prot_H-elongata_contig109260.750.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig109260.750.1
Unique Nameprot_H-elongata_contig109260.750.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length89
Homology
BLAST of mRNA_H-elongata_contig109260.750.1 vs. uniprot
Match: A0A6H5L0C8_9PHAE (Alanine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0C8_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 2.000e-45
Identity = 73/89 (82.02%), Postives = 79/89 (88.76%), Query Frame = 0
Query:    1 LQQFKPLFLGTADPALGLSKLTRVANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKEEAIGWAWDCLTNVSPTEHTNLY 89
            + QFKPLFLGTADPAL LSKLTR  NSQKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGSYFKEEAIG+AW+CLT V   + + LY
Sbjct:    1 MNQFKPLFLGTADPALPLSKLTRATNSQKCIRAGGKHNDLDDVGKDLYHHTFFEMLGNWSFGSYFKEEAIGYAWECLTTVYKLDPSRLY 89          
BLAST of mRNA_H-elongata_contig109260.750.1 vs. uniprot
Match: D7FPP9_ECTSI (Alanine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP9_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 3.600e-45
Identity = 73/89 (82.02%), Postives = 79/89 (88.76%), Query Frame = 0
Query:    1 LQQFKPLFLGTADPALGLSKLTRVANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKEEAIGWAWDCLTNVSPTEHTNLY 89
            + QFKPLFLGTADPAL LSKLTR  NSQKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGSYFKEEAIG+AW+CLT V   + + LY
Sbjct:   73 MNQFKPLFLGTADPALPLSKLTRATNSQKCIRAGGKHNDLDDVGKDLYHHTFFEMLGNWSFGSYFKEEAIGYAWECLTTVYKLDPSRLY 161          
BLAST of mRNA_H-elongata_contig109260.750.1 vs. uniprot
Match: A0A834SDI7_9FABA (Alanine--tRNA ligase n=1 Tax=Senna tora TaxID=362788 RepID=A0A834SDI7_9FABA)

HSP 1 Score: 155 bits (393), Expect = 1.760e-44
Identity = 69/87 (79.31%), Postives = 73/87 (83.91%), Query Frame = 0
Query:    1 LQQFKPLFLGTADPALGLSKLTRVANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKEEAIGWAWDCLTNVS--PTEH 85
            + QFKP+FLGT DP  GLSKLTR  N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFG YFKEEAIGWAW+ LT V   PT H
Sbjct:  140 MNQFKPIFLGTVDPNTGLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEEAIGWAWELLTKVYKLPTNH 226          
BLAST of mRNA_H-elongata_contig109260.750.1 vs. uniprot
Match: A0A7S2Y168_9STRA (Alanine--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y168_9STRA)

HSP 1 Score: 158 bits (399), Expect = 3.850e-44
Identity = 68/89 (76.40%), Postives = 75/89 (84.27%), Query Frame = 0
Query:    1 LQQFKPLFLGTADPALGLSKLTRVANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKEEAIGWAWDCLTNVSPTEHTNLY 89
            + Q+KPLFLGT DP L +SKLTR  NSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFG YFKE+AI WAW+CLT V   + + LY
Sbjct:   94 MNQYKPLFLGTCDPKLPMSKLTRAVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKEQAITWAWECLTEVFGLDESRLY 182          
BLAST of mRNA_H-elongata_contig109260.750.1 vs. uniprot
Match: A0A0D2ZWB7_BRAOL (Alanine--tRNA ligase n=2 Tax=Brassica TaxID=3705 RepID=A0A0D2ZWB7_BRAOL)

HSP 1 Score: 148 bits (373), Expect = 1.140e-43
Identity = 64/81 (79.01%), Postives = 70/81 (86.42%), Query Frame = 0
Query:    1 LQQFKPLFLGTADPALGLSKLTRVANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKEEAIGWAWDCLTNVS 81
            + Q+KP+FLGTADP   LSKLTR  N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFG YFK+EAI WAW+ LT VS
Sbjct:   94 MNQYKPIFLGTADPNTELSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIEWAWELLTKVS 174          
BLAST of mRNA_H-elongata_contig109260.750.1 vs. uniprot
Match: A0A2P5AYY8_PARAD (Alanine--tRNA ligase n=1 Tax=Parasponia andersonii TaxID=3476 RepID=A0A2P5AYY8_PARAD)

HSP 1 Score: 149 bits (375), Expect = 1.370e-43
Identity = 64/89 (71.91%), Postives = 71/89 (79.78%), Query Frame = 0
Query:    1 LQQFKPLFLGTADPALGLSKLTRVANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKEEAIGWAWDCLTNVSPTEHTNLY 89
            + QFKP+FLG  DP   LSKLTR  N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFG YFK+EAIGWAW+ LT  S +   + Y
Sbjct:  112 MNQFKPIFLGQVDPNTALSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIGWAWELLTKASASALLSTY 200          
BLAST of mRNA_H-elongata_contig109260.750.1 vs. uniprot
Match: UPI00053A6D95 (alanine--tRNA ligase-like n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI00053A6D95)

HSP 1 Score: 144 bits (364), Expect = 2.390e-43
Identity = 62/77 (80.52%), Postives = 66/77 (85.71%), Query Frame = 0
Query:    4 FKPLFLGTADPALGLSKLTRVANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKEEAIGWAWDCLTNV 80
            +KP+FLGTADP   LSKLTR  N+Q CIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFG YFK EAIGWAW+ LT V
Sbjct:   18 YKPIFLGTADPNTELSKLTRACNTQNCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIGWAWELLTKV 94          
BLAST of mRNA_H-elongata_contig109260.750.1 vs. uniprot
Match: A0A7S1TRR3_9STRA (Alanine--tRNA ligase (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRR3_9STRA)

HSP 1 Score: 152 bits (384), Expect = 4.860e-43
Identity = 63/79 (79.75%), Postives = 72/79 (91.14%), Query Frame = 0
Query:    1 LQQFKPLFLGTADPALGLSKLTRVANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKEEAIGWAWDCLTN 79
            + Q+KPLFLGT DP+L ++KLTR  NSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFK EA+ W+W+CLT+
Sbjct:   86 MNQYKPLFLGTCDPSLDMAKLTRACNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKAEAVAWSWECLTS 164          
BLAST of mRNA_H-elongata_contig109260.750.1 vs. uniprot
Match: A0A1S4DWP3_CUCME (Alanine--tRNA ligase n=1 Tax=Cucumis melo TaxID=3656 RepID=A0A1S4DWP3_CUCME)

HSP 1 Score: 144 bits (364), Expect = 8.390e-43
Identity = 62/89 (69.66%), Postives = 69/89 (77.53%), Query Frame = 0
Query:    1 LQQFKPLFLGTADPALGLSKLTRVANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKEEAIGWAWDCLTNVSPTEHTNLY 89
            + QFKP+FLGT DP   LSKLTR  N+QKCI AGG+HNDLDDVGKD YHHTFFEMLGNWSFG YFK+EAI WAW+ LT V       +Y
Sbjct:    1 MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIY 89          
BLAST of mRNA_H-elongata_contig109260.750.1 vs. uniprot
Match: A0A2K3MH11_TRIPR (Alanine--tRNA ligase n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MH11_TRIPR)

HSP 1 Score: 145 bits (366), Expect = 2.240e-42
Identity = 62/78 (79.49%), Postives = 68/78 (87.18%), Query Frame = 0
Query:    1 LQQFKPLFLGTADPALGLSKLTRVANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKEEAIGWAWDCLT 78
            + Q+KP+FLGTADP   LSKL+R  N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFG YFKEEAI WAW+ LT
Sbjct:   96 MNQYKPIFLGTADPNTALSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEEAITWAWELLT 173          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109260.750.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0C8_9PHAE2.000e-4582.02Alanine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1... [more]
D7FPP9_ECTSI3.600e-4582.02Alanine--tRNA ligase n=1 Tax=Ectocarpus siliculosu... [more]
A0A834SDI7_9FABA1.760e-4479.31Alanine--tRNA ligase n=1 Tax=Senna tora TaxID=3627... [more]
A0A7S2Y168_9STRA3.850e-4476.40Alanine--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A0D2ZWB7_BRAOL1.140e-4379.01Alanine--tRNA ligase n=2 Tax=Brassica TaxID=3705 R... [more]
A0A2P5AYY8_PARAD1.370e-4371.91Alanine--tRNA ligase n=1 Tax=Parasponia andersonii... [more]
UPI00053A6D952.390e-4380.52alanine--tRNA ligase-like n=1 Tax=Camelina sativa ... [more]
A0A7S1TRR3_9STRA4.860e-4379.75Alanine--tRNA ligase (Fragment) n=2 Tax=Phaeomonas... [more]
A0A1S4DWP3_CUCME8.390e-4369.66Alanine--tRNA ligase n=1 Tax=Cucumis melo TaxID=36... [more]
A0A2K3MH11_TRIPR2.240e-4279.49Alanine--tRNA ligase n=1 Tax=Trifolium pratense Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.930.10coord: 1..89
e-value: 8.3E-38
score: 132.2
NoneNo IPR availablePANTHERPTHR11777:SF9ALANINE--TRNA LIGASE, CYTOPLASMICcoord: 2..89
NoneNo IPR availablePANTHERPTHR11777ALANYL-TRNA SYNTHETASEcoord: 2..89
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 2..89
IPR018164Alanyl-tRNA synthetase, class IIc, N-terminalPFAMPF01411tRNA-synt_2ccoord: 2..82
e-value: 1.1E-38
score: 133.2
IPR018165Alanyl-tRNA synthetase, class IIc, core domainPROSITEPS50860AA_TRNA_LIGASE_II_ALAcoord: 1..89
score: 17.965

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig109260contigH-elongata_contig109260:1225..1774 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig109260.750.1mRNA_H-elongata_contig109260.750.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig109260 1225..1774 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig109260.750.1 ID=prot_H-elongata_contig109260.750.1|Name=mRNA_H-elongata_contig109260.750.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=89bp
LQQFKPLFLGTADPALGLSKLTRVANSQKCIRAGGKHNDLDDVGKDVYHH
TFFEMLGNWSFGSYFKEEAIGWAWDCLTNVSPTEHTNLY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018164Ala-tRNA-synth_IIc_N
IPR018165Ala-tRNA-synth_IIc_core