mRNA_H-elongata_contig109292.753.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig109292.753.1
Unique NamemRNA_H-elongata_contig109292.753.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig109292.753.1 vs. uniprot
Match: A0A6H5JIP0_9PHAE (Pyr_redox_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIP0_9PHAE)

HSP 1 Score: 348 bits (893), Expect = 3.150e-117
Identity = 172/245 (70.20%), Postives = 201/245 (82.04%), Query Frame = 1
Query:    1 AKLGQRVACLDFVKPSPMGTKWGLGGTCVNVGCIPKKLMHQASLIAGHVKDAKVYGWISEHKNSPTHKGCDISG-----------HDWQSMVRAIQHYIKGLNFKYRSDLRSKGVEYLNALGRLKDVNTVVATIRGGQERVLKCGKIVVAVGGRPKPLICEGGDLAVTSDDLFSLQTHPGKTLVVGASYVALECAAGFLTGLGVDTTVMVRSVLLRRFDQDIAERIGRFMHAEGTRFIRPAVPRR 702
            A+LG++VACLDFVKPS MG+KWGLGGTCVNVGCIPKKLMHQA+L+AGH  DA  +GW +  +     +  +  G           HDW+ MV+ +Q+YIKGLNFKYR+DLRSKGVEY+NALGRL+DV+TVVAT +  +ERVL CG +VVAVGGRP  L CEGG+LA+TSDD+FSL+T PGKTLVVGASYVALECA GFLTGLGVDTTVMVRS+LLR FDQ IAERIG FM AEGTRF+RPAVP+R
Sbjct:   30 ARLGKKVACLDFVKPSVMGSKWGLGGTCVNVGCIPKKLMHQAALLAGHASDAPFFGWPAGPEGEDGSRSEEDGGVAGGEGKRSVTHDWEVMVQGVQNYIKGLNFKYRTDLRSKGVEYINALGRLQDVHTVVATDKNNKERVLSCGSVVVAVGGRPNQLPCEGGELAMTSDDIFSLRTPPGKTLVVGASYVALECA-GFLTGLGVDTTVMVRSILLRGFDQGIAERIGSFMEAEGTRFLRPAVPQR 273          
BLAST of mRNA_H-elongata_contig109292.753.1 vs. uniprot
Match: D8LJA3_ECTSI (Thioredoxin reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJA3_ECTSI)

HSP 1 Score: 347 bits (889), Expect = 9.180e-112
Identity = 172/245 (70.20%), Postives = 203/245 (82.86%), Query Frame = 1
Query:    1 AKLGQRVACLDFVKPSPMGTKWGLGGTCVNVGCIPKKLMHQASLIAGHVKDAKVYGWISEHKN---SPTHKGCDISG--------HDWQSMVRAIQHYIKGLNFKYRSDLRSKGVEYLNALGRLKDVNTVVATIRGGQERVLKCGKIVVAVGGRPKPLICEGGDLAVTSDDLFSLQTHPGKTLVVGASYVALECAAGFLTGLGVDTTVMVRSVLLRRFDQDIAERIGRFMHAEGTRFIRPAVPRR 702
            A+LG++VACLDFVKPS MG+KWGLGGTCVNVGCIPKKLMHQA+L+AGH KDA  +GW +  +    S   +   ++G        HDW+ MV+ +Q+YIKGLNFKYR+DLRSKGVEY+NALGRL+D +TVVAT +  +ERVL CG +VVAVGGRP  L CEGG+LA+TSDD+F+L+T PGKTLVVGASYVALECA GFLTGLGVDTTVMVRS+LLR FDQ IAERIG FM AEGTRF+RPAVP+R
Sbjct:  325 ARLGKKVACLDFVKPSVMGSKWGLGGTCVNVGCIPKKLMHQAALLAGHAKDAPFFGWPAGPEGEDGSRLEEAGGVAGGEGKRSVTHDWEVMVQGVQNYIKGLNFKYRTDLRSKGVEYINALGRLQDAHTVVATDKNNKERVLSCGSVVVAVGGRPNQLPCEGGELAMTSDDIFALRTPPGKTLVVGASYVALECA-GFLTGLGVDTTVMVRSILLRGFDQGIAERIGSFMEAEGTRFLRPAVPQR 568          
BLAST of mRNA_H-elongata_contig109292.753.1 vs. uniprot
Match: A0A2R5GAY9_9STRA (Thioredoxin reductase SEP1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GAY9_9STRA)

HSP 1 Score: 269 bits (687), Expect = 2.120e-83
Identity = 131/234 (55.98%), Postives = 170/234 (72.65%), Query Frame = 1
Query:    1 AKLGQRVACLDFVKPSPMGTKWGLGGTCVNVGCIPKKLMHQASLIAGHVKDAKVYGWISEHKNSPTHKGCDISGHDWQSMVRAIQHYIKGLNFKYRSDLRSKGVEYLNALGRLKDVNTVVATIRGGQERVLKCGKIVVAVGGRPKPLICEGGDLAVTSDDLFSLQTHPGKTLVVGASYVALECAAGFLTGLGVDTTVMVRSVLLRRFDQDIAERIGRFMHAEGTRFIRPAVPRR 702
            ++LG +VA LDFV PSP GTKWGLGGTCVNVGCIPKKL H A+L    ++DA  +GW  +           +  H+W+ +V  +++YIK LNF Y+  LR KGV+YLN LG L D +TV    + G+E  +   +I++AVGGRP+PL CEGG+LA++SDD+F L + PGKTLVVGASYVALECA+ FLTG G DT+VMVRS+LLR FDQ +A+++G  M   GT+FIR AVPR+
Sbjct:  153 SELGAKVALLDFVVPSPHGTKWGLGGTCVNVGCIPKKLFHHAALTGEFMQDAPDFGWDVQ-----------VGAHNWEKLVDNVRNYIKSLNFGYKVQLREKGVKYLNKLGSLIDAHTVKTVDKKGKEETISAQRIIIAVGGRPRPLDCEGGELAISSDDMFYLDSAPGKTLVVGASYVALECAS-FLTGFGYDTSVMVRSILLRGFDQQMADKVGEAMEKLGTKFIRGAVPRK 374          
BLAST of mRNA_H-elongata_contig109292.753.1 vs. uniprot
Match: A0A7S2G908_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G908_9STRA)

HSP 1 Score: 250 bits (639), Expect = 2.100e-80
Identity = 130/235 (55.32%), Postives = 159/235 (67.66%), Query Frame = 1
Query:    1 AKLGQRVACLDFVKPSPMGTKWGLGGTCVNVGCIPKKLMHQASLIAGHVKDAKVYGWISEHKNSPTHK-GCDISGHDWQSMVRAIQHYIKGLNFKYRSDLRSKGVEYLNALGRLKDVNTVVATIRGGQERVLKCGKIVVAVGGRPKPLICEGGDLAVTSDDLFSLQTHP--GKTLVVGASYVALECAAGFLTGLGVDTTVMVRSVLLRRFDQDIAERIGRFMHAEGTRFIRPAVP 696
            A+LG + A LDFVKPS +G+ WGLGGTCVNVGCIPKK+MH A+L+ G ++ AK YGW     ++   K G  +  HDW  +V A+Q +I+ LNFKYR DLR  GV+Y+NALGR +D  T+      G    +   + +VAVGGRPKPL   GGD A+TSDDLFS    P  G+ LVVG SYVALECA G LTGLG D TVM RS+LLR FDQ +A+ I   M + GTRFI   VP
Sbjct:    4 ARLGAKTAVLDFVKPSSLGSTWGLGGTCVNVGCIPKKIMHHAALVGGVLQGAKQYGW----NDAAVQKLGVQVRDHDWPMLVDAVQGHIRMLNFKYRVDLRKHGVKYVNALGRFRDATTLEVVDGKGARSCMTADQFIVAVGGRPKPLDIPGGDFALTSDDLFSHSALPKHGRILVVGGSYVALECA-GLLTGLGFDVTVMYRSILLRGFDQQVADLIREDMQSRGTRFIGEVVP 233          
BLAST of mRNA_H-elongata_contig109292.753.1 vs. uniprot
Match: A0A7S2WBE6_9STRA (Hypothetical protein n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WBE6_9STRA)

HSP 1 Score: 259 bits (663), Expect = 5.680e-80
Identity = 130/232 (56.03%), Postives = 160/232 (68.97%), Query Frame = 1
Query:    1 AKLGQRVACLDFVKPSPMGTKWGLGGTCVNVGCIPKKLMHQASLIAGHVKDAKVYGWISEHKNSPTHKGCDISGHDWQSMVRAIQHYIKGLNFKYRSDLRSKGVEYLNALGRLKDVNTVVATIRGGQERVLKCGKIVVAVGGRPKPLICEGGDLAVTSDDLFSLQTHPGKTLVVGASYVALECAAGFLTGLGVDTTVMVRSVLLRRFDQDIAERIGRFMHAEGTRFIRPAVP 696
            A LG +VA LDFVKPSP GT WGLGGTCVNVGCIPKKL H ++L    + DAK +GW              +  HDW   +  +++YIK LNF Y+  LR+K V+YLN LG L D +TV    + G+E  +   +I++AVGGRPK L C G +LA+TSDD+F L+  PGKTLVVGASYVALECA+ FLTGLG DTTVMVRS+ LR FDQ +A+ +G  M   GT+FIR AVP
Sbjct:  139 AGLGAKVALLDFVKPSPQGTSWGLGGTCVNVGCIPKKLFHHSALFGEGLHDAKDFGW-----------DISVEKHDWSRFITNVRNYIKSLNFGYKVQLRTKQVKYLNKLGSLVDAHTVSCVDKKGKEEKITAKRILIAVGGRPKQLQCPGSELAITSDDMFFLEKPPGKTLVVGASYVALECAS-FLTGLGYDTTVMVRSIFLRGFDQQMADMVGDAMQKTGTKFIRSAVP 358          
BLAST of mRNA_H-elongata_contig109292.753.1 vs. uniprot
Match: A0A7S1VBB9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VBB9_9STRA)

HSP 1 Score: 252 bits (643), Expect = 4.170e-79
Identity = 122/237 (51.48%), Postives = 165/237 (69.62%), Query Frame = 1
Query:    1 AKLGQRVACLDFVKPSPMGTKWGLGGTCVNVGCIPKKLMHQASLIAGHVK-DAKVYGWI--SEHKNSPTHKGCDISGHDWQSMVRAIQHYIKGLNFKYRSDLRSKGVEYLNALGRLKDVNTVVATIRGGQERVLKCGKIVVAVGGRPKPLICEGGDLAVTSDDLFSLQTHPGKTLVVGASYVALECAAGFLTGLGVDTTVMVRSVLLRRFDQDIAERIGRFMHAEGTRFIRPAVPRR 702
            A LG +VAC+DFVKPSP GT WGLGGTCVNVGCIPKKLMH  +L+   +  DA+ +G    S   +  T+   D     W+ +   +Q+YI+ LNFKYR   R K V Y+N L + KD +T+ AT + G+   +   + ++AVGGRP PL CEGG+LA++SDD+F+L+++PGKTL VGASY++LECA GFL G G+D TV VRS+LLR FD++ A++IG FM   G +F R  VP++
Sbjct:  157 ADLGAKVACMDFVKPSPQGTSWGLGGTCVNVGCIPKKLMHAGALLRESIHADAEAFGLQIPSGSSDGGTNGNSDFK---WEQLRENVQNYIRSLNFKYRVAFREKNVTYMNKLAKFKDAHTIEATDKKGRTSEVTAARFIIAVGGRPSPLTCEGGELAISSDDIFALESNPGKTLCVGASYISLECA-GFLAGFGIDVTVAVRSILLRGFDRECADKIGAFMEDHGVKFKRGVVPKK 389          
BLAST of mRNA_H-elongata_contig109292.753.1 vs. uniprot
Match: V4AUG6_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4AUG6_LOTGI)

HSP 1 Score: 254 bits (649), Expect = 5.090e-79
Identity = 132/233 (56.65%), Postives = 167/233 (71.67%), Query Frame = 1
Query:    1 AKLGQRVACLDFVKPSPMGTKWGLGGTCVNVGCIPKKLMHQASLIAGHVKDAKVYGWISEHKNSPTHKGCDISGHDWQSMVRAIQHYIKGLNFKYRSDLRSKGVEYLNALGRLKDVNTVVATIRGGQERVLKCGKIVVAVGGRPK-PLICEGGDLAVTSDDLFSLQTHPGKTLVVGASYVALECAAGFLTGLGVDTTVMVRSVLLRRFDQDIAERIGRFMHAEGTRFIRPAVP 696
            ++LGQ+VA LDFVKPS  GTKWGLGGTCVNVGCIPKKL+HQA+L+   ++DAK YGW     N P+    DI+ H W+SM   +Q+Y++ LN+ +R  L+ K VEY+NA+G L D +TV      G+ER+L    IV+AVGGRP+ P I      ++TSDDLF +   PGKTLVVGASY+ALEC  GFLTGLG DTTVMVRS+LLR FDQ +A  IG +M   GT+F+R  +P
Sbjct:   21 SQLGQKVAVLDFVKPSTQGTKWGLGGTCVNVGCIPKKLIHQAALLGHSIQDAKYYGW-----NIPS----DIT-HSWESMCDNVQNYVRSLNWGHRVQLKDKNVEYINAVGTLVDKHTVKTVDGKGKERLLSTDNIVIAVGGRPRLPDIPGALQYSITSDDLFWMTKPPGKTLVVGASYIALECG-GFLTGLGFDTTVMVRSILLRGFDQQMANHIGDYMSNNGTKFLRECIP 242          
BLAST of mRNA_H-elongata_contig109292.753.1 vs. uniprot
Match: A0A7S0QLL0_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QLL0_9CRYP)

HSP 1 Score: 248 bits (633), Expect = 1.250e-78
Identity = 135/234 (57.69%), Postives = 160/234 (68.38%), Query Frame = 1
Query:    1 AKLGQRVACLDFVKPSPMGTKWGLGGTCVNVGCIPKKLMHQASLIAGHVKDAKVYGW-ISEHKNSPTHKGCDISGHDWQSMVRAIQHYIKGLNFKYRSDLRSKGVEYLNALGRLKDVNTVVATIRGGQERVLKCGKIVVAVGGRPKPL-ICEGGDLAVTSDDLFSLQTHPGKTLVVGASYVALECAAGFLTGLGVDTTVMVRSVLLRRFDQDIAERIGRFMHAEGTRFIRPAVP 696
            A  G +VA  DFV P+P+GT WGLGGTCVNVGCIPKKLMHQA L+   V+DAK +GW I E K+           HDW +MV  +Q +I  LNF+YRS+LRSKGVEY+NAL R  D +TV  T + G          VVA GGRPK L I    +  +TSDDLFSL+  PGKTLVVGASYVALECA GFL GLG DTTVM+RS+ LR FDQ+ AERI ++M   G +FIR  +P
Sbjct:   33 ASHGVKVAVADFVTPTPIGTTWGLGGTCVNVGCIPKKLMHQACLLGEAVEDAKSFGWKIPEGKS-----------HDWSTMVSNVQDHICSLNFRYRSELRSKGVEYINALARFVDDHTVELTDKKGNVTRKTAEHFVVATGGRPKYLGIPNERECCITSDDLFSLKKPPGKTLVVGASYVALECA-GFLAGLGYDTTVMMRSIPLRGFDQEFAERICKYMSEHGVKFIRGCIP 254          
BLAST of mRNA_H-elongata_contig109292.753.1 vs. uniprot
Match: A0A6U0BL67_9CHLO (Hypothetical protein n=2 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A6U0BL67_9CHLO)

HSP 1 Score: 253 bits (647), Expect = 1.390e-78
Identity = 128/233 (54.94%), Postives = 159/233 (68.24%), Query Frame = 1
Query:    1 AKLGQRVACLDFVKPSPMGTKWGLGGTCVNVGCIPKKLMHQASLIAGHVKDAKVYGWISEHKNSPTHKGCDISGHDWQSMVRAIQHYIKGLNFKYRSDLRSKGVEYLNALGRLKDVNTVVATIRGGQERVLKCGKIVVAVGGRPKPLICEGG-DLAVTSDDLFSLQTHPGKTLVVGASYVALECAAGFLTGLGVDTTVMVRSVLLRRFDQDIAERIGRFMHAEGTRFIRPAVP 696
            AKLG +  CLDFVKPSP GT WGLGGTCVNVGCIPKKLMHQA ++     DA+ YGW  E            +GHDW+ MV  +Q++I  LNF YR+ LR   V YLNA G LKD +TVVAT + G E+V+   KIV+AVGGRP      G  +  +TSDD+FSL   PGKTL VGASY++LE  AGFLT LG +T+V +RS+ LR FDQ++AE+I  +M   GT+F+R + P
Sbjct:   30 AKLGAKTVCLDFVKPSPAGTTWGLGGTCVNVGCIPKKLMHQAGILGEQFSDAREYGWKLES-----------TGHDWEKMVEQVQNHIGSLNFGYRTALREANVTYLNAYGSLKDAHTVVATKKNGTEQVITADKIVIAVGGRPSYPDAPGAKEYCITSDDVFSLPKAPGKTLCVGASYISLE-TAGFLTALGFETSVAIRSIPLRGFDQEVAEKIVSYMSTHGTKFLRDSQP 250          
BLAST of mRNA_H-elongata_contig109292.753.1 vs. uniprot
Match: UPI000F7C5C52 (thioredoxin reductase 2, mitochondrial isoform X2 n=1 Tax=Anas platyrhynchos TaxID=8839 RepID=UPI000F7C5C52)

HSP 1 Score: 248 bits (634), Expect = 3.850e-78
Identity = 123/234 (52.56%), Postives = 164/234 (70.09%), Query Frame = 1
Query:    1 AKLGQRVACLDFVKPSPMGTKWGLGGTCVNVGCIPKKLMHQASLIAGHVKDAKVYGWISEHKNSPTHKGCDISGHDWQSMVRAIQHYIKGLNFKYRSDLRSKGVEYLNALGRLKDVNTVVATIRGGQERVLKCGKIVVAVGGRPK-PLICEGG-DLAVTSDDLFSLQTHPGKTLVVGASYVALECAAGFLTGLGVDTTVMVRSVLLRRFDQDIAERIGRFMHAEGTRFIRPAVP 696
            A+ G++VA LD+V+PSP GTKWGLGGTCVNVGCIPKKLMHQA+L+   +KDA+ YGW   H   P H       H+W  M +A+Q+Y+K LN+ +R  L+ K V+Y N  G   D +T+    +GG+E +L   KIV+A GGRPK P    G  +  +TSDDLF L+  PGKTLVVGASY++LECA GFLTG+G+DTTVM+RS+ LR FDQ +A  +  +M + GT+F++  +P
Sbjct:   49 AQFGRKVAVLDYVEPSPQGTKWGLGGTCVNVGCIPKKLMHQAALLGSALKDAQRYGWNIAH---PVH-------HNWSEMAQAVQNYVKSLNWGHRVQLQDKKVKYFNVKGSFSDPHTIRGLTKGGKETILTAEKIVIATGGRPKYPTHVAGALEYGITSDDLFWLKESPGKTLVVGASYISLECA-GFLTGIGLDTTVMMRSIPLRGFDQQMASLVTEYMESYGTKFLKKCIP 271          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109292.753.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIP0_9PHAE3.150e-11770.20Pyr_redox_2 domain-containing protein n=1 Tax=Ecto... [more]
D8LJA3_ECTSI9.180e-11270.20Thioredoxin reductase n=1 Tax=Ectocarpus siliculos... [more]
A0A2R5GAY9_9STRA2.120e-8355.98Thioredoxin reductase SEP1 n=1 Tax=Hondaea ferment... [more]
A0A7S2G908_9STRA2.100e-8055.32Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2WBE6_9STRA5.680e-8056.03Hypothetical protein n=2 Tax=labyrinthulid quahog ... [more]
A0A7S1VBB9_9STRA4.170e-7951.48Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
V4AUG6_LOTGI5.090e-7956.65Uncharacterized protein n=1 Tax=Lottia gigantea Ta... [more]
A0A7S0QLL0_9CRYP1.250e-7857.69Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A6U0BL67_9CHLO1.390e-7854.94Hypothetical protein n=2 Tax=Ostreococcus mediterr... [more]
UPI000F7C5C523.850e-7852.56thioredoxin reductase 2, mitochondrial isoform X2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig109292contigH-elongata_contig109292:126..2200 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score347.1
Seed ortholog evalue6.7e-93
Seed eggNOG ortholog2880.D8LJA3
Preferred nameTXNRD1
KEGG rclassRC02518,RC02873
KEGG koko:K22182
KEGG ReactionR03596,R09372
KEGG Pathwayko00450,ko05200,ko05225,map00450,map05200,map05225
GOsGO:0000003,GO:0000302,GO:0000305,GO:0001650,GO:0001704,GO:0001707,GO:0001887,GO:0001890,GO:0003006,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005783,GO:0005829,GO:0006082,GO:0006139,GO:0006518,GO:0006520,GO:0006575,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006749,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007154,GO:0007165,GO:0007275,GO:0007369,GO:0007498,GO:0008150,GO:0008152,GO:0008283,GO:0009056,GO:0009069,GO:0009117,GO:0009611,GO:0009628,GO:0009636,GO:0009653,GO:0009790,GO:0009888,GO:0009987,GO:0010035,GO:0010038,GO:0010269,GO:0010941,GO:0010942,GO:0012505,GO:0015036,GO:0015949,GO:0016043,GO:0016174,GO:0016209,GO:0016259,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016999,GO:0017001,GO:0017144,GO:0018996,GO:0019216,GO:0019222,GO:0019362,GO:0019637,GO:0019725,GO:0019752,GO:0022404,GO:0022414,GO:0022607,GO:0023052,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0033554,GO:0033797,GO:0034599,GO:0034641,GO:0036295,GO:0036296,GO:0036477,GO:0042221,GO:0042303,GO:0042395,GO:0042493,GO:0042537,GO:0042592,GO:0042737,GO:0042743,GO:0042744,GO:0042802,GO:0042803,GO:0043025,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0043603,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044297,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0045340,GO:0045454,GO:0046483,GO:0046496,GO:0046688,GO:0046872,GO:0046914,GO:0046983,GO:0048332,GO:0048513,GO:0048518,GO:0048522,GO:0048598,GO:0048608,GO:0048646,GO:0048678,GO:0048729,GO:0048731,GO:0048856,GO:0050664,GO:0050789,GO:0050794,GO:0050896,GO:0051186,GO:0051187,GO:0051259,GO:0051262,GO:0051716,GO:0055086,GO:0055093,GO:0055114,GO:0061458,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070276,GO:0070482,GO:0070887,GO:0070995,GO:0071241,GO:0071248,GO:0071280,GO:0071453,GO:0071455,GO:0071704,GO:0071840,GO:0072524,GO:0072593,GO:0080090,GO:0097237,GO:0097458,GO:0098623,GO:0098625,GO:0098626,GO:0098754,GO:0098869,GO:1901360,GO:1901564,GO:1901605,GO:1901700,GO:1990748
EggNOG free text desc.thioredoxin-disulfide reductase activity
EggNOG OGsCOG1249@1,KOG4716@2759
Ec32 ortholog descriptionThioredoxin reductase
Ec32 orthologEc-02_005330.1
EC1.8.1.9
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons5
Model size705
Cds size705
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig109292.753.1prot_H-elongata_contig109292.753.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig109292 126..2200 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929620.2900279-CDS-H-elongata_contig109292:125..2771622929620.2900279-CDS-H-elongata_contig109292:125..277Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109292 126..277 -
1691679094.0861897-CDS-H-elongata_contig109292:125..2771691679094.0861897-CDS-H-elongata_contig109292:125..277Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109292 126..277 -
1622929620.3123116-CDS-H-elongata_contig109292:454..6261622929620.3123116-CDS-H-elongata_contig109292:454..626Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109292 455..626 -
1691679094.0994327-CDS-H-elongata_contig109292:454..6261691679094.0994327-CDS-H-elongata_contig109292:454..626Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109292 455..626 -
1622929620.3341954-CDS-H-elongata_contig109292:993..10651622929620.3341954-CDS-H-elongata_contig109292:993..1065Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109292 994..1065 -
1691679094.108847-CDS-H-elongata_contig109292:993..10651691679094.108847-CDS-H-elongata_contig109292:993..1065Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109292 994..1065 -
1622929620.3478353-CDS-H-elongata_contig109292:1344..15301622929620.3478353-CDS-H-elongata_contig109292:1344..1530Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109292 1345..1530 -
1691679094.1231546-CDS-H-elongata_contig109292:1344..15301691679094.1231546-CDS-H-elongata_contig109292:1344..1530Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109292 1345..1530 -
1622929620.3603897-CDS-H-elongata_contig109292:2077..22001622929620.3603897-CDS-H-elongata_contig109292:2077..2200Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109292 2078..2200 -
1691679094.1377635-CDS-H-elongata_contig109292:2077..22001691679094.1377635-CDS-H-elongata_contig109292:2077..2200Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109292 2078..2200 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig109292.753.1

>prot_H-elongata_contig109292.753.1 ID=prot_H-elongata_contig109292.753.1|Name=mRNA_H-elongata_contig109292.753.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=235bp
AKLGQRVACLDFVKPSPMGTKWGLGGTCVNVGCIPKKLMHQASLIAGHVK
DAKVYGWISEHKNSPTHKGCDISGHDWQSMVRAIQHYIKGLNFKYRSDLR
SKGVEYLNALGRLKDVNTVVATIRGGQERVLKCGKIVVAVGGRPKPLICE
GGDLAVTSDDLFSLQTHPGKTLVVGASYVALECAAGFLTGLGVDTTVMVR
SVLLRRFDQDIAERIGRFMHAEGTRFIRPAVPRR*
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mRNA from alignment at H-elongata_contig109292:126..2200-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig109292.753.1 ID=mRNA_H-elongata_contig109292.753.1|Name=mRNA_H-elongata_contig109292.753.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2075bp|location=Sequence derived from alignment at H-elongata_contig109292:126..2200- (Himanthalia elongata Himel1 dioecious)
GCGAAGCTGGGGCAGAGAGTGGCGTGCTTGGATTTTGTCAAACCTTCTCC TATGGGCACCAAGTGGGGGCTTGGGGGAACGTGTGTGAACGTCGGGTGCA TTCCAAAGAAACTCATGCACCAGGTGTGATTCCGTCCGGTAAAGCCTTAG GGTTAGGGTTATATTAAGGGTACCAATATCGCGAAAGCATCCAAGAGTGA GTAGGCTACCCATCCTTCAGCGTCAGTCTTTTATTTTATTTTTATTTTTA TCTCGCTTTCTGTCGGTGAAGCCAAGACAACTCTCACCCTAACCCTAACC CAAGACAACCCTAATTCTAACCCTAATCCTAAATCTAGGTTATTACCACC AATCCCATTTATTAGTACCGCAACACTGCATATCCCACCATAACCTGTTC TACCCACATCTCCCCGGTTCACGCCTAGCCTTAATCCTAACCCTAATGCC ATTAATAGTGATACCTATAGGCTTTTTGTCGCTATCGATGCAAGTTCAGC ACCCCTAACCCTAACCCAAATAACAATGGTTAAACGCAGAGTCAGTCTTA CACCAGCCAATGACACTAGTCTTACACAAGTGCGAAGTATTTCTATCATT AATAGTATTAATAGGCAGTAACACACTTCCCTAACGATCTTTGCCGTGCC CTTGGGGGATGGCTGTTCAGGCCTCCCTGATCGCCGGTCACGTGAAAGAT GCCAAGGTATACGGGTGGATTTCGGAGCACAAGAACAGCCCAACACACAA GGGCTGCGACATTTCTGGTCACGACTGGCAGAGTATGGTTCGAGCGATTC AGCACTACATCAAGGGGCTCAACTTCAAATATAGGAGCGATTTGCGTTCG AAAGGAGTGAGTTTCGCGGAAATCACAGTCACACCTTCAGCGTCCATGTC CACGTTTCTTTATTTCATTATATTCCTACCTAATCCCGTGACCCTAATCC TAACCATAACCCTAGCACCACTAGACATTGCCGATTTCGACGATCCCGGT CATCCATCAATCGAAGTTTGTGTGTCATCTGTGATGTGTACAGGAGCTAG CGCTGCCTTCCATTCACTAAACAAGCCGCGTACTTTGCGGTTATTTGGGT TATTTGAATTCTCTTGGCCGCGGAGGGGAGGGCAGGTGGAATATTTGAAT GCTCTCGGACGACTAAAAGACGTCAACACAGTTGTAGCGACGATCCGGGG AGGGCAGGTGAGGATTTTTAGTTCCAGGTATCAGCCAGTTAGCTTGGCCA ACACTCTGCCCGATGCCTGACCCGTCAAAGCCTTTCGATTTGCGAGTACT CTATCCCCGCTCGGGTTGTTTTAACTATAGGGTTAGGGTTAGGGAGGAAG TACTACATATGCTTAAATAAGCTGTTGCCTCCAAGTTCAAGCTTCTAACA CTAACTCTGGCACTTAAACTGCGAATGAAATAAAATATATAGAGCCCACC TATTGGCTACAAAAAGCGAAAGTCTTAACCAACTGTTGCAGCTACTTTCA AAGTGCCGTACAAATAAATGTCCATGTCCTCTTCAAACACTCTCGCCGCC TTTGTAATTGCTGATTCCGACCAGGAGCGTGTCCTTAAGTGCGGGAAAAT TGTGGTGGCGGTTGGCGGCAGACCGAAGCCGCTTATTTGCGAAGGCGGTG ATCTGGCCGTGACGTCTGATGACCTCTTTTCTCTGCAGACACACCCGGGG AAGACCCTAGTCGTGGGCGCGAGCTACGTGGCTCTGGAGTGCGCGGGTGT GGCTTGGTCATTTTCCACCTCTTGTTTGATCGGACAAGGGTTAGGGTTAG GATGAGGGTTAGGGTCAAGACGTGGCTGATCCAGAAGGCAAGAGGTAGTA GACGCAATCGGCGCCACGATTTGTTTTTCCCAAAGTAAAAATAGTATGTT TATTTGTTTTTGACGCGGCTGAGCAGGTTTCCTGACTGGACTAGGTGTCG ACACGACGGTAATGGTACGGTCTGTTCTCCTGCGGAGGTTTGACCAGGAT ATCGCGGAACGAATAGGGCGATTCATGCACGCCGAGGGAACTCGATTCAT CAGACCCGCTGTGCCGCGTCGGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig109292:126..2200-

>mRNA_H-elongata_contig109292.753.1 ID=mRNA_H-elongata_contig109292.753.1|Name=mRNA_H-elongata_contig109292.753.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1410bp|location=Sequence derived from alignment at H-elongata_contig109292:126..2200- (Himanthalia elongata Himel1 dioecious)
GCGAAGCTGGGGCAGAGAGTGGCGTGCTTGGATTTTGTCAAACCTTCTCC
TATGGGCACCAAGTGGGGGCTTGGGGGAACGTGTGTGAACGTCGGGTGCA
TTCCAAAGAAACTCATGCACCAGGCGAAGCTGGGGCAGAGAGTGGCGTGC
TTGGATTTTGTCAAACCTTCTCCTATGGGCACCAAGTGGGGGCTTGGGGG
AACGTGTGTGAACGTCGGGTGCATTCCAAAGAAACTCATGCACCAGGCCT
CCCTGATCGCCGGTCACGTGAAAGATGCCAAGGTATACGGGTGGATTTCG
GAGCACAAGAACAGCCCAACACACAAGGGCTGCGACATTTCTGGTCACGA
CTGGCAGAGTATGGTTCGAGCGATTCAGCACTACATCAAGGGGCTCAACT
TCAAATATAGGAGCGATTTGCGTTCGAAAGGAGCCTCCCTGATCGCCGGT
CACGTGAAAGATGCCAAGGTATACGGGTGGATTTCGGAGCACAAGAACAG
CCCAACACACAAGGGCTGCGACATTTCTGGTCACGACTGGCAGAGTATGG
TTCGAGCGATTCAGCACTACATCAAGGGGCTCAACTTCAAATATAGGAGC
GATTTGCGTTCGAAAGGAGTGGAATATTTGAATGCTCTCGGACGACTAAA
AGACGTCAACACAGTTGTAGCGACGATCCGGGGAGGGCAGGTGGAATATT
TGAATGCTCTCGGACGACTAAAAGACGTCAACACAGTTGTAGCGACGATC
CGGGGAGGGCAGGAGCGTGTCCTTAAGTGCGGGAAAATTGTGGTGGCGGT
TGGCGGCAGACCGAAGCCGCTTATTTGCGAAGGCGGTGATCTGGCCGTGA
CGTCTGATGACCTCTTTTCTCTGCAGACACACCCGGGGAAGACCCTAGTC
GTGGGCGCGAGCTACGTGGCTCTGGAGTGCGCGGGAGCGTGTCCTTAAGT
GCGGGAAAATTGTGGTGGCGGTTGGCGGCAGACCGAAGCCGCTTATTTGC
GAAGGCGGTGATCTGGCCGTGACGTCTGATGACCTCTTTTCTCTGCAGAC
ACACCCGGGGAAGACCCTAGTCGTGGGCGCGAGCTACGTGGCTCTGGAGT
GCGCGGCAGGTTTCCTGACTGGACTAGGTGTCGACACGACGGTAATGGTA
CGGTCTGTTCTCCTGCGGAGGTTTGACCAGGATATCGCGGAACGAATAGG
GCGATTCATGCACGCCGAGGGAACTCGATTCATCAGACCCGCTGTGCCGC
GTCGGTGACAGGTTTCCTGACTGGACTAGGTGTCGACACGACGGTAATGG
TACGGTCTGTTCTCCTGCGGAGGTTTGACCAGGATATCGCGGAACGAATA
GGGCGATTCATGCACGCCGAGGGAACTCGATTCATCAGACCCGCTGTGCC
GCGTCGGTGA
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