mRNA_H-elongata_contig10930.757.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig10930.757.1 vs. uniprot
Match: A0A6H5KYG2_9PHAE (APC1_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYG2_9PHAE) HSP 1 Score: 1240 bits (3209), Expect = 0.000e+0 Identity = 869/1636 (53.12%), Postives = 980/1636 (59.90%), Query Frame = 1
Query: 49 IIQAQDLGSYPAPAPYFTVLSSVNGGHAWAGRSAGEGLA-PADPAAQEELFVNASGTSAVWRSLGGQVVHGSFRSVVLGPNAAVEGGLRGG-----GGCRGG-YGAIAQVVRCRFPARLDGWSSSLAGRKVVEEEWQRQRWIRRSRRGPWSVCLLRNPDLVTIHHPDGDSHDVTLPFEAQSILSLGEGLLVQRSSDGDSDADNGRFSLGAAGSGGGQGEEGIEEGSDSLLALPSLFSLQHPLDELRPVTLFPPSMGPDGNRETATXXXXXXXXXXXXXXQEEQP-------------RLFSDAAEQLVFARGGHDLGPGGDLDSSLVLTYHSERRRHSLWLVLPVLEPKLQPEPERGSMEGFGESL--PFNGFLVDGVSMLGQAGDESVSVMDSWRATTGMSSSTLGADVGSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRRDRRSLGGGGAGSSMGRGHPSTNGGAAR----------RASSGSNISWIGAGNTRNEALANALGLGQSGLGVSSNILSLSTAGGXXXXXXXXXDRIVGTDPFLSGVLGGKRLGGVSTMALGEKQTLEEKKDLEDDDIDEEESQPIRPRLGLSLLWTEAEDTPAAAQSAFCAA--ANGHDGA-----------------------------------------GGVRVAEAFTLPCQSAVGLCATFSGEGEGTSPGAAIAANILILAPGGDLILYRGEVPVVRVAVPTVIFSTISAPVCGGAKDG---HDQLACVSEAVGSCFTLTTRGGERRRFRLSLDPASPLVAACCSAWDSLLSASLSDSLRADIACVAQTLAGLGERKSGKSSAV-------------EDRDRRGGKGSTSDGGGIEWDLEWAALVAVLRRDEVRGRDESSASGSSGGNVESRSDGGGDDDCSRDRAWASLLSSPFHDRFSRDNAMLFCGFAHSFD--SMGPEPR------APPKQPLPRDAPPSLPLRTKRSAFLNEAGAVFDALHLTLENLKTSRLSLALVPRLASLLLSITRICGRRGADMRDFTDHYWRDAAGSGCGGG-GESGSMIARGS--------IATSALPVRPTRFLKVPCIRRWVHARVRTGKIS--MEVADLPLRDRRSEGEEEWESATKIARVTPRYGGEAGPFPVLPCRHRALQSTRRFCRFYTILCGGNDDLGSLSAGLSPGA--------------------------DWVGARLVAAMVEEGYGSSESLDGVPLGLSLPLLELLHAARGQAPSDWPAAAQELVGRQDLSALRRMLGESDVGGPSEEGDE----------DDSGGGLGREAGGYWSGGRISSSAFAGRDSAGGRVACRHAGGEGRMSH----ARGGIGGGXXXXXXXXXXXXXXXXXXXXEGVDLDGLAWVDELSSLRFGRDRRVREACRLLRGSRPVRFHVERSPESSDHDHQQRQQARLLQLALRTLAGPTGRGMFTLGTLAPLLAEPLPIPPLCLAGRIRKPADVVINLDLTAVAVPPDTTAWAEFHNGVAAGLRVQHDWGQTGRGGRSNYSAAGSGDGXXGSNATAGFETGGVSRTWITYNRPAGGVNNAHGGLLMALGLEGHLSSLAMTDVYEYLTLGQESTTVGVLLGMAAARRGSADMSTHKV 4506
++ AQDLG YP PAP VLSS +GGHA PADPAAQEELFV+AS TSAVWRSLGGQ+ H SFRSVVLGP AA+EGGLRGG GG G +G I QVVRCRFP L+GWSS G + + R+R +R RRGPWSVC+LR PDLVT+HHP GDSHDVTLP EA+ + SLGEGLLVQR + +G D ++PSLF+L HPLDELRPV L PP++ + E XXXXXXXXXXXXXX RL DA+E +VFARGG D G G D +SL+LTYH+ RRRHSLWL PV EP+ EPE S ESL G V G M+GQ+ V SW T G+SS T D SL RRDR S GG SMGRG S GG RASSGSN SWIGAGNTRNEALA+ALGLGQSGLGV+SNILSLS G +R G DPFL L S+MA +E +QPIRP LG+SL+W EAE +PA AQ FCA A+G A GV V EAFTLPC+SAVGLCAT GEGEGT PGAAI+A+IL+L G L LYRG PV RVA P V G DG + + +SEAVGSCFTLTTRGG+RRR RLSLDP+SPLV+AC AWDSLL A L+ SLRADIA A LA GER G+ + D +G K S ++ DL+WAALV+VLR + V G DES+ + SG + + GG DD W LL+SPFH+ FSR NAM+ GF H+ + ++ PR + ++ R L+T+RS FL EAGAVFDALHL LE+LKTSR + +LVPRLASLLLSI+R+CG G MRDF DHYWRDAAG CG G GE SMI R LP RPTRF KVPC R WVHAR+RTGK++ + AD PL +A PRY GE G FP LP LQ+TRRFCRFYTI+CGG+D G GA DWVGARLVAAMVEEGY +E L+ PLGL+LPLLE+LHAA QA +WPAAAQELVGRQDLSALRRMLG S V G S GD G G E GYW+GGRIS S RD G G GR + G XXXXXXXXXXXXX + DLDGLAWVDELSSLRFGRDRRVREACRLLRGSRPVRFHV+RSPESSDHDHQQRQQARLLQLA+RTLAGP GRGM TLGTLAPLLAEPLPIPPLCLAGRIRKPADVV+NLDL A AVPPDTTAWAEFHNGVAAGLR+QH+WG RS +G XX A++GFE G VSRTWITYNRPAGG NNAHGGLLMALGL+GHLSSLAMTDV+EYLTLGQESTTVGVLLGMAAARRGSAD+STHK+
Sbjct: 14 VVHAQDLGPYPLPAPSCMVLSSTDGGHAXXXXXXXXXXXXPADPAAQEELFVDASSTSAVWRSLGGQIAHTSFRSVVLGPTAALEGGLRGGACGGIGGAGAGVHGTITQVVRCRFPTLLEGWSSIRQGGQGAVQVDGRRRQRQRRRRGPWSVCILRQPDLVTVHHPRGDSHDVTLPCEARLLQSLGEGLLVQRYAGXXXXXXXXXXXXXXXXX---XXXXXXXDGLDPSFSVPSLFTLLHPLDELRPVALLPPAVSARRSNEFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLVCDASEHVVFARGGGDGGTGRD--TSLLLTYHTGRRRHSLWLATPVPEPEKGSEPEEES-----ESLLATAGGISVSGSMMVGQSPGGGVR---SWATTPGLSS-TRAVDTSSLSSTLLGVSALKSPSSSAGVTMMDAVLDAGNP-RRDRLSAGG-----SMGRGRLS--GGXXXXXXXXXXXXXRASSGSNASWIGAGNTRNEALASALGLGQSGLGVASNILSLSAPAGHH-------ERAGGADPFL--------LNASSSMAXXXXXXXXXXXXXXXXXXXKEGAQPIRPHLGISLVWREAEGSPAPAQHVFCAEGEASGESAATGSASPSSSGSFLLCFVERQAARLRALSVSXXXXXXXXXXXXGVEVREAFTLPCRSAVGLCATGGGEGEGT-PGAAISADILVLGLDGSLTLYRGGRPVTRVARPAV----------AGLSDGASSNGEPESISEAVGSCFTLTTRGGQRRRLRLSLDPSSPLVSACLGAWDSLLGAPLAASLRADIASAAHCLAEQGERPRGEGAGTGWGSSDXXXXXXXXXXDEKGHKDS------VDGDLDWAALVSVLR-ELVSGTDESAHTSLSGQSADLADRGGDGDD------WECLLASPFHEEFSRANAMMLSGFHHATELTTVNGRPRGDSLAFSSAQRQQQRHV-----LQTQRSDFLLEAGAVFDALHLVLEDLKTSRFTTSLVPRLASLLLSISRMCGDGGTGMRDFADHYWRDAAG--CGHGVGERTSMIDRSDGGAAHRKETGAGGLPNRPTRFDKVPCFRSWVHARIRTGKVANGADPADGPL---------------PVA-GGPRYSGEGGQFPTLPKDSGVLQATRRFCRFYTIICGGSDGGARAGVGKQQGAGRGTAAPAGAGGETGASFPGPGFRESDWVGARLVAAMVEEGY-RAEDLERAPLGLTLPLLEVLHAASSQALVEWPAAAQELVGRQDLSALRRMLG-SFVDGGSGSGDSVCEXXXXXXXXXXXXGFG-ETEGYWTGGRISGSGAGARDGTGR--------GAGRXXXXXXLGQAGXXXXXXXXXXXXXXXXXSPLGAGGDATDLDGLAWVDELSSLRFGRDRRVREACRLLRGSRPVRFHVDRSPESSDHDHQQRQQARLLQLAMRTLAGPLGRGMLTLGTLAPLLAEPLPIPPLCLAGRIRKPADVVVNLDLAAAAVPPDTTAWAEFHNGVAAGLRLQHEWGSNRA--RSGKDGSGXXXXXXXVAASSGFEEGVVSRTWITYNRPAGGANNAHGGLLMALGLQGHLSSLAMTDVFEYLTLGQESTTVGVLLGMAAARRGSADLSTHKM 1552
BLAST of mRNA_H-elongata_contig10930.757.1 vs. uniprot
Match: A0A4D9CS56_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CS56_9STRA) HSP 1 Score: 227 bits (579), Expect = 1.540e-56 Identity = 130/248 (52.42%), Postives = 160/248 (64.52%), Query Frame = 1
Query: 3763 VDLDGLAWVDELSSLRFGRDRRVREACRLLRGSRPVRFHVERSPESSDHDHQQRQQARLLQLALRTLAGPTGRGMFTLGTLAPLLAEPLPIPPLCLAGRIRKPADVVINLDLTAVAVPPDTTAWAEFHNGVAAGLRVQHDWGQTGRGGRSNYSAAGSGDGXXGSNATAGFETGGVSRTWITYNRPAGGVNNAHGGLLMALGLEGHLSSLAMTDVYEYLTLGQESTTVGVLLGMAAARRGSADMSTHKV 4506
D +GL V+E + LRFGRD RVRE CRLL SRP+ V+R E SDHD+ QRQQARLL L R+L+ P RGM TL + PLLAEPLP+P LCLA + P+ ++LD +A PD T W EFHNGVAAGLR+ WG+ G GVSRTWI YNRP ++AHGG L+ALGL+GHLSSLA+TD+Y+YLT G + TTVGV LGMAA++RG+AD + K+
Sbjct: 998 ADREGLRLVEEGARLRFGRDHRVREVCRLLCSSRPIYLKVDRPAELSDHDYAQRQQARLLLLCRRSLSTPIARGMLTLASFHPLLAEPLPLPRLCLAATLP-PSLATLHLDTSAYT--PDLTLWPEFHNGVAAGLRLAPAWGREGX--------------------XXXXXXXGVSRTWIIYNRPRT-PSHAHGGFLLALGLQGHLSSLAVTDLYDYLTQGHDPTTVGVFLGMAASKRGTADATVSKM 1221
BLAST of mRNA_H-elongata_contig10930.757.1 vs. uniprot
Match: A0A7S2LS68_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LS68_9STRA) HSP 1 Score: 219 bits (557), Expect = 8.850e-54 Identity = 161/467 (34.48%), Postives = 228/467 (48.82%), Query Frame = 1
Query: 3169 PCR-HRALQSTRRFCRFYTILCGGNDDLGSLSAGLSPGADWVGARLVAAMVEEGYGSSESLDGVPLGLSLPLLELLHAARGQAPSDWPAAAQELVGRQDLSALRRMLGESDVGGPSEEGDEDDSGGGLGREAGGYWSGGRISSSAFAGRDSAGGRVACRHAGGEGRMSHARGGIGGGXXXXXXXXXXXXXXXXXXXXEGVDLDGLAWVDELSSLRFGRDRRVREACRLLRGSRPVRFHVERSPESSDHDHQQRQQARLLQLALRTLAGPTGRGMFTLGTLAPLLAEPLPIPPLCLAGRIRKPADVVINLDLTAVAVPPDTTAWAEFHNGVAAGLR--VQHDWGQTGRGGRSNYSAAGSGDGXXGSNATAGFETGGVSRTWITYNRPA------------------GGVNNAHGGLLMALGLEGHLSSLAMTDVYEYLTLGQESTTVGVLLGMAAARRGSADMSTHKV 4506
PC ++A +++R+ C F TIL +D+ + +S V V AM E+G+ S LD P+G+SLP+ E L++ R P +WP A L+GR+DL L ++ L R +SS R C + + + R G D DGL ++ +S+ F D RVR+A ++R S+PV V+R PE SDH++++ +QA LL L R+LA GRGM T+GTL LAE LPIP +CLAGR+ P + ++ LD T+ P + T W EFHNGVA+GLR V++D Q E+ ++RTWI YN+P+ G +AHGG LMALGL GHLS LA+TD+++YLT G +T VGVLLGMAA +R + D +T K+
Sbjct: 372 PCGVNKAFRTSRQLCLFLTILFDSKNDVICGGSNISRREFDV----VLAMEEQGFSSPADLDDFPIGVSLPIREALYSCRSAPPENWPPRAYSLIGREDLRHSHGPLSQA-----------------L-----------RPASSPLT-------RYRCSN------LDNMRKG-------NELEKNERSKSREATLDGNKDCDGLTLLESFASMLFPHDTRVRDASLMVRSSKPVFLRVDRPPEVSDHEYEKLKQANLLLLCNRSLALSVGRGMMTVGTLHSSLAERLPIPEICLAGRVP-PTNTIVALDTTSA--PAEMTIWPEFHNGVASGLRIGVENDESQ---------------------------ESAQITRTWILYNKPSASNSQSAPQNRSTQKNKSGNTQHAHGGFLMALGLRGHLSKLAITDIFDYLTTGSVTTIVGVLLGMAANKRSTCDPATSKM 756
BLAST of mRNA_H-elongata_contig10930.757.1 vs. uniprot
Match: A0A835ZGE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGE2_9STRA) HSP 1 Score: 215 bits (548), Expect = 1.590e-52 Identity = 279/960 (29.06%), Postives = 367/960 (38.23%), Query Frame = 1
Query: 1942 NILILAPGGDLILYRGEVPVVRVAVPT-------VIFSTISAPVCGGAKDGHDQLACVSEAVGSCFTLTTRGGERRRFRLSLDPASPLVAACCSAWDS---LLSASLSDSLRADIACVAQTLAGLGERKSGKSSAVEDRDRRGGKGSTSDGGGIEWDLEWAALVAVLRR--DEVRGRDE--SSASGSSGGNVESRSDGGGDDDCSRDR---AWASLLSSPFHDRFSRDNAMLF-CGFAHSFDSMGPE-PRAPPKQPLPRDAPPSLP-LRTKRSAFLNEAGAVFDALHLTLENLKTSRLSLALVPRLASLLLSITRICGRRGADMRDFTD-----HYWRDAAGSGCGGGGESGSMIARGSIATSALPVRPTRFLKVPCIRRWVHARVRTGKISMEVADLPLRDRRSEGEEEWESATKIARVTPRYGGEAGPFPVLPCRHRALQSTRRFCRFYTILCGGNDDLGSLSAGLSPGADWVGARLVAAMVEEGYGSSESLDGVPLGLSLPLLELLHAARGQAPSDWPAAAQELVGRQDLSALRRMLGESDVGGPSEEGDEDDSGGGLGREAGGYWSGGRISSSAFAGRDSAGGRVACRHAGGEGRMSHARGGIGGGXXXXXXXXXXXXXXXXXXXXEGVDLDGLAWVDELSSLRFGRDRR----------------------------------------------------------------------VREACRLLRGSRPVRFHVERSPESSDHDHQQRQQARLLQLALRTLAGPTGRGMFTLGTLAPLLAE---PLPIPPLCLAGRIRKPADVVINLDLTAVAVPPDTTAWAEFHNGVAAGLRVQHDWGQTGRGGRSNYSAAGSGDGXXGSNATAGFETGGVSRTWITYNRPAGGVNNAHGGLLMALGLEGHLSSLAMTDVYEYL---TLGQES--TTVGVLLGMAAARRGSADMSTHKVKR 4512
+L+L+ G+L LY G+ V V +P HD + + + VG+ FT G R R L L P SP+ AA + D+ L + +++ +LR D A LA +A D G G D+EW AL +V+R+ G +E +S+ + V S G AW +L +SPF + NA L C S+GP P A LPR +PP LP L T+ +A A A ALH+ E++ S L+ A PR+A+L+ + R AD + Y R C GG + S+ G A P P+ + R+V +EW V G+AG P R RR CR Y L G GS GA +V MVEEG+G E LD VP+ L+ PLLE L A + P WP AA L+ RQD++A+ + + R +A A H GE GG D DGLA V+ S LRF D R VRE CR LR +R +ER+PE +DHDH RQQARLLQL R LA RGM +LG + P L + PLPIPPL LAGR+ P+ V INLD TA+ V + TAW EFHNGVAAGLR+ A AG ++R W+ YNR + A GLL+ALGL+GHL +L D+ YL T G + TT+G LLG+AA RRG+ H+ R
Sbjct: 561 EMLLLSTSGELSLYCGQHRVCAVRLPASCXXXXXXXXXXXXXXXXXXXXXXHDPVVALEDPVGATFTAVAASGRRWRCALRLCPDSPVAAAALRSLDAVPALNATAVAAALRIDTVRCAAALA----------AAAADERCDSGSG----------DVEWRALCSVVRQLLSGCGGANEPVTSSQAPAPHAVPPFSSSGXXXXXXXXXXXSAWEALGASPFAAHHALGNADLDRCLSDLGGGSIGPSVPSA-----LPRLSPPQLPSLATEAAALRGCALAAAQALHMAHEDMLASALTEARAPRVAALVADLARFVLSADADPQCVACARALLRYHR------CLGGSAAPSLPRSGPQAAPPPPEVPSLY---DTAIRYVSG--------------------GAAPQEWGWP-----VLSGSSGDAGSGAAAPLL-RGNGPARRLCRLYAALAGTASGSGSXXXXXXXXGR-CGA-MVLKMVEEGFGCEE-LDQVPVALAAPLLEALQACCQRPPLGWPRAAYALLSRQDVAAMTALREQQ--------------------------------------RSTA---AAALHDKGE-----------GGAPPPAPVSQASVVGDGGGLFADKDGDGLAQVEAASVLRFPEDHRALLAPRRTYLSAAAAARLRVHCCCAVLSNRCRGRAYTSALLLHTFPNIAAASGGRAAPHAXXXXXXXXXXVREVCRALRCTRRQPLRLERAPEVTDHDHLARQQARLLQLCERMLAAAPARGMLSLGGVLPSLLQDPLPLPIPPLSLAGRVL-PSGVTINLDTTALDVSAEWTAWPEFHNGVAAGLRL----------------------------AAAGGGVPAMTRAWVLYNRAGAVPSKAQDGLLLALGLQGHLKALTGHDITRYLEQRTDGSQGPFTTIGCLLGLAADRRGTGSRLIHRALR 1376
BLAST of mRNA_H-elongata_contig10930.757.1 vs. uniprot
Match: A0A7S4MEE8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MEE8_9STRA) HSP 1 Score: 212 bits (540), Expect = 1.070e-51 Identity = 224/686 (32.65%), Postives = 294/686 (42.86%), Query Frame = 1
Query: 2710 NEAGAVFDALHLTLENLKTSRLSLAL--VPRLASLLLSITRICGRRGAD-------------MRDFTDHYWRDAAGS----GCGGGGESGSMIARGSIATSALPVRPT--RFLKVPCIRRWVHARVRTGKISMEVADLPLRDRRSEGEEEWESATKIARVTPRYGGEA----GPFPVLPCRHR---ALQSTRRFCRFYTIL-------CGGN---------DDLGSLSAGLSPGADW------VGARLVAAMVEEGYGS-SESLDGVPLGLSLPLLELLHAARGQAPSD-------WPAAAQELVGRQDLSALRRMLGESDVGGPSEEGDEDDSGGGLGREAGGYWSGGRISSSAFAGRDSAGGRVACRHAGGEGRMSHARGGIGGGXXXXXXXXXXXXXXXXXXXXEGVDLDGLAWVDELSSLRFGRDRRVREACRLLRGSRPVRFHVERSPESSDHDHQQRQQARLLQLALRTLAGPTGRGMFTLGTLAP----LLAEPLPIPPLCLAGRIRKPADVVINLDLTAVAVPPDTTAWAEFHNGVAAGLRVQHDWGQTGRGGRSNYSAAGSGDGXXGSNATAGFETGGVSRTWITYNRPA-------------------GGV------NNAHGGLLMALGLEGHLSSLAMTDVYEYLTLGQESTTVGVLLGMAAARRGSADMSTHKV 4506
N A A+FD+LHL E+ K SR + + L +LL+ R+C + G M DF DHY RD + C +GS + ++A +A VR + F PC W+ + S +E EEE GGE+ G F R+ TR RF++IL GG+ +D + + A W LV AM++EG S LD P ++LPL+E LH R P D WP +A L+ R D+ RR SD S EG SA A G SH G + D DGL ++ LSS+ F D RVREA RLLR SRP+ V R+PE SDHD+++ +Q RLL L R LA P GRGM T+GTL P AEPLP+P LCL GR+ P + + LD++ P D + W EFHNGVAAGLR+ +GDG + G ++RTWI YN+PA G V N+AHGG LMALGL GHL++L+M D+Y+YLT G +TTVG+LLGMAA +RG+ D S K+
Sbjct: 276 NVAQAIFDSLHLLYEDSKLSRNTRGTTWIRPLGALLV---RLCTKVGIANSLSSSGVGGVFVMGDFIDHYHRDLGHAYLQDHCPLEDANGSERSSIAMAAAAESVRSSISTFTAPPCFFSWMDGLMNGYYYSG-----------AEDEEE--------------GGESFIDKGQFYARMARNELNGVCSLTRVVHRFFSILFDDEERAAGGSVHGHTGSSREDEMEIDTPMDEEA-WKESDCATDRNLVLAMIDEGLCQPSVLLDEFPTAVALPLMEALHRCRSDPPLDPLPDGVKWPNSAYSLINRSDIVETRRKK-VSDRDPVSSEG-----------------------VSAIA----------------SGHRSHPHG------------------------RDDPDRDGLVPLEHLSSMLFPEDDRVREAVRLLRSSRPIFLRVPRAPEVSDHDYERLKQERLLLLCRRVLAFPLGRGMSTIGTLPPETVTRAAEPLPMPDLCLQGRVP-PTNATLALDVSGC--PVDMSLWPEFHNGVAAGLRLPL-----------------AGDGLK-NKKNDGLRQ--ITRTWIVYNKPASASVSASSQNRQGGNNAGDGAVDGNDRPNHAHGGFLMALGLRGHLAALSMPDIYDYLTQGAVTTTVGILLGMAANKRGTCDPSVSKM 845
BLAST of mRNA_H-elongata_contig10930.757.1 vs. uniprot
Match: A0A7S2UAK4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAK4_9STRA) HSP 1 Score: 211 bits (536), Expect = 3.350e-51 Identity = 153/427 (35.83%), Postives = 212/427 (49.65%), Query Frame = 1
Query: 3298 RLVAAMVEEGYGSSESL-DGVPLGLSLPLLELLHAARGQAPS-----DWPAAAQELVGRQDLSALRRMLGESDVGGPSEEGDEDDSGGGLGREAGGYWSGGRISSSAFAGRDSAGGRVACRHAGGEGRMSHARGGIGGGXXXXXXXXXXXXXXXXXXXXEGVDLDGLAWVDELSSLRFGRDRRVREACRLLRGSRPVRFHVERSPESSDHDHQQRQQARLLQLALRTLAGPTGRGMFTLGTLAPLLAEPLPIPPLCLAGRIRKPADVVINLDLTAVAVPPDTTAWAEFHNGVAAGLRVQHDWGQTGRGGRSNYSAAGSGDGXXGSNATAGFETGGVSRTWITYNRPAGGV------------------NNAHGGLLMALGLEGHLSSLAMTDVYEYLTLGQESTTVGVLLGMAAARRGSADMSTHKV 4506
RLV M+ EG L D +P G+++PL+E+L+ R P+ +W AA L+GR DL+ + ++ + D+ S + + +++ + +G + G A VD DG+ ++ SS+ F D R+REA RLLR SRP V R+ E +DHD+++ +Q +LL L R LA P GRGM TLG L P+ AEP+P+P +CLAGR+ P + + LD++ A D T W EFHNGVAAGLR+ AG GD +G G ++RTWI YNRPA N +HGG L+ALGL GHLSSLAMTD+YEYLT G +TTVG+LLG AAA+RG+ D + K+
Sbjct: 823 RLVITMINEGIDDPAILVDELPAGVAIPLMEVLNRCRSDPPTTSSSTNWTPAAYSLIGRPDLAEMEKIGRDHDIDEQSSSNNHN-----------------KLTHKSISGNEPVGTSAA--------------------------------------EILDVDKDGVVPLEHTSSMLFPDDNRIREAGRLLRSSRPSYLRVFRAVEVTDHDYERLKQEKLLLLCRRVLALPLGRGMLTLGNLQPVPAEPMPMPDICLAGRVI-PTNGKLALDVSNCA--SDMTMWPEFHNGVAAGLRLP---------------LAGRGD-------ASGL--GQITRTWIVYNRPAPVTPPXXXXXXXXXXXXAPVQNQSHGGFLLALGLRGHLSSLAMTDIYEYLTKGSVTTTVGILLGTAAAKRGTCDPAVSKM 1167
BLAST of mRNA_H-elongata_contig10930.757.1 vs. uniprot
Match: A0A7S1BAS0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BAS0_9STRA) HSP 1 Score: 209 bits (532), Expect = 1.200e-50 Identity = 126/278 (45.32%), Postives = 158/278 (56.83%), Query Frame = 1
Query: 3766 DLDGLAWVDELSSLRFGRDRRVREACRLLRGSRPVRFHVERSPESSDHDHQQRQQARLLQLALRTLAGPTGRGMFTLGTLAPLLAEPLPIPPLCLAGRIRKPADVVINLDLTAVAVPPDTTAWAEFHNGVAAGLRVQHDWGQTGRGGRSNYSAAGSGDGXXGSNATAGFETGGVSRTWITYNRP-------------------------------AGGVNNAHGGLLMALGLEGHLSSLAMTDVYEYLTLGQESTTVGVLLGMAAARRGSADMSTHKV 4506
D GL V+ SS+ FG DRRV E CRLLR S PV V+R+PE SDH+H++R+Q++LL L R +A P GRGM TLGTL PLL+EPLPIP + L+GR+ P +VV+ LD T + D W FHNGVAAGLR+ T + RTWI YNRP + N+AHGG+LMALGL+GHLSSLAMTD+YEYLT ++TTVGVL+GMAA++RG+ D S K+
Sbjct: 1059 DPSGLLHVENFSSMLFGHDRRVHEVCRLLRSSTPVYLKVDRAPEVSDHEHERRKQSKLLLLCGRNMALPLGRGMLTLGTLRPLLSEPLPIPDVSLSGRVP-PTNVVVKLDTTNCST--DMMVWPHFHNGVAAGLRLA--------------------------------ATKKIPRTWIIYNRPDPQNSNSNTXXXXXXXXXXXXXXXXXXXXXSSSPPNHAHGGMLMALGLQGHLSSLAMTDIYEYLTQNIDTTTVGVLIGMAASKRGTCDPSISKM 1301
BLAST of mRNA_H-elongata_contig10930.757.1 vs. uniprot
Match: A0A199VY02_ANACO (Anaphase-promoting complex subunit 1 n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A199VY02_ANACO) HSP 1 Score: 202 bits (515), Expect = 1.120e-48 Identity = 206/674 (30.56%), Postives = 284/674 (42.14%), Query Frame = 1
Query: 2524 AWASLLSSPFHDRFSRDNAMLFCGFAHSFDSMGPEPRAPPKQPLPRDAPPSLPLRTKRSAFLNEAGAVFDALHLTLENLKTSRLSLALVPRLASLLLSITRICGRRGADMRDFTDHYWRDAAGSGCGGGGESGSMIARGSIATSALPVRPTRFLKVPCIRRWVHARVRTGKISMEVADLPLRDRRSEGEEEWESATKIARVTPRYGGEAGPFPVLPCRHRAL--QSTRRFCRFYTILCGGNDDLGSLSAGL-----SPGADWVGARLVAAMVEEGYGSSESLDGVPLGLSLPLLELLHAARGQAPSDWPAAAQELVGRQDLSA--LRRMLGESDVGGPSEEGDEDDSGGGLGREAGGYWSGGRISSSAFAGRDSAGGRVACRHAGGEGRMSHARGGIGGGXXXXXXXXXXXXXXXXXXXXEGVDLDGLAWVDELSS-LRFGRDRRVREACRLLRGSRPVRFHVERSPESSDHDHQQRQQARLLQLALRTLAGPTGRGMFTLGTLAPLLAEPLPIPPLCLAGRIRKPADVVINLDLTAVAVPPDTTAWAEFHNGVAAGLRVQHDWGQTGRGGRSNYSAAGSGDGXXGSNATAGFETGGVSRTWITYNRPAGGVNNAHGGLLMALGLEGHLSSLAMTDVYEYLTLGQESTTVGVLLGMAAARRGSADMSTHKVKRL 4515
AW L+SS FH ++ + ++ H DS+G E A Q P + + FL E DALH ENLK + L + RLASLL +I G + + D+Y RD ++ S +++ P P PC+ RW+ + + G + D+P P++ CR ++L R+ FY++L G LS G+ + V V AMV E +G + LD +P+G+SLPL L R P+DWPA+A LVGR+DL+ L + + DV S ++ + M H + V+ DG + S+ LR+GRD R E RLL +RPV H+ +P +SD D QQ Q L LA RT A P GRG FTLGT LL E L +P L LAGR+ + +NLD ++ + +W EFHNGVAAGLR+ A F+ G +SRTWI YN+P N H GLL+ALGL GHL L +TDVY YL+ + TTVGVLLGMAA+ RG+ + K+ L
Sbjct: 533 AWDFLISSKFHCQYLKQSSASCISVVHVPDSVGSEYTAAYIQDEPSQE------VSFYARFLRET---LDALHALYENLKLNILRNQDIGRLASLLCNIAASLGEKS-----YVDYYCRDFP----------SILVEVHSFPSASAPQTP------PCLFRWLESCLLCGCDMANLNDIP--------------------------------PLI-CRDKSLVVSLARKIVSFYSLLLGAERRGRKLSTGVYCEVANGSVRTVEELTVLAMVGERFGR-QYLDLLPVGVSLPLRHALDKCRESPPTDWPASAYVLVGREDLAMAKLGSLKSQDDVNLTS---------------------------------------ISVPY------MLHLQPVTSPSSVSDITRSDSLNPEDSDSLYRSVE-DGTEHIFNSSTQLRYGRDLRFNEVRRLLCSARPVAIHMSVNPSASDQDLQQHQ---LWNLAQRTTALPLGRGAFTLGTTYTLLTEALVVPKLVLAGRLPAQQNATVNLDPNIRSIS-ELRSWPEFHNGVAAGLRL------------------------------APFQ-GKMSRTWIQYNKPEE-PNCTHAGLLLALGLHGHLRVLTITDVYRYLSQEHDFTTVGVLLGMAASHRGTMHPAISKMLHL 1060
BLAST of mRNA_H-elongata_contig10930.757.1 vs. uniprot
Match: A0A2K1JVD8_PHYPA (APC1_C domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JVD8_PHYPA) HSP 1 Score: 198 bits (504), Expect = 2.340e-47 Identity = 172/448 (38.39%), Postives = 213/448 (47.54%), Query Frame = 1
Query: 3196 TRRFCRFYTILCGGNDDLGSLSAG----LSPGADWVGA-RLVAAMVEEGYGSSESLDGVPLGLSLPLLELLHAARGQAPSDWPAAAQELVGRQDLSA--LRRMLGESDVGGPSEEGDEDDSGGGLGREAGGYWSGGRISSSAFAGRDSAGGRVACRHAGGEGRMSHARGGIGGGXXXXXXXXXXXXXXXXXXXXEGVD---LDGLAWVDELSS-LRFGRDRRVREACRLLRGSRPVRFHVERSPESSDHDHQQRQQARLLQLALRTLAGPTGRGMFTLGTLAPLLAEPLPIPPLCLAGRIRKPADVVINLDLTAVAVPPDTTAWAEFHNGVAAGLRVQHDWGQTGRGGRSNYSAAGSGDGXXGSNATAGFETGGVSRTWITYNRPAGGVNNAHGGLLMALGLEGHLSSLAMTDVYEYLTLGQESTTVGVLLGMAAARRGSADMSTHKV 4506
+RR FY +L GG G L +G +S G G R V AMV EG+G E LD +P G+SLPL L R P +WPA A L+GR+DL++ + R L E D+SG + Y S +A + SH R GVD +DG+ + S+ LRFGRD R+ E RLL S+PV P+ SD D QQA+L QLA RT A P GRG FTLGT + +L E LPIP L LAGR+ D +NLD + D T+W +FHNGVAAGLR+ GQT +SRTWI YN+P N +H GLLMALGL HL LA TDVY YL+ E+TTVGVLLGM+AA RG+ D K+
Sbjct: 741 SRRVIGFYDLLTGGEVVNGRLPSGVQLSISSGIATTGEQRTVLAMVAEGFGLPE-LDRLPPGVSLPLRHALDRCREAPPGNWPAQAYVLIGREDLASTHVARPLKHMTSHKIGENLKMDESG--TVTKQPDYLS------------------MAAPY------TSHLRP-----ISSLPGFSDPNDTADANGTTAGVDPQLVDGMEHMATTSAPLRFGRDLRLNEVRRLLGSSKPVAVRTNNVPDVSDPDIVALQQAQLWQLAQRTTALPFGRGAFTLGTSSAMLTEALPIPKLILAGRLPSQNDATVNLDANTANLA-DVTSWPDFHNGVAAGLRLAP--GQTK-----------------------------ISRTWIVYNKPDE-PNFSHAGLLMALGLLKHLGVLAATDVYRYLSQEHEATTVGVLLGMSAAHRGTMDPGISKM 1123
BLAST of mRNA_H-elongata_contig10930.757.1 vs. uniprot
Match: A0A1E7FL18_9STRA (APC1_C domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FL18_9STRA) HSP 1 Score: 195 bits (496), Expect = 4.040e-47 Identity = 152/431 (35.27%), Postives = 207/431 (48.03%), Query Frame = 1
Query: 3298 RLVAAMVEEGYGSSESL-DGVPLGLSLPLLELLHAARGQAPSDWP---AAAQELVGRQDL----SALRRMLGESDVGGPSEEGDEDDSGGGLGREAGGYWSGGRISSSAFAGRDSAGGRVACRHAGGEGRMSHARGGIGGGXXXXXXXXXXXXXXXXXXXXEGVDLDGLAWVDELSSLRFGRDRRVREACRLLRGSRPVRFHVERSPESSDHDHQQRQQARLLQLALRTLAGPTGRGMFTLGTLAPLLAEPLPIPPLCLAGRIRKPADVVINLDLTAVAVPPDTTAWAEFHNGVAAGLRV--QHDWGQTGRGGRSNYSAAGSGDGXXGSNATAGFETGGVSRTWITYNRPAG------------------GVNNAHGGLLMALGLEGHLSSLAMTDVYEYLTLGQESTTVGVLLGMAAARRGSADMSTHKV 4506
+V ++EEG + E+L D +P+G+SLPLLELLH R + + AA L+GR DL S +++ L S PS S H+ E H DG+ ++ SS+ F D R+RE RLLR S+ + V R+ E SDHD+++++Q +LL L+ R LA P GRGMFT+G L P+ AEPLP+P +CL+GRI P + + LD++ P D W EFHNGVAAGLR+ Q D G + S ++RTWI YNRP+ G+N+AHGGLLMALG+ GHL++L MTD+++YLT G +TTVG LLGMAA RGS D+S K+
Sbjct: 7 EVVKLLIEEGLSNPEALRDELPVGISLPLLELLHRCRTEGMGENKNVNAAVWSLIGRDDLYKNMSGMKQGLPLSPA--PSTPSSSPPS----------------------------------SHSVDESGDRHK--------------------------------DGITDLESTSSMLFPDDNRIREVGRLLRSSKSIYLRVPRAIEVSDHDYERQKQEKLLLLSRRVLALPVGRGMFTIGNLKPVPAEPLPLPDICLSGRIP-PTNSNMALDVSEC--PVDMNVWPEFHNGVAAGLRLPLQLD-------GEESISK--------------------ITRTWIVYNRPSNNSQVDSQNNANASDNNSQGLNHAHGGLLMALGMRGHLAALEMTDIFDYLTHGSVTTTVGCLLGMAANMRGSCDISVSKM 339 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10930.757.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10930.757.1 >prot_H-elongata_contig10930.757.1 ID=prot_H-elongata_contig10930.757.1|Name=mRNA_H-elongata_contig10930.757.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1506bp MQEEEDGSTAALQYPSIIQAQDLGSYPAPAPYFTVLSSVNGGHAWAGRSAback to top mRNA from alignment at H-elongata_contig10930:761..7706- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10930.757.1 ID=mRNA_H-elongata_contig10930.757.1|Name=mRNA_H-elongata_contig10930.757.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6946bp|location=Sequence derived from alignment at H-elongata_contig10930:761..7706- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10930:761..7706- >mRNA_H-elongata_contig10930.757.1 ID=mRNA_H-elongata_contig10930.757.1|Name=mRNA_H-elongata_contig10930.757.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=9036bp|location=Sequence derived from alignment at H-elongata_contig10930:761..7706- (Himanthalia elongata Himel1 dioecious)back to top |