prot_H-elongata_contig109749.783.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig109749.783.1
Unique Nameprot_H-elongata_contig109749.783.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length41
Homology
BLAST of mRNA_H-elongata_contig109749.783.1 vs. uniprot
Match: D7FHB8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHB8_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 3.990e-15
Identity = 33/39 (84.62%), Postives = 36/39 (92.31%), Query Frame = 0
Query:    3 VRLCEKRDVEKWLTTKALKANGLWRLGKFDEGLRLCFEV 41
            VRLCEKRDVE+WLTTKALKANGLWRLGK+DE L LC +V
Sbjct:   32 VRLCEKRDVERWLTTKALKANGLWRLGKYDEALELCLDV 70          
BLAST of mRNA_H-elongata_contig109749.783.1 vs. uniprot
Match: A0A6H5L125_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L125_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 7.450e-15
Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = 0
Query:    3 VRLCEKRDVEKWLTTKALKANGLWRLGKFDEGLRLCFEV 41
            VRLCEKRDVE+WLTTKALKANGLWRLGK+DE L LC  V
Sbjct:   28 VRLCEKRDVERWLTTKALKANGLWRLGKYDEALELCLHV 66          
BLAST of mRNA_H-elongata_contig109749.783.1 vs. uniprot
Match: W7T2L8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T2L8_9STRA)

HSP 1 Score: 45.8 bits (107), Expect = 2.750e-5
Identity = 19/41 (46.34%), Postives = 29/41 (70.73%), Query Frame = 0
Query:    1 LQVRLCEKRDVEKWLTTKALKANGLWRLGKFDEGLRLCFEV 41
            + ++LC K+D+E+W   K LKA+ L R+G+ +E L LC EV
Sbjct:   24 MAIKLCGKKDMERWDIVKTLKAHALERMGRVEEALDLCREV 64          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109749.783.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FHB8_ECTSI3.990e-1584.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L125_9PHAE7.450e-1584.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7T2L8_9STRA2.750e-546.34Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig109749contigH-elongata_contig109749:2056..2178 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig109749.783.1mRNA_H-elongata_contig109749.783.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig109749 2056..2178 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig109749.783.1 ID=prot_H-elongata_contig109749.783.1|Name=mRNA_H-elongata_contig109749.783.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=41bp
LQVRLCEKRDVEKWLTTKALKANGLWRLGKFDEGLRLCFEV
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