mRNA_H-elongata_contig109649.780.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig109649.780.1 vs. uniprot
Match: D8LG17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG17_ECTSI) HSP 1 Score: 358 bits (919), Expect = 1.680e-122 Identity = 170/212 (80.19%), Postives = 187/212 (88.21%), Query Frame = 1
Query: 1 QGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILERCPQAEHAWPFGMVLKGPLPHGRDFLRFAKFGLLQYSVIKPLAATVALILASQGLYKEGDFSVYGGWLYLSLAVNLSVCYAFYCLGMFYYVLKAPLKPFDPVPKFLCIKAVLFLSYWQARHTTRAGKNAIVIAGLSRLNLIHAMG 636
QGKI+GILWMVPIYA+DSFVSLRFK+ A YVD LRDCYEGYALYLFLALMVGYLGDGDEYKVVDILE+CP ++HAWPFG+V+KGP+PHGRDFLRFAKFG LQYS +KPLAA VAL+LA GL++EGDFS+YGGWLY+S VNLSVCYAFYCLGMFYYVLK PLKPFDPVPKFLCIKAVLFLS+WQ IVIAGL +LNLIH MG
Sbjct: 41 QGKIIGILWMVPIYAIDSFVSLRFKNTAPYVDMLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILEQCPSSKHAWPFGLVMKGPMPHGRDFLRFAKFGTLQYSCVKPLAAFVALVLAPFGLFQEGDFSIYGGWLYISFVVNLSVCYAFYCLGMFYYVLKTPLKPFDPVPKFLCIKAVLFLSFWQG----------IVIAGLVKLNLIHEMG 242
BLAST of mRNA_H-elongata_contig109649.780.1 vs. uniprot
Match: A0A6H5JER3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JER3_9PHAE) HSP 1 Score: 357 bits (915), Expect = 2.190e-120 Identity = 169/212 (79.72%), Postives = 187/212 (88.21%), Query Frame = 1
Query: 1 QGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILERCPQAEHAWPFGMVLKGPLPHGRDFLRFAKFGLLQYSVIKPLAATVALILASQGLYKEGDFSVYGGWLYLSLAVNLSVCYAFYCLGMFYYVLKAPLKPFDPVPKFLCIKAVLFLSYWQARHTTRAGKNAIVIAGLSRLNLIHAMG 636
QGKI+GILWMVPIYA+DSFVSLRF++ A YVD LRDCYEGYALYLFLALMVGYLGDGDEYKVVDILE+CP ++HAWPFG+V+KGP+PHGRDFLRFAKFG LQYS +KPLAA VAL+LA GL++EGDFS+YGGWLY+S VNLSVCYAFYCLGMFYYVLK PLKPFDPVPKFLCIKAVLFLS+WQ IVIAGL +LNLIH MG
Sbjct: 41 QGKIIGILWMVPIYAIDSFVSLRFRNTAPYVDMLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILEQCPSSKHAWPFGLVMKGPMPHGRDFLRFAKFGTLQYSCVKPLAAFVALVLAPFGLFQEGDFSIYGGWLYISFVVNLSVCYAFYCLGMFYYVLKTPLKPFDPVPKFLCIKAVLFLSFWQVC--------GIVIAGLVKLNLIHEMG 244
BLAST of mRNA_H-elongata_contig109649.780.1 vs. uniprot
Match: A0A7S2UV50_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV50_9STRA) HSP 1 Score: 256 bits (654), Expect = 2.210e-81 Identity = 120/212 (56.60%), Postives = 154/212 (72.64%), Query Frame = 1
Query: 1 QGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILERCPQAEHAWPFGMVLKGPLPHGRDFLRFAKFGLLQYSVIKPLAATVALILASQGLYKEGDFSVYGGWLYLSLAVNLSVCYAFYCLGMFYYVLKAPLKPFDPVPKFLCIKAVLFLSYWQARHTTRAGKNAIVIAGLSRLNLIHAMG 636
Q K+VGILWM PIYA DS+VSLRFKD A+Y D LRDCYEGY LYLFLAL++ Y+G G+E++VV E P+ EH +PF ++ +GP+PHG+ FLR+ KFG LQYS +KP+ A+++ G Y EGDF+ GW+Y++ N SV +AFYCLGMFY VLK L PFDPVPKFLC+K VLFLS+WQ+ +VIAGL +L +I +G
Sbjct: 47 QSKVVGILWMTPIYAFDSWVSLRFKDWAIYFDMLRDCYEGYVLYLFLALLIAYVGRGNEFEVVRACEAAPRVEHVFPFNLMFRGPVPHGKSFLRWCKFGTLQYSALKPVTTVFAVLMRLVGRYHEGDFNPTYGWVYVTTITNFSVIWAFYCLGMFYVVLKKSLAPFDPVPKFLCVKMVLFLSFWQS----------VVIAGLVKLGIITDLG 248
BLAST of mRNA_H-elongata_contig109649.780.1 vs. uniprot
Match: A0A835Z2Y7_9STRA (Organic solute transporter subunit alpha/Transmembrane protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Y7_9STRA) HSP 1 Score: 243 bits (619), Expect = 5.520e-77 Identity = 124/212 (58.49%), Postives = 152/212 (71.70%), Query Frame = 1
Query: 1 QGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILERCPQAEHAWPFGMVLKGPLPHGRDFLRFAKFGLLQYSVIKPLAATVALILASQGLYKEGDFSVYGGWLYLSLAVNLSVCYAFYCLGMFYYVLKAPLKPFDPVPKFLCIKAVLFLSYWQARHTTRAGKNAIVIAGLSRLNLIHAMG 636
Q KIVGILWMVPIYAV S++ LRFKDAA ++ +RDCYEGYALYLFLALMV YLG GDE +VV +LE + +P ++ LP G FLR+AK G LQYSVIKP A +AL+L+ G +KEGDF GW++L++ +N SV AFY L FY +LK PL PF PVPKFLCIKAVLFLS+WQ +V+AGL+RL+LIHA+G
Sbjct: 39 QSKIVGILWMVPIYAVSSWLGLRFKDAAPTLNMMRDCYEGYALYLFLALMVAYLGGGDERRVVALLETRKPMKTTFPMSLLFGKELPQGEQFLRWAKLGTLQYSVIKPSCAMMALVLSLMGRFKEGDFDPRKGWVWLTIIINASVAVAFYSLVAFYVMLKEPLAPFKPVPKFLCIKAVLFLSFWQG----------VVVAGLARLHLIHAIG 240
BLAST of mRNA_H-elongata_contig109649.780.1 vs. uniprot
Match: W7TCG7_9STRA (Transmembrane protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCG7_9STRA) HSP 1 Score: 238 bits (608), Expect = 3.130e-73 Identity = 121/213 (56.81%), Postives = 151/213 (70.89%), Query Frame = 1
Query: 1 QGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILERCPQAEHAWPFGMVLKG-PLPHGRDFLRFAKFGLLQYSVIKPLAATVALILASQGLYKEGDFSVYGGWLYLSLAVNLSVCYAFYCLGMFYYVLKAPLKPFDPVPKFLCIKAVLFLSYWQARHTTRAGKNAIVIAGLSRLNLIHAMG 636
Q KIVGILWMVPIY+V S++SL FK ALY+D RDCYE Y LYLFLAL+V YLGDG+E +VV +L+ P+ +H PF + L G +PHG DFLRF KFG +QY V+KP A+ILA+ GLY EG F++ W+Y +L +N+SV YAFYCLG+FY +L PL+ +PVPKFLCIKAVLFLS+WQ +VIA L RL L+ G
Sbjct: 40 QSKIVGILWMVPIYSVQSWLSLSFKRYALYLDMFRDCYEAYVLYLFLALLVAYLGDGEEERVVALLQHQPRVKHIMPFKLCLGGGEVPHGADFLRFCKFGTMQYIVLKPACTLAAVILAACGLYGEGSFALNRFWIYQTLIMNVSVGYAFYCLGLFYVLLHGPLEAHNPVPKFLCIKAVLFLSFWQG----------VVIAALVRLGLLPHFG 242
BLAST of mRNA_H-elongata_contig109649.780.1 vs. uniprot
Match: A0A7S3XW93_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XW93_HETAK) HSP 1 Score: 237 bits (604), Expect = 1.070e-72 Identity = 114/212 (53.77%), Postives = 149/212 (70.28%), Query Frame = 1
Query: 1 QGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILERCPQAEHAWPFGMVLKGPLPHGRDFLRFAKFGLLQYSVIKPLAATVALILASQGLYKEGDFSVYGGWLYLSLAVNLSVCYAFYCLGMFYYVLKAPLKPFDPVPKFLCIKAVLFLSYWQARHTTRAGKNAIVIAGLSRLNLIHAMG 636
Q KIVGILWMVPIYA DS++SLRF+ AALY+D LRD YEGY LYLFLAL + YLG G++Y+++ + P EH WPF +V +G +P G +F+RF K G LQYSV+KP+ +AL L ++EG+F + GWL+ + N+SV +AFYCLG+FY LK L P+DP+PKFLCIKA+LFL +WQ + IA L+R+ LIH MG
Sbjct: 92 QSKIVGILWMVPIYAFDSWISLRFRQAALYLDMLRDVYEGYVLYLFLALCIAYLGRGNDYEILKYCQLPPGLEHPWPFRLVCRGGVPTGENFVRFCKLGTLQYSVMKPILTMMALSLKLSNNFEEGNFGLTSGWLWTVMLNNISVVWAFYCLGVFYIGLKKALAPYDPIPKFLCIKAILFLCFWQG----------LAIALLTRMGLIHEMG 293
BLAST of mRNA_H-elongata_contig109649.780.1 vs. uniprot
Match: A0A5D6Y6C0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6C0_9STRA) HSP 1 Score: 233 bits (594), Expect = 1.300e-72 Identity = 119/212 (56.13%), Postives = 147/212 (69.34%), Query Frame = 1
Query: 1 QGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILERCPQAEHAWPFGMVLKGPLPHGRDFLRFAKFGLLQYSVIKPLAATVALILASQGLYKEGDFSVYGGWLYLSLAVNLSVCYAFYCLGMFYYVLKAPLKPFDPVPKFLCIKAVLFLSYWQARHTTRAGKNAIVIAGLSRLNLIHAMG 636
Q KIVGILWMVPIYA DS++SLRFKDAALY+D +RD YEGY +YLFLALM+ YLGDG E +VV+IL P H +PF P+ G F+R K +Q+ V+KPL + VA++L G+Y +G FS G+LY SL VN S+ YAFY L +FY L PLKPF+PVPKFLCIKAVLFLS+WQ+ +V+A LSR LIH +G
Sbjct: 57 QSKIVGILWMVPIYATDSWLSLRFKDAALYLDLMRDSYEGYVIYLFLALMIAYLGDGSEERVVEILRSLPDMPHPYPFSKWC-APVKLGAAFIRDCKLATMQFVVLKPLMSLVAIVLELNGVYNQGSFSAATGYLYTSLVVNASITYAFYYLVLFYLALGEPLKPFNPVPKFLCIKAVLFLSFWQS----------VVLAFLSRFQLIHEVG 257
BLAST of mRNA_H-elongata_contig109649.780.1 vs. uniprot
Match: A0A8K1CG08_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CG08_PYTOL) HSP 1 Score: 232 bits (591), Expect = 7.750e-72 Identity = 119/212 (56.13%), Postives = 149/212 (70.28%), Query Frame = 1
Query: 1 QGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILERCPQAEHAWPFGMVLKGPLPHGRDFLRFAKFGLLQYSVIKPLAATVALILASQGLYKEGDFSVYGGWLYLSLAVNLSVCYAFYCLGMFYYVLKAPLKPFDPVPKFLCIKAVLFLSYWQARHTTRAGKNAIVIAGLSRLNLIHAMG 636
Q KIVGILWMVPIYA DS++SLRFKDAALY+D +RD YEGY +YLFLALM+ YLGDG KVV +L R P H +PF L P+ G +FLR K +Q+ V+KPL A A++L G+Y +G+FSV G+LY+SL VN S+ YAFY L +FY L LKP++PVPKFLCIKAVLFLS+WQ+ +V+A LSR +IH +G
Sbjct: 58 QSKIVGILWMVPIYATDSWLSLRFKDAALYLDLMRDSYEGYVIYLFLALMIAYLGDGSNEKVVAVLNRLPDLPHPFPFNRWLS-PIRMGPEFLRDCKMATMQFVVLKPLMAFFAIVLQVYGVYDQGNFSVTKGYLYISLVVNASITYAFYYLVLFYLALGDHLKPYNPVPKFLCIKAVLFLSFWQS----------VVLAFLSRFQIIHEIG 258
BLAST of mRNA_H-elongata_contig109649.780.1 vs. uniprot
Match: K3X8Z4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8Z4_GLOUD) HSP 1 Score: 229 bits (585), Expect = 8.410e-71 Identity = 116/212 (54.72%), Postives = 146/212 (68.87%), Query Frame = 1
Query: 1 QGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILERCPQAEHAWPFGMVLKGPLPHGRDFLRFAKFGLLQYSVIKPLAATVALILASQGLYKEGDFSVYGGWLYLSLAVNLSVCYAFYCLGMFYYVLKAPLKPFDPVPKFLCIKAVLFLSYWQARHTTRAGKNAIVIAGLSRLNLIHAMG 636
Q KI+GILWMVPIYA DS++SLRFKDAALY+D +RD YEGY +YLFLALM+ YLG G KVV IL P H WPF P+ G +F+R K +Q+ V+KPL A +A++L +G+Y +G FSV G+LY SL VN S+ YAFY L +FY L LKP++PVPKFLCIKAVLFLS+WQ+ +V+A LSR +IH +G
Sbjct: 66 QSKIIGILWMVPIYATDSWLSLRFKDAALYLDLMRDSYEGYVIYLFLALMIAYLGGGSHEKVVQILRSLPDLSHPWPFNKWC-APIKMGPEFIRDCKMATMQFVVLKPLMAFLAIVLEIRGVYNQGSFSVTTGYLYTSLIVNTSITYAFYYLVLFYLALGDHLKPYNPVPKFLCIKAVLFLSFWQS----------VVLAFLSRFQIIHEVG 266
BLAST of mRNA_H-elongata_contig109649.780.1 vs. uniprot
Match: H3H3Y5_PHYRM (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=H3H3Y5_PHYRM) HSP 1 Score: 229 bits (584), Expect = 1.440e-70 Identity = 114/212 (53.77%), Postives = 145/212 (68.40%), Query Frame = 1
Query: 1 QGKIVGILWMVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILERCPQAEHAWPFGMVLKGPLPHGRDFLRFAKFGLLQYSVIKPLAATVALILASQGLYKEGDFSVYGGWLYLSLAVNLSVCYAFYCLGMFYYVLKAPLKPFDPVPKFLCIKAVLFLSYWQARHTTRAGKNAIVIAGLSRLNLIHAMG 636
Q KIVGILWM+PIYA DS++SLRFKDAALY+D +RD YEGY +YLFLALM+ YLG G +V+ I+ P EH WPF K P+ G FLR K +Q+ V+KP+ A VA++L G+Y +G+FS G+LY SL VN S+ YAFY L +FY L L P++PVPKFLCIKAVLFLS+WQ+ +V+A LSR +IH +G
Sbjct: 61 QSKIVGILWMIPIYATDSWLSLRFKDAALYLDLMRDSYEGYVIYLFLALMIAYLGGGSNERVITIMRGLPDLEHPWPFNRWCK-PIQMGPGFLRDCKMATMQFVVVKPMMAFVAIVLRINGMYDQGNFSAKKGYLYTSLIVNASITYAFYYLVLFYLALSTQLAPYNPVPKFLCIKAVLFLSFWQS----------VVLAFLSRFQIIHELG 261 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109649.780.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig109649.780.1 >prot_H-elongata_contig109649.780.1 ID=prot_H-elongata_contig109649.780.1|Name=mRNA_H-elongata_contig109649.780.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=206bp MVPIYAVDSFVSLRFKDAALYVDTLRDCYEGYALYLFLALMVGYLGDGDEback to top mRNA from alignment at H-elongata_contig109649:277..2037- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig109649.780.1 ID=mRNA_H-elongata_contig109649.780.1|Name=mRNA_H-elongata_contig109649.780.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1761bp|location=Sequence derived from alignment at H-elongata_contig109649:277..2037- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig109649:277..2037- >mRNA_H-elongata_contig109649.780.1 ID=mRNA_H-elongata_contig109649.780.1|Name=mRNA_H-elongata_contig109649.780.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1236bp|location=Sequence derived from alignment at H-elongata_contig109649:277..2037- (Himanthalia elongata Himel1 dioecious)back to top |