prot_H-elongata_contig10961.778.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10961.778.1
Unique Nameprot_H-elongata_contig10961.778.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length283
Homology
BLAST of mRNA_H-elongata_contig10961.778.1 vs. uniprot
Match: D7G6M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6M4_ECTSI)

HSP 1 Score: 333 bits (854), Expect = 4.680e-107
Identity = 181/296 (61.15%), Postives = 216/296 (72.97%), Query Frame = 0
Query:    1 VGTFVFRIYDASDPVDTLATSDAWQVNAQGKDVELSMRFVLKQLRNSDGKGSVMGALAQLTYLLAHLQARRISPPQRYNRSIGKAVWDAVTAARNQLNGVRIRSGSP------------EKNDTVVDKERKLRAVHVAVWCVLDTIICNPAAAALLVDAPLQPHP--MDPRGSSIPCVALCSLWQSTYCPFEERYYDSPQALAEHYKEDFAFMPSSLPLESVDPAVLHSLTDQMKVLLPKLLPSANFSEKRERVRARLEHVLLTQLPETMFPRGSGLRVFGSSSNGFGNDGADLDM 282
            VG+FVFRIYDASDPV TLATS AWQV+AQG+DVELS+RFVL QLR++DGKGSVMGALAQL++LL HL+    +PPQRYNRS+G A+W+AVT+AR QL GV++ S                  D+  D +RKLRAVH AVWCVL+ I+ NPAA ALL +AP Q  P  ++ +G+S+PCVA+C LWQ               ALA+HYK+DF F PS   LE +D AVL SLTDQM  LLP LLPS +F EKRE+VRA LE  L+ QLP+ M P+GS LRVFGSSSNGFGNDGADLDM
Sbjct:   75 VGSFVFRIYDASDPVGTLATSHAWQVDAQGRDVELSLRFVLNQLRSTDGKGSVMGALAQLSHLLGHLET---APPQRYNRSVGSALWNAVTSARKQLKGVKLTSSGKGXXXXXXXXXXNRDKDSAAD-DRKLRAVHGAVWCVLNAIVKNPAAGALLAEAPPQMDPFNINRKGASLPCVAVCRLWQ---------------ALAKHYKDDFGFTPSEARLEDIDQAVLSSLTDQMSALLPTLLPSPDFGEKREKVRASLERTLMKQLPK-MIPKGSTLRVFGSSSNGFGNDGADLDM 350          
BLAST of mRNA_H-elongata_contig10961.778.1 vs. uniprot
Match: A0A4D9DCB2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCB2_9STRA)

HSP 1 Score: 136 bits (342), Expect = 2.390e-32
Identity = 95/285 (33.33%), Postives = 145/285 (50.88%), Query Frame = 0
Query:    2 GTFVFRIYDASDPVDTLATSDAWQVNAQGKDVELSMRFVLKQLRNSDGKGSVMGALAQLTYLLAHLQARRISPPQRYNRSIGKAVWDAVTAARNQL-NGVRIRSGSPEKNDTVV---DKERKLRAVHVAVWCVLDTIICNPAAAALLVDAPLQPHPMDPRGSSIPCVALCSLWQSTYCPFEERYYDSPQALAEHYKEDFAFMPSSLPLESVDPAVLHSLTDQMKVLLPKLLPSANFSEKRERVRARLEHVLLTQLPETMFPRGSGLRVFGSSSNGFGNDGADLDM 282
            G FVFR++DA DPV T ATS  + V  +G+DVE ++R +  QL+    + +++  L+Q  +LL      R   P   +R +   +W  +  +  Q+ +G        E+ + +    DK R    V + V  VL   + N    + L  A ++                    Q+ +C F E +Y S      HY++ +      +P  S+ P V ++LT++++ LLP LLPS    + RE VRAR+E +L +Q P T FP G+ LRVFGSS+N FGND ADLDM
Sbjct:  699 GVFVFRLFDAKDPVRTHATSQVFLVEVRGRDVEGNLRLISSQLKE---RKTLVAGLSQYAFLL------RGMAPHAPSRQLQSLLWTCLLLSVQQIKDGAEEGGREGEEGEGIAGGSDKPRSRYPVIIGVAAVLQAALQNRFVLSCLEGAQVE---------------TLEEAQARWCLFNEEFYPSEADKLAHYRDQWGLAFRPVPPPSILPKVANALTEEIESLLPALLPSQACFQTRENVRARVEALLPSQGPTT-FPDGTRLRVFGSSANNFGNDAADLDM 958          
BLAST of mRNA_H-elongata_contig10961.778.1 vs. uniprot
Match: W7TXG0_9STRA (PAP/25A-associated n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXG0_9STRA)

HSP 1 Score: 128 bits (322), Expect = 9.810e-30
Identity = 92/285 (32.28%), Postives = 143/285 (50.18%), Query Frame = 0
Query:    2 GTFVFRIYDASDPVDTLATSDAWQVNAQGKDVELSMRFVLKQLRNSDGKGSVMGALAQLTYLLAHLQARRISPPQRYNRSIGKAVWDAVTAARNQL-NGVRIRSGSPEKNDTVV---DKERKLRAVHVAVWCVLDTIICNPAAAALLVDAPLQPHPMDPRGSSIPCVALCSLWQSTYCPFEERYYDSPQALAEHYKEDFAFMPSSLPLESVDPAVLHSLTDQMKVLLPKLLPSANFSEKRERVRARLEHVLLTQLPETMFPRGSGLRVFGSSSNGFGNDGADLDM 282
            G FVFR++DA DPV T ATS  + V  + ++VE ++R +  QL+    + +++  L+Q  +LL      R   P   +R +   +W  +  +  Q+ +G        ++ + +    DK R    V + V  VL   + N    + L  A                VA     Q+ +C F E +Y S      HY++ +      +P  S+ P V ++LT++++ LLP LLPS    + RE VR R+E +L ++ P T FP G+ LRVFGSS+N FGND ADLDM
Sbjct:  270 GVFVFRLFDAKDPVRTHATSQVFLVEVRDREVEGNLRLISSQLKE---RKTLVAGLSQFAFLL------RGMAPYAPSRQLQSLLWTCLQLSVQQIKDGAEEGGREGDEGEGIAGGSDKPRSRYPVIIGVAAVLHAALQNRFVLSCLEGAQ---------------VATLEEAQARWCLFNEEFYPSEADKLAHYRDQWGLAFRPVPPPSILPKVANALTEEIESLLPALLPSQACFQTRENVRERVEALLPSRGPTT-FPDGTRLRVFGSSANNFGNDAADLDM 529          
BLAST of mRNA_H-elongata_contig10961.778.1 vs. uniprot
Match: A0A7R9UEG6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEG6_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 3.920e-13
Identity = 58/172 (33.72%), Postives = 90/172 (52.33%), Query Frame = 0
Query:  117 ERKLRAVHVAVWCVLDTIICNP------AAAALLVDAPLQPHPMDPRGSSIPCVALCSLWQSTYCPFEERYYDSPQALAEHYKEDFAFMPSSLPLESVDPAVLHSLTDQMKVLLPKLLPSANFSEKRERVRARLEHVLLTQLPETMFPRGSGLRVFGSSSNGFGNDGADLDM 282
            +R  R +H A   +L T+  +P        A LL D  +Q          + C+ L       YCP  ER++++ +   +H+ E   F P    L+ +   V+  +  +++ LLP LLPS +F+EKRE +RARLE++L+        P GS L +FGSS+N FG D +D+DM
Sbjct:    8 DRSARQLHRAYGEMLKTLSQSPNQGQLPTLAQLLGDRLIQ---------ILKCLTL-------YCPIHERFFETVEKRRQHF-EKLGFEPRP-GLQGIHHGVVVRVQQEIEELLPSLLPSEDFAEKREALRARLENLLVES---GGVPPGSRLIIFGSSANNFGRDTSDMDM 158          
BLAST of mRNA_H-elongata_contig10961.778.1 vs. uniprot
Match: A0A6H5KFD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFD0_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 1.240e-10
Identity = 33/72 (45.83%), Postives = 43/72 (59.72%), Query Frame = 0
Query:  149 LQPHPMDPRGSSIPCVALCSLWQSTYCPFEERYYDSPQALAEHYKEDFAFMPSSLPLESVDPAVLHSLTDQM 220
            + P   + +G+S+PCVA+C LWQ               ALA+HYK+DF F PS   LE +D AVL SLTDQ+
Sbjct:    1 MDPFNTNRKGASLPCVAVCRLWQ---------------ALAKHYKDDFGFTPSEARLEDIDQAVLRSLTDQV 57          
BLAST of mRNA_H-elongata_contig10961.778.1 vs. uniprot
Match: A0A7S4A5C0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A5C0_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 5.210e-8
Identity = 62/193 (32.12%), Postives = 84/193 (43.52%), Query Frame = 0
Query:   92 AARNQLNGVRIRSGSPEKNDTVVDKERKLRAVHVAVWCVLDTIICNPAAAALLVDA-PLQPHPMDPRGSSIPCVALCSLWQSTYCPFEERYYDSPQALAEHY-KEDFAFMPSSLPLESVDPAVLHSLTDQMKVLLPKLLPSANFSEKRERVRARLEHVLLTQLPETMFPRGSGLRVFGSSSNGFGNDGADLDM 282
            AAR+     R+     ++ND     +R+ R VH A   +      N A+   L  A P Q   +D          + + W +    F     D   AL  HY + D  F P+  P          +L D    +LP+L PS NF ++RE VR R+E   L         R   LRVFGSS+N FG +GADLDM
Sbjct:  499 AARDAFEQQRVAKIKKQRND-----DRRARDVHAACRRLCAAFNGNSASRQWLESAAPEQARRLDD---------VSTRWDALLEEFWPGGADGVAALRRHYDRADSFFRPTHQPSAQQHGFAWRALDDACARVLPQLFPSENFFKRREEVRRRVE-ACLNNADVLGNGRRLVLRVFGSSANLFGAEGADLDM 676          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10961.778.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G6M4_ECTSI4.680e-10761.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A4D9DCB2_9STRA2.390e-3233.33Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TXG0_9STRA9.810e-3032.28PAP/25A-associated n=1 Tax=Nannochloropsis gaditan... [more]
A0A7R9UEG6_9STRA3.920e-1333.72Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A6H5KFD0_9PHAE1.240e-1045.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4A5C0_9STRA5.210e-832.12Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY81301Nucleotidyltransferasecoord: 212..282

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10961contigH-elongata_contig10961:5634..8899 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10961.778.1mRNA_H-elongata_contig10961.778.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10961 5634..8899 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10961.778.1 ID=prot_H-elongata_contig10961.778.1|Name=mRNA_H-elongata_contig10961.778.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=283bp
VGTFVFRIYDASDPVDTLATSDAWQVNAQGKDVELSMRFVLKQLRNSDGK
GSVMGALAQLTYLLAHLQARRISPPQRYNRSIGKAVWDAVTAARNQLNGV
RIRSGSPEKNDTVVDKERKLRAVHVAVWCVLDTIICNPAAAALLVDAPLQ
PHPMDPRGSSIPCVALCSLWQSTYCPFEERYYDSPQALAEHYKEDFAFMP
SSLPLESVDPAVLHSLTDQMKVLLPKLLPSANFSEKRERVRARLEHVLLT
QLPETMFPRGSGLRVFGSSSNGFGNDGADLDM*
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