG3_9PHAE3.780e-8236.25Protein kinase domain-containing protein (Fragment... [more]
D7FNU8_ECTSI3.520e-8141.38Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A835ZD22_9STRA5.480e-554.55Kinase-like domain-containing protein n=1 Tax=Trib... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 557..577
NoneNo IPR availableGENE3D1.10.510.10coord: 6..139
e-value: 1.4E-10
score: 42.7
NoneNo IPR availablePANTHERPTHR24346MAP/MICROTUBULE AFFINITY-REGULATING KINASEcoord: 57..130
IPR011009Protein kinase-like domain superfamilySUPERFAMILY56112Protein kinase-like (PK-like)coord: 71..505

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10976contigH-elongata_contig10976:1966..7006 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10976.785.1mRNA_H-elongata_contig10976.785.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10976 150..8683 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10976.785.1 ID=prot_H-elongata_contig10976.785.1|Name=mRNA_H-elongata_contig10976.785.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=642bp
MEAVRRRAQGTQAAKVMAVGGSRVSSTETASGSSTTETTEGRVFSDALPA
NARRRQFTAQHSLRRQGTYNAFAADVWAAGVCLWVFRFGTPPFYDPDPSN
LFLEICRQPLMFPENVGEGDQEVLEKEAARAQQAAILALAVAKVGEFWVD
RAFAFFVAAAVALKHGRGWGEEDPVITMEWCFRGIQIPEDGEFDDDADLQ
SPGQLPALGQSHRGGKNNKTRSNGVKSRSTASSSTTVAAQPLSRNQPIRV
ILRERDADRVSDGVRVVPEKKKHVSKTFDLLSTPPPKGRSATSPPERDWL
RRPRSDGSRRASLERGRDNDRDSNMDRGAPCSSSPFTSKHTASSSCSSLG
RKPHKHKHHHHQHTHQRHAPSRSVSEGYAPVPLPSSVGSSADGCDGGGGG
GGRAGYGRSVSSPVMMREDAFSSAEIRGVGSATRSGEGPRAIGDTIDFGG
DSGSSGGGGARGRDVGGNNKHSGTLENLLGALLNKSVSERITVREAQEHP
WMTRMCSRRGDNGAGERAGAKRSAFHKPFKQVVSVTEGEVKGAIVQINSL
FIISMVKSRLTQRLTRARKNIARRRRQATTGAKYGPSLSDTEQDHLREVR
DLTEALTKDESTLVHHDLANEPERSVRRFDRFKDANCGRVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom_sf