prot_H-elongata_contig109605.777.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig109605.777.1
Unique Nameprot_H-elongata_contig109605.777.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length71
Homology
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BLAST of mRNA_H-elongata_contig109605.777.1 vs. uniprot
Match: D8LEK1_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK1_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 3.000e-16
Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = 0 
Query:   15 DRSKLSRALLWVVIMSPARPTTEINALCNSPKYHSRVVYYRGNVTNPRDMDAVCAE 70
            D    S   +WVV+M+PA P+ EI+ALC  PKY SRV+Y+RG+VTNPRDM AVCAE
Sbjct:  219 DDQTASNVSVWVVVMAPASPSEEISALCRQPKYRSRVIYFRGSVTNPRDMAAVCAE 274
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BLAST of mRNA_H-elongata_contig109605.777.1 vs. uniprot
Match: A0A6H5JQ48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ48_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 8.990e-16
Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = 0 
Query:   15 DRSKLSRALLWVVIMSPARPTTEINALCNSPKYHSRVVYYRGNVTNPRDMDAVCAE 70
            D  K     +WV+IM+PA P+ EI ALC  PKY SRV+Y+RG+VTNPRDM AVCAE
Sbjct:  321 DDQKSINVSVWVIIMAPASPSEEITALCRQPKYRSRVIYFRGSVTNPRDMAAVCAE 376
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BLAST of mRNA_H-elongata_contig109605.777.1 vs. uniprot
Match: A0A6H5K4I5_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4I5_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 6.060e-10
Identity = 27/47 (57.45%), Postives = 38/47 (80.85%), Query Frame = 0 
Query:   24 LWVVIMSPARPTTEINALCNSPKYHSRVVYYRGNVTNPRDMDAVCAE 70
            LWVVIMSP+ P+ E+ ++  SP + SRV+Y+RG+V +P DM+AVCAE
Sbjct:  325 LWVVIMSPSSPSPEVLSVIRSPLFMSRVIYFRGSVMDPLDMNAVCAE 371
[Close]
BLAST of mRNA_H-elongata_contig109605.777.1 vs. uniprot
Match: D7FXB0_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXB0_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 6.980e-10
Identity = 27/47 (57.45%), Postives = 38/47 (80.85%), Query Frame = 0 
Query:   24 LWVVIMSPARPTTEINALCNSPKYHSRVVYYRGNVTNPRDMDAVCAE 70
            LWVVIMSP+ P+ E+ ++  SP + SRV+Y+RG+V +P DM+AVCAE
Sbjct:  284 LWVVIMSPSPPSPEVLSVIRSPLFMSRVIYFRGSVMDPLDMNAVCAE 330
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109605.777.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LEK1_ECTSI3.000e-1662.50Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JQ48_9PHAE8.990e-1662.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4I5_9PHAE6.060e-1057.45Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FXB0_ECTSI6.980e-1057.45Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig109605contigH-elongata_contig109605:461..673 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig109605.777.1mRNA_H-elongata_contig109605.777.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig109605 461..673 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig109605.777.1 ID=prot_H-elongata_contig109605.777.1|Name=mRNA_H-elongata_contig109605.777.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp
FSERRTELVYYMRQDRSKLSRALLWVVIMSPARPTTEINALCNSPKYHSR
VVYYRGNVTNPRDMDAVCAE*
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