prot_H-elongata_contig109406.764.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig109406.764.1
Unique Nameprot_H-elongata_contig109406.764.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length115
Homology
BLAST of mRNA_H-elongata_contig109406.764.1 vs. uniprot
Match: A0A6H5L4D8_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4D8_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 2.170e-36
Identity = 66/106 (62.26%), Postives = 82/106 (77.36%), Query Frame = 0
Query:    8 AHIGILTVTVARAQHLRSVSTLSTQDPYVRAKLLVDGYHTAEGRTAVHNNGGRNPDWTGRGNVITFRLPPSVPFSRLAVVLEIHDENIVQ-DNMIGTCGQIPLERV 112
            A +G LTV VA AQ+L+SVST+STQDPYV+AKLLVDGY  +E ++  HNNGGRNP W GR N  TF +P +VP  +LAVVLEI+D N +  D MIGTCG+IPL+ +
Sbjct:  136 AQVGGLTVNVACAQNLKSVSTMSTQDPYVKAKLLVDGYQVSEVKSGTHNNGGRNPSWAGRNNFFTFYVPSNVPLRKLAVVLEIYDYNTMSADKMIGTCGKIPLQGI 241          
BLAST of mRNA_H-elongata_contig109406.764.1 vs. uniprot
Match: D7G451_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G451_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 8.880e-36
Identity = 65/106 (61.32%), Postives = 81/106 (76.42%), Query Frame = 0
Query:    8 AHIGILTVTVARAQHLRSVSTLSTQDPYVRAKLLVDGYHTAEGRTAVHNNGGRNPDWTGRGNVITFRLPPSVPFSRLAVVLEIHDENIVQ-DNMIGTCGQIPLERV 112
            A +G LTV VA AQ+L+SVST+STQDPYV+AKLLVDGY  +E ++  HNNGGRNP W  R N  TF +P +VP  +LAVVLEI+D N +  D MIGTCG+IPL+ +
Sbjct:  159 AQVGGLTVNVACAQNLKSVSTMSTQDPYVKAKLLVDGYQISEVKSGTHNNGGRNPSWARRNNFFTFYVPSNVPLRKLAVVLEIYDYNTMSADKMIGTCGKIPLQGI 264          
BLAST of mRNA_H-elongata_contig109406.764.1 vs. uniprot
Match: A0A6H5JZ55_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ55_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 2.760e-21
Identity = 47/104 (45.19%), Postives = 70/104 (67.31%), Query Frame = 0
Query:    8 AHIGILTVTVARAQHLRSVSTLSTQDPYVRAKLLVDGYHTAEGRTAVHNNGGRNPDWTGRG-NVITFRLPPSVPFSRLAVVLEIHDENIVQDNMIGTCGQIPLE 110
            A + ++TV V +AQ+L+ V  +  QDPYVRAKLL +G+   E R++ H +GGRNP W     +V TF +P +V    LAVVL++ ++N+V D++IGT G I L+
Sbjct:  183 APVNMVTVRVCQAQNLKKVQMIGKQDPYVRAKLLFNGHKIGECRSSTHTDGGRNPTWQNMAKSVFTFYVPATVTLDTLAVVLDVVNDNLVADSIIGTTGSIGLQ 286          
BLAST of mRNA_H-elongata_contig109406.764.1 vs. uniprot
Match: D8LMN7_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN7_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 3.030e-21
Identity = 47/104 (45.19%), Postives = 70/104 (67.31%), Query Frame = 0
Query:    8 AHIGILTVTVARAQHLRSVSTLSTQDPYVRAKLLVDGYHTAEGRTAVHNNGGRNPDWTGRG-NVITFRLPPSVPFSRLAVVLEIHDENIVQDNMIGTCGQIPLE 110
            A + ++TV V +AQ+L+ V  +  QDPYVRAKLL +G+   E R++ H +GGRNP W     +V TF +P +V    LAVVL++ ++N+V D++IGT G I L+
Sbjct:  165 APVNMVTVRVCQAQNLKKVQMIGKQDPYVRAKLLFNGHKIGECRSSTHTDGGRNPTWQNMARSVFTFYVPATVTLETLAVVLDVVNDNLVADSIIGTTGSIGLK 268          
BLAST of mRNA_H-elongata_contig109406.764.1 vs. uniprot
Match: A8JA57_CHLRE (Predicted protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8JA57_CHLRE)

HSP 1 Score: 50.4 bits (119), Expect = 5.680e-5
Identity = 36/96 (37.50%), Postives = 51/96 (53.12%), Query Frame = 0
Query:   11 GILTVTVARAQHLRSVSTLSTQDPYVRAKLLVDGYHTAEGRTAVHNNGGRNPDW--TGRGNVITFRLPPSVPFSRLAVVLEIHDENIVQDNMIGTC 104
            G+++VT+  A+ L+       QDPY   ++   G  T   RTAV  +GGRNP W  T R NVI              V +EI DE++ +D++IGTC
Sbjct:    6 GVMSVTLEFAKDLKDADWFGKQDPYCIIRI---GGQTFRTRTAV--DGGRNPVWNDTFRFNVINENN----------VEVEIKDEDVGKDDLIGTC 86          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109406.764.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L4D8_9PHAE2.170e-3662.26C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7G451_ECTSI8.880e-3661.32C2 domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5JZ55_9PHAE2.760e-2145.19C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LMN7_ECTSI3.030e-2145.19C2 domain-containing protein n=1 Tax=Ectocarpus si... [more]
A8JA57_CHLRE5.680e-537.50Predicted protein n=2 Tax=Chlamydomonas reinhardti... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainPFAMPF00168C2coord: 11..110
e-value: 4.7E-9
score: 36.5
IPR000008C2 domainPROSITEPS50004C2coord: 13..105
score: 11.64
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 2..114
e-value: 1.8E-12
score: 49.1
NoneNo IPR availablePANTHERPTHR47052:SF3coord: 7..114
NoneNo IPR availablePANTHERPTHR47052FAMILY NOT NAMEDcoord: 7..114
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 9..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig109406contigH-elongata_contig109406:440..1099 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig109406.764.1mRNA_H-elongata_contig109406.764.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig109406 440..1099 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig109406.764.1 ID=prot_H-elongata_contig109406.764.1|Name=mRNA_H-elongata_contig109406.764.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=115bp
MFGTFQQAHIGILTVTVARAQHLRSVSTLSTQDPYVRAKLLVDGYHTAEG
RTAVHNNGGRNPDWTGRGNVITFRLPPSVPFSRLAVVLEIHDENIVQDNM
IGTCGQIPLERVRS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR035892C2_domain_sf