prot_H-elongata_contig109270.751.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig109270.751.1
Unique Nameprot_H-elongata_contig109270.751.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length105
Homology
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BLAST of mRNA_H-elongata_contig109270.751.1 vs. uniprot
Match: D7FH38_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FH38_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 3.460e-5
Identity = 23/28 (82.14%), Postives = 26/28 (92.86%), Query Frame = 0 
Query:   78 QADFEAHTGDHGSTPLHVAAISGFDEVI 105
            +AD+EA T DHGSTPLHVAAISGFDEV+
Sbjct:  281 RADYEAVTEDHGSTPLHVAAISGFDEVL 308
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109270.751.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FH38_ECTSI3.460e-582.14Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 53..83
e-value: 6.6E-4
score: 29.0
coord: 20..49
e-value: 4.3E-4
score: 29.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 88..105
score: 9.164
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 53..77
score: 10.633
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 20..52
score: 10.659
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 3..81
e-value: 1.4E-13
score: 51.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..105
score: 30.715
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..105
e-value: 3.7E-31
score: 110.1
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 3..104
NoneNo IPR availablePANTHERPTHR24133:SF33ANKYRIN, ISOFORM Bcoord: 3..74
coord: 40..104
NoneNo IPR availablePANTHERPTHR24133FAMILY NOT NAMEDcoord: 3..74
coord: 40..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig109270contigH-elongata_contig109270:35..2092 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig109270.751.1mRNA_H-elongata_contig109270.751.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig109270 14..2092 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig109270.751.1 ID=prot_H-elongata_contig109270.751.1|Name=mRNA_H-elongata_contig109270.751.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=105bp
MGAVRELLEAVANPNAQDAEGCTPVFLAAQEGHEEVVVDLLRNGASPDIC
REDGWTPLHAAARFGHTSTVMALLREGQADFEAHTGDHGSTPLHVAAISG
FDEVI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf