mRNA_H-elongata_contig109469.768.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig109469.768.1 vs. uniprot
Match: D7FPS7_ECTSI (Phosphoserine phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS7_ECTSI) HSP 1 Score: 137 bits (346), Expect = 2.930e-38 Identity = 65/78 (83.33%), Postives = 71/78 (91.03%), Query Frame = 1
Query: 1 RVQAVCFDVDSTVIAEEGIDTLADFCGASKGVADLTKRAMGGSMPFQDALKARLDLMVPSKRTVELCVEEHPPRLSPG 234
R QAVCFDVDSTVIAEEGID LADFCGA++ VADLT RAMGGSMPFQDALKARLDLM PS++ V+LC+ EHPPRLSPG
Sbjct: 71 RAQAVCFDVDSTVIAEEGIDVLADFCGAAEAVADLTSRAMGGSMPFQDALKARLDLMTPSQKVVDLCLREHPPRLSPG 148
BLAST of mRNA_H-elongata_contig109469.768.1 vs. uniprot
Match: A0A835ZG36_9STRA (Phosphoserine phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG36_9STRA) HSP 1 Score: 111 bits (277), Expect = 2.530e-28 Identity = 52/76 (68.42%), Postives = 63/76 (82.89%), Query Frame = 1
Query: 7 QAVCFDVDSTVIAEEGIDTLADFCGASKGVADLTKRAMGGSMPFQDALKARLDLMVPSKRTVELCVEEHPPRLSPG 234
QAVCFDVDSTV EEGID LA FCGA++ VA++TK+AMGG+M FQDA++ RL+LM PS VE C+ EHPP+LSPG
Sbjct: 53 QAVCFDVDSTVCTEEGIDVLAGFCGAAEAVAEMTKKAMGGNMLFQDAIRMRLELMRPSTAIVERCLREHPPQLSPG 128
BLAST of mRNA_H-elongata_contig109469.768.1 vs. uniprot
Match: A0A7S2V4I9_9STRA (Phosphoserine phosphatase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4I9_9STRA) HSP 1 Score: 107 bits (268), Expect = 8.380e-27 Identity = 53/78 (67.95%), Postives = 61/78 (78.21%), Query Frame = 1
Query: 1 RVQAVCFDVDSTVIAEEGIDTLADFCGASKGVADLTKRAMGGSMPFQDALKARLDLMVPSKRTVELCVEEHPPRLSPG 234
AVCFDVDSTVI EEGID LA++CGA + VA+LT RAMGGSM FQDAL ARLDL+ PSK C+E+ PP+LSPG
Sbjct: 67 EADAVCFDVDSTVIQEEGIDVLAEYCGAGEKVAELTSRAMGGSMRFQDALAARLDLIRPSKADFLNCLEKQPPKLSPG 144
BLAST of mRNA_H-elongata_contig109469.768.1 vs. uniprot
Match: A0A251TYV9_HELAN (Phosphoserine phosphatase n=2 Tax=Helianthus annuus TaxID=4232 RepID=A0A251TYV9_HELAN) HSP 1 Score: 105 bits (262), Expect = 3.240e-26 Identity = 51/78 (65.38%), Postives = 61/78 (78.21%), Query Frame = 1
Query: 1 RVQAVCFDVDSTVIAEEGIDTLADFCGASKGVADLTKRAMGGSMPFQDALKARLDLMVPSKRTVELCVEEHPPRLSPG 234
+ AVCFDVDSTV +EGID LA+FCGA K VA+ T RAMGGS+PF++AL ARLDL PS TV+ +E+ PPRLSPG
Sbjct: 41 KADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLDLFKPSLSTVQDFLEKRPPRLSPG 118
BLAST of mRNA_H-elongata_contig109469.768.1 vs. uniprot
Match: A0A7S2D0K5_9STRA (Phosphoserine phosphatase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D0K5_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.150e-25 Identity = 50/76 (65.79%), Postives = 60/76 (78.95%), Query Frame = 1
Query: 7 QAVCFDVDSTVIAEEGIDTLADFCGASKGVADLTKRAMGGSMPFQDALKARLDLMVPSKRTVELCVEEHPPRLSPG 234
QAVCFDVDSTVI EEGID LA CGA + VA+LT +AMGG+M FQDAL ARLDL+ PS + C+ +HPP+L+PG
Sbjct: 40 QAVCFDVDSTVITEEGIDVLAAHCGAGEAVAELTAKAMGGTMLFQDALAARLDLIRPSMNDITDCLADHPPQLTPG 115
BLAST of mRNA_H-elongata_contig109469.768.1 vs. uniprot
Match: A0A804NK24_MAIZE (Uncharacterized protein n=1 Tax=Zea mays TaxID=4577 RepID=A0A804NK24_MAIZE) HSP 1 Score: 103 bits (256), Expect = 1.620e-25 Identity = 49/78 (62.82%), Postives = 60/78 (76.92%), Query Frame = 1
Query: 1 RVQAVCFDVDSTVIAEEGIDTLADFCGASKGVADLTKRAMGGSMPFQDALKARLDLMVPSKRTVELCVEEHPPRLSPG 234
AVCFDVDSTVI +EGID LADFCGA K VA+ T +AM G++PF++AL ARL L+ PS VE C+E+ PPR+SPG
Sbjct: 83 NADAVCFDVDSTVILDEGIDELADFCGAGKAVAEWTAKAMTGTVPFEEALAARLSLIKPSLSQVEECLEKRPPRISPG 160
BLAST of mRNA_H-elongata_contig109469.768.1 vs. uniprot
Match: A0A1J3EL61_NOCCA (Phosphoserine phosphatase, chloroplastic n=3 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3EL61_NOCCA) HSP 1 Score: 103 bits (258), Expect = 2.810e-25 Identity = 51/78 (65.38%), Postives = 60/78 (76.92%), Query Frame = 1
Query: 1 RVQAVCFDVDSTVIAEEGIDTLADFCGASKGVADLTKRAMGGSMPFQDALKARLDLMVPSKRTVELCVEEHPPRLSPG 234
V+AVCFDVDSTV +EGID LA+FCGA K VA+ T RAMGGS+PF++AL ARL L PS VE +E+ PPRLSPG
Sbjct: 82 NVEAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSKVEEFLEKRPPRLSPG 159
BLAST of mRNA_H-elongata_contig109469.768.1 vs. uniprot
Match: UPI0010A41D27 (phosphoserine phosphatase, chloroplastic-like n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A41D27) HSP 1 Score: 104 bits (259), Expect = 3.050e-25 Identity = 51/78 (65.38%), Postives = 58/78 (74.36%), Query Frame = 1
Query: 1 RVQAVCFDVDSTVIAEEGIDTLADFCGASKGVADLTKRAMGGSMPFQDALKARLDLMVPSKRTVELCVEEHPPRLSPG 234
AVCFDVDSTV EGID LADFCGA K VA+ T RAMGGS+PF++AL ARL L PS V+ C+E+ PPRLSPG
Sbjct: 107 NADAVCFDVDSTVCLGEGIDELADFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFSPSLSQVQDCLEQRPPRLSPG 184
BLAST of mRNA_H-elongata_contig109469.768.1 vs. uniprot
Match: D3Z4T3_MOUSE (Phosphoserine phosphatase n=4 Tax=Muroidea TaxID=337687 RepID=D3Z4T3_MOUSE) HSP 1 Score: 98.6 bits (244), Expect = 3.520e-25 Identity = 46/75 (61.33%), Postives = 58/75 (77.33%), Query Frame = 1
Query: 10 AVCFDVDSTVIAEEGIDTLADFCGASKGVADLTKRAMGGSMPFQDALKARLDLMVPSKRTVELCVEEHPPRLSPG 234
AVCFDVDSTVI EEGID LA FCG V+++T+RAMGG++PF+DAL RL L+ PS+ V+ + EHPP L+PG
Sbjct: 16 AVCFDVDSTVIREEGIDELAKFCGVEAAVSEMTRRAMGGALPFKDALTQRLALIQPSRDQVQRLLAEHPPHLTPG 90
BLAST of mRNA_H-elongata_contig109469.768.1 vs. uniprot
Match: A0A2J6M244_LACSA (Phosphoserine phosphatase n=2 Tax=Lactuca TaxID=4235 RepID=A0A2J6M244_LACSA) HSP 1 Score: 103 bits (257), Expect = 3.880e-25 Identity = 50/78 (64.10%), Postives = 61/78 (78.21%), Query Frame = 1
Query: 1 RVQAVCFDVDSTVIAEEGIDTLADFCGASKGVADLTKRAMGGSMPFQDALKARLDLMVPSKRTVELCVEEHPPRLSPG 234
+ +AVCFDVDSTV +EGID LA+FCGA K VA+ T RAMGGS+PF++AL ARL L PS TVE +E+ PP+LSPG
Sbjct: 81 KAEAVCFDVDSTVCMDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSTVEDFLEKRPPKLSPG 158 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109469.768.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig109469.768.1 >prot_H-elongata_contig109469.768.1 ID=prot_H-elongata_contig109469.768.1|Name=mRNA_H-elongata_contig109469.768.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=78bp RVQAVCFDVDSTVIAEEGIDTLADFCGASKGVADLTKRAMGGSMPFQDALback to top mRNA from alignment at H-elongata_contig109469:261..1341- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig109469.768.1 ID=mRNA_H-elongata_contig109469.768.1|Name=mRNA_H-elongata_contig109469.768.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1081bp|location=Sequence derived from alignment at H-elongata_contig109469:261..1341- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig109469:261..1341- >mRNA_H-elongata_contig109469.768.1 ID=mRNA_H-elongata_contig109469.768.1|Name=mRNA_H-elongata_contig109469.768.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=468bp|location=Sequence derived from alignment at H-elongata_contig109469:261..1341- (Himanthalia elongata Himel1 dioecious)back to top |