mRNA_H-elongata_contig10909.734.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig10909.734.1 vs. uniprot
Match: A0A6H5LDE6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDE6_9PHAE) HSP 1 Score: 366 bits (939), Expect = 2.740e-104 Identity = 263/772 (34.07%), Postives = 385/772 (49.87%), Query Frame = 2
Query: 299 LSFLLACGAKVTTGADGHVDDISDSLGLVELKKCFRQAISAVENPFIPGMMLSLALVIEAPTAKADERRKLTELREMVEELLLEVLERMPQTVLGFPGGAAACSLLFEPENTGTRSESFKGPLKTAFSKHHLITTFCTQPLIVDFISHTFGAGLLNLRSRIPSVAAGML--KKVDPAVVVRDPLAAD---------LQR-------NRTTLFPGAQFIFVGIVAMPFTYYRVPLLRMWLDLAVFVIFLAVYTIVVANMYDKSSANAPEIALGFYVIAAIMAEAGAVGRSNREYLRDSWNWLDVPAIFLLSAGFVVRIWTTLSGNDTEQVGEACYLLGAPLLFPRILFFAQIHPSQGALLQ-----------FSIIMIVVMMGFVVSFWASSERYRIVNEDESATFDLMWVAVFKAMLGDFGDVESLTEEP-DWVDRLLFVFYLIVMTIMLLNLLIAILSTAHANIEERAETEIKASKVRTMEHYRRVVVNNVLPAPLNLLQLLALFPILVIDLCIH---------------------------------RGLYDRLKPTIAR-IMGSFVFWATLSPVAIALSSLLWFVSTPTIIISRWDQNA--SLWGNVSRSVAAVFESLIAVPLTLFWLWALGVVNGARQIV------------DLAQGRRLEIPTSVSFLSNMPQVPTTVGE-----------ILMTE--GRLSVHELSACLEDPMSDPEVRRDEENRPTTVQHIKLLRNRLEATRADHLVDIMAHIESAANAREGRLE 2341
L++LL GAK T + +S+ + LK+ AIS+ NPFIPGM LS+A A E+R+L ++ V+ELLLEVLE MPQTV GF G CS +FEPE +R ++GPL SK + T+CT PL++DF++ F GL +LR G+L K + L A+ LQR + T FPGA+FI G ++ P +YY+VP LRM LDL ++ + ++ V +++ EI Y+ I+ E + EY+RD WN LDV ++ LL G + R++ G ++ A Y L APL F RILFFAQI PSQG ++Q F +IM++VM+GFV SF++ Y+ E+ + +W A+F+A LG+ ++ + D V +L V YL+++TIM+LNLL+A+LSTAHA ++ A E K ++ R ++HY VV + LP P NL Q + P +V+DLC + DR +AR G FWA L P+A+ +LW +S + W + SL G ++R + +F + P +W G V G R+ + +R + T+ + ++ T V E I++ E G L+ EL L+DPMSDP+VRRDEE R TTV+HIKLLRNRLEAT +H+ + A++ A +LE
Sbjct: 899 LAYLLQQGAKPTNKG---LLRLSNLVKFPRLKESLLGAISSANNPFIPGMNLSVACTTATRRAMEGEKRRLASMQAAVDELLLEVLEHMPQTVKGFKGEMRDCSAIFEPETVISRFHGYQGPLHVVLSKREQMETYCTIPLVLDFMTRKFTKGLPSLRD-----TEGVLLSNKGFTQTLYGGGLLAEGKVFFFGMALQRGYAGGALSSITYFPGARFIIAGFLSRPGSYYKVPALRMCLDLVTYISMMIIFGGFVILHEAGDTSDWLEIVFTMYIFGGILTEFREILEDPWEYMRDQWNLLDVTSLTLLLGGAIQRMY----GQVDDESSRALYALSAPLAFARILFFAQILPSQGPMIQVMFSMTGLLAKFGMIMLLVMLGFVTSFYS---LYK-----ETTAYGEVWKAIFRATLGETDYLDDFSGTTFDGVATVLLVVYLVLLTIMMLNLLVAVLSTAHAKVDANAGLEYKVTRARLIQHYVNVVEIDRLPPPFNLFQWIFALPFMVLDLCFRTSRRPSTASTNSAXXXXXXXXXXXXXXSINGNEKTKRDRSYFKVARGFFGRLAFWAMLGPIAVLAGWVLWMISIVKAPVVVWQTSGDKSLGGRIARMLLVIFVCAVGAPFWHLVMWVRGGVAGVRRTMRALGCXXXXXXXXXXXXKRGDGRTTTASITARGSPATIVAEGAEDDMEKVVPIVLQEADGALTTSELQIFLDDPMSDPDVRRDEETRATTVEHIKLLRNRLEATTKEHMNGLQAYLLKTAGDISRQLE 1650
BLAST of mRNA_H-elongata_contig10909.734.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI) HSP 1 Score: 334 bits (856), Expect = 2.800e-94 Identity = 246/719 (34.21%), Postives = 347/719 (48.26%), Query Frame = 2
Query: 389 LKKCFRQAISAVENPFIPGMMLSLALVIEAPTAKADERRKLTELREMVEELLLEVLERMPQTVLGFPGGAAACSLLFEPENTGTRSESFKGPLKTAFSKHHLITTFCTQPLIVDFISHTFGAGLLNLRS---------RIPSVAAG-----------------------------------------------MLKKVD----PAVVVRDPLAADLQRNRTTL--FPGAQFIFVGIVAMPFTYYRVPLLRMWLDLAVFVIFLAVYTIVVANMYDKSSANAPEIALGFYVIAAIMAEAGAVGRSNREYLRDSWNWLDVPAIFLLSAGFVVRIWTTLSGNDTEQVGEACYLLGAPLLFPRILFFAQIHPSQGALLQ-----------FSIIMIVVMMGFVVSFWASSERYRIVNEDESATFDLMWVAVFKAMLGD---FGDVESLTEEPDWVDRLLFVFYLIVMTIMLLNLLIAILSTAHANIEERAETEIKASKVRTMEHYRRVVVNNVLPAPLNLLQLLALFPILVIDLCIHRGLYDRLKPTIARIMGSFVFWATLSPVAIALSSLLWFVST---PTIIISRWDQNA-------SLWGNVSRSVAAVFESLIAVPLTLFWLWALGVVNGARQIVDLAQGRRLEIPTSVSFLSNMPQVPTTVGEILM-TEGRLSVHELSACLEDPMSDPEVRRDEENRPTTVQHIKLLRNRLEATRADHL 2284
L+ CF + ++ +NPF+PGM LS+A A A ERRKL L+E V+ LLLE+LER+PQTV GF GG CS +FEPE + + GPL+ A + + TFCTQPL+ DF+S F GL LR + ++A G K +D P ++++ A L +L PGAQF G+V MP YYRVP +RM LDLAV++ L ++ VV ++ E A FY++A I+ E + R Y D WN LD+ + L++ G +VR + G A Y L APL+F R+LFFAQ+ G ++Q F +++IVVM+GF +SF A + TF + +FKAMLG+ FG + D V LFV YL+V+ +MLLNLLIA+LST+H+ +E +A+ E K SK R +EHYR VV +LP P NL+QL+ P++V D R +G FW L PVA A ++LW +S+ P + + + A S+ + R + F ++ PL L W + + R + P S+ P +V ++L G L +L LEDP+ DPEVR DE + TTV++IK LRNRLE T HL
Sbjct: 561 LRTCFLETVACSDNPFVPGMTLSIAFAKSASVAPEGERRKLLSLQERVDTLLLEILERLPQTVQGFDGGMTGCSAVFEPELSREDARGLPGPLRLALQERQHVQTFCTQPLLTDFLSRRFTYGLPGLRDTQNILGDRRELTNLARGGPGELMSGQKYLALDEEGRRKEDGRSLDRCLLLDLQDKIGQEGKLLDSRKIIDTLLSPCILLQGANCAGLWNTAVSLTFLPGAQFTIAGLVGMPDQYYRVPAMRMLLDLAVYLGMLVFFSTVVL-FHEDGPLTPGEAAFAFYILAGIITEGQEMRRDFGLYAADHWNILDLLGLGLVTGGLIVRC-----ADGDNSWGRALYALSAPLIFSRLLFFAQMLRFHGPMIQVVFSMTAELVKFGVVIIVVMLGFAMSFHALF--------GDVDTFGGTCLTLFKAMLGEVDFFGSFPG--NQYDSVATALFVIYLVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRMVVDMCLLPPPFNLVQLILSLPVMVRD----RSGQGTASTRAQEAVGRMAFWLALGPVAAACGTVLWVLSSLFAPFVWHTHFYSKAQARRGALSVGSLLVRYLIVFFWCVLGAPLYLMAFWLTAPMKWLKLRPWCWVWDRRQAPYIASWN------PKSVNDLLEGNSGGLVAGDLQMYLEDPIGDPEVRPDERRKQTTVENIKQLRNRLEKTILTHL 1253
BLAST of mRNA_H-elongata_contig10909.734.1 vs. uniprot
Match: D8LT30_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT30_ECTSI) HSP 1 Score: 309 bits (792), Expect = 2.030e-85 Identity = 251/782 (32.10%), Postives = 363/782 (46.42%), Query Frame = 2
Query: 170 ALSTVLSMDQMADISTACLETELDGMDKTSTLRDLLQDFWPGRLSFLLACGAKVTTGADGHVDDISDSLGLVELKKCFRQAISAVENPFIPGMMLSLALVIEAPTAKADERRKLTELREMVEELLLEVLERMPQTVLGFPGGAAACSLLFEPENTGTRSESFKGPLKTAFSKHHLITTFCTQPLIVDFISHTFGAGLLNLRSRIPSVAAGMLKKVDPA-VVVRDPLAAD---------LQRNRT-------TLFPGAQFIFVGIVAMPFTYYRVPLLRMWLDLAVFVIFLAVYTIVVANMYDKSSANAPEIALGFYVIAAIMAEAGAVGRSNREYLRDSWNWLDVPAIFLLSAGFVVRIWTTLSGNDTEQVGEACYLLGAPLLFPRILFFAQIHPSQGALLQ-----------FSIIMIVVMMGFVVSFWASSERYRIVNEDESATFDLMWVAVFKAMLGD---FGDVESLTEEPDWVDRLLFVFYLIVMTIMLLNLLIAILSTAHANIEERAETEIKASKVRTMEHYRRVVVNNVLPAPLNLLQLLALFPILVIDLCIHRGLYDRLKPTIARIMGSFVFWATLSPVAIALSSLLWFVSTPTIIISRWDQNASLWGNVSRSVAAVFESLIAVPLTLFWLWALGVVNGARQIV------------DLAQGRRL--EIPTSVSFLSNMPQVPTTVGE-----------ILMTE--GRLSVHELSACLEDPMSDPEVRRDEENRPTTVQHIKLLRNRLEATRADHLVDIMAHIESAANAREGRLE 2341
A+ LS QM D ++ L T + + ++D L++LL GAK T + + + + LK+ AIS+ +NPFIPGM LS+A + A E+R+L ++ ++ELLLEVLE MPQTV GF G CS +FEPE +R ++GPL SK + T+CT PL++DF+S F GL +LR V +P + D L A+ LQR+ T FPGA+FI G+++ P +YY+VP LRM LDL +++ + ++ V + + EI Y+ I+ E + EY+RD WN LDV ++ LL G + R++ G +Q A Y L APL F RILFF QI PSQG ++Q F +IM++VM+GFV SF++ Y+ E+ T+ ++W A+F+A LG+ F D T D V L V YL+++TIM+LNLL+A+LSTAHA ++ A E KA P++V W T + S G ++R + +F + P +W G V G R+ + +R+ PT+ + P TTV E I++ E G L+ EL L+DPMSDP VRRDEE R TTV+HIKLLRNRLEAT +H+ + A++ A +LE
Sbjct: 614 AMGKFLSAYQMTDALSSSLSTGCNNLSLP------VEDARLSVLAYLLQHGAKPTNKG---LLRLCNLVKFPRLKESLLGAISSADNPFIPGMNLSVACTMATRRAMEGEKRRLASMQAAIDELLLEVLEHMPQTVKGFKGEMRDCSAIFEPETVISRFHGYQGPLHVVLSKRQQMETYCTIPLVLDFMSRKFTKGLPSLRDT-EGVLLNNTSFTEPGQTLYGDGLLAEGRVFFFGMALQRSYAGGTLSSITYFPGARFIIAGLLSRPGSYYKVPALRMCLDLVTYILMMIIFGGFVILHDAGDTFDWMEIVFTMYIFGGILTEFREILDDPWEYMRDQWNLLDVASLTLLLGGVIQRMY----GQVDDQSSRALYALSAPLAFARILFFVQILPSQGPIIQVMFSMTGLLAKFGMIMLLVMLGFVTSFYS---LYK-----ETTTYGVVWKAIFRATLGETDYFDDFSGTTF--DGVATALLVVYLVLLTIMMLNLLVAVLSTAHAKVDADAGLEYKA-------------------------------PVVV--------------------------WQT-------------------------SGDKSRGGRIARMLLVIFACAVGAPFWHLVMWVRGGVAGVRRTMRALGCCXXXXXXXXGGAKRVGGRTPTASMTVRGFPA--TTVAEGAEHDMEKVVPIVLQEADGALATSELQIFLDDPMSDPAVRRDEETRATTVEHIKLLRNRLEATTKEHMDGLQAYLLKTAGDISRQLE 1287
BLAST of mRNA_H-elongata_contig10909.734.1 vs. uniprot
Match: A0A6H5JMG8_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMG8_9PHAE) HSP 1 Score: 288 bits (738), Expect = 4.090e-79 Identity = 230/672 (34.23%), Postives = 330/672 (49.11%), Query Frame = 2
Query: 137 PNRHAVAARVA-------ALSTVLSMDQMADISTACLETELDGMDKTSTLRDLLQDFWPGRLSFLLACGAKVTTGADGHVDDI---SDSLGLVELKKCFRQAISAVENPFIPGMMLSLALVIEAPTAKAD-ERRKLTELREMVEELLLEVLERMPQTVLGFPGGAAACSLLFEPENTGTRSE-SFKGPLKTAFSKHHLITTFCTQPLIVDFISHTFGAGLLNL----------RSRIP-----------------SVAAGMLKKVDPAVVVRDPLAADLQRNRTTLFPGAQFIFVGIVAMPFTYYRVPLLRMWLDLAVFVIFLAVYTIVVANMYDKSSANAPEIALGFYVIAAIMAEAGAVGRSNREYLRDSWNWLDVPAIFLLSAGFVVRIWTTLSGNDTEQVGEACYLLGAPLLFPRILFFAQIHPSQGALLQ-----------FSIIMIVVMMGFVVSFWASSERYRIVNEDESATFDLMWVAVFKAMLGDFGDVESLT-EEPDWVDRLLFVFYLIVMTIMLLNLLIAILSTAHANIEERAETEIKASKVRTMEHYRRVVVNNVLPAPLNLLQLLALFPILVIDLCIHRGLYDRLKPTIARIMGSFVFWATLSPVAIALSSLLWFVSTPTIIISRWDQNA-SLWGNVSRSVAAVFESLIAVPLTLFWLW 1996
PN A+AARV L+ +L +++ E +T LR ++D G LS LL G K H D+ ++ EL +C QA+++ +N FIP + LS A +A ++ +RR L L+ V+ +L E L+R+PQTV G GG AAC+ L EPE S +GPL A H I TF T PL ++F+ F GL L +SR+ S+ G L +V + D LA T FPGA FI G+VA+P +YY+VPL+RM LD VF LA +T V +++K S E+A YV+AAIM EA + + YL D W A+ + A F+ R + + G Y +G+PL++ R+L++AQ+ PSQG+ +Q F ++M VV++GF +SF+A + + + T + F+AMLG+ G + E+ D +L V YL+VMTIMLLNLLIA+LSTAH +EE I+ S+ R HYR VV + LPAP NL QL+ L P ++DL Y P R +G VFW L P AI +W VSTP + + + + S+ V R++ + + VPL L W
Sbjct: 365 PNLIALAARVGDCQLFETILAAMLETSTTYEVARVLAEAFSVATTETQGLRHTIEDPLRG-LSMLLQHGTKP------HPADLVILCRAIDYEELDECLFQAVASAKNSFIPSLNLSFAFRDAIRSAASERDRRVLARLQHDVDSILTETLDRLPQTVCGLSGGMAACTALLEPEEADDSSTYGERGPLARALGCPHRIVTFATTPLCMNFMLLKFTRGLPALNDGHSVLILEKSRLDVREEAKGHESLTALCPGSILGGFLPRVGKLLWEDDRLAP------LTFFPGAHFIATGVVALPNSYYKVPLMRMALDATVFTAALAFFTSRVL-LFEKGSLTIAEMAFAIYVVAAIMLEATEMWKDLAGYLLDRWKAPHFLALVVALAAFLAR-----AIDSDSSWGRGLYAVGSPLMYWRLLYYAQVIPSQGSTIQVLYSMASELGQFFVVMGVVILGFAMSFFA------LFRDVKGETLRGALLDAFQAMLGEVGLFDDFVGEKHDLAATVLLVSYLLVMTIMLLNLLIAVLSTAHGKVEEAVL--IRVSRARVYTHYRWVVATDALPAPFNLAQLVVLLPCQMVDLLFKSNTY----PIARRGVGRIVFWLVLGPGAILGGIFVWLVSTPKALFAICRKRSLSILSRVGRTMLCLLWITLGVPLCLVVSW 1005
BLAST of mRNA_H-elongata_contig10909.734.1 vs. uniprot
Match: D7FR83_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR83_ECTSI) HSP 1 Score: 279 bits (713), Expect = 3.720e-76 Identity = 203/581 (34.94%), Postives = 297/581 (51.12%), Query Frame = 2
Query: 386 ELKKCFRQAISAVENPFIPGMMLSLALVIEAPTAKAD-ERRKLTELREMVEELLLEVLERMPQTVLGFPGGAAACSLLFEPE---NTGTRSESFKGPLKTAFSKHHLITTFCTQPLIVDFISHTFGAGLLNLR----------SRIP-----------------SVAAGMLKKVDPAVVVRDPLAADLQRNRTTLFPGAQFIFVGIVAMPFTYYRVPLLRMWLDLAVFVIFLAVYTIVVANMYDKSSANAPEIALGFYVIAAIMAEAGAVGRSNREYLRDSWNWLDVPAIFLLSAGFVVRIWTTLSGNDTEQVGEACYLLGAPLLFPRILFFAQIHPSQGALLQ-----------FSIIMIVVMMGFVVSFWASSERYRIVNEDESATFDLMWVAVFKAMLGDFGDVESLT-EEPDWVDRLLFVFYLIVMTIMLLNLLIAILSTAHANIEERAETEIKASKVRTMEHYRRVVVNNVLPAPLNLLQLLALFPILVIDLCIHRGLYDRLKPTIARIMGSFVFWATLSPVAIALSSLLWFVSTPTIIISRWDQNA-SLWGNVSRSVAAVFESLIAVPLTLFWLW 1996
EL +C QA+++ +N FIP + LS A +A ++ +RR L L+ V+ +L E L R+PQ+V G GG AAC+ L EPE ++ T E +GPL A H I TF T PL ++F+ F GL L+ SR+ S+ G L +V + D LA T FPGA FI G+VA+P +YY+VPL+RM L+ +F LA +T V +++K E+A YV+AAIM EA + + YL D W A+ + A F+ R + + G Y +G+PL++ R+L++AQ+ PSQG+ +Q F ++M VV++GF +SF+A + + + T + F+AMLG+ G + E+ D +L V YL+VMTIMLLNLLIA+LSTAH +EE I+ S+ R HYR VV + LPAP NL QL+ L P ++D+ Y P R +G VFW L P AI +W VSTP + + W + + S+ + R++ + + VPL L W
Sbjct: 360 ELDECLFQAVASAKNSFIPSLNLSFAFRDAIRSAASERDRRVLARLQHDVDSILTETLNRLPQSVCGLSGGMAACTALLEPEVADDSSTYGE--RGPLARALGCTHRIVTFATTPLCMNFMLLKFTRGLPALKDGHSVLILEKSRLDIREEAKGHESLTALCPGSILGGFLPRVGKLLWDDDRLAP------LTFFPGAHFIATGVVALPNSYYKVPLMRMALEAMIFTAALAFFTSRVL-LFEKGQLTIAEVAFAIYVVAAIMLEATEMWKDLAGYLLDRWKAPHFLALVVALAAFLAR-----AIDPDSSWGRGLYAVGSPLMYWRLLYYAQVIPSQGSTIQVLYGMASELGQFFVVMGVVILGFAMSFFA------LFRDVKGETIRGALLDAFQAMLGEVGLFDDFVGEKHDLAATVLLVSYLVVMTIMLLNLLIAVLSTAHGKVEEAVL--IRVSRARVYTHYRWVVATDALPAPFNLAQLVVLLPCKMVDVLFKGNTY----PIARRGVGRIVFWLLLGPGAILGGVFVWLVSTPKALFAIWGKRSLSIASRLGRTMLCLLWITLGVPLCLVVSW 914
BLAST of mRNA_H-elongata_contig10909.734.1 vs. uniprot
Match: D7FMG5_ECTSI (Transient receptor potential channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMG5_ECTSI) HSP 1 Score: 277 bits (709), Expect = 1.670e-75 Identity = 210/664 (31.63%), Postives = 309/664 (46.54%), Query Frame = 2
Query: 362 ISDSLGLVELKKCFRQAISAVENPFIPGMMLSLALVIEAPTAKADERRKLTELREMVEELLLEVLERMPQTVLGFPGGAAACSLLFEPENTGT-RSESFKGPLKTAFSKHHLITTFCTQPLIVDFISHTFGAGLLNLRSRIPSVAAGMLKKVDPAVVVRDPLAADL-----------------------------------------------QRNRT--------------------------------------------------TLFPGAQFIFVGIVAMPFTYYRVPLLRMWLDLAVFVIFLAVYTIVVANMYDKSSANAPEIALGFYVIAAIMAEAGAVGRSNREYLRDSWNWLDVPAIFLLSAGFVVRIWTTLSGNDTEQVGEACYLLGAPLLFPRILFFAQIHPSQGA-----------LLQFSIIMIVVMMGFVVSFWASSERYRIVNEDESATFDLMWVAVFKAMLGDFGDVESLTEEPDWVD--RLLFVFYLIVMTIMLLNLLIAILSTAHANIEERAETEIKASKVRTMEHYRRVVVNNVLPAPLNLLQLLALFPILVIDLCIHRGLYDRL-KPTIARIMGSF---VFWATLSPVAIALSSLLWFVSTPTIIISRWDQ----NASLWGNVSRSVAAVFESLIAVPLTLFWLW 1996
+++ L L E+K CF +S V+NPFIPG+ LS+AL A E R L L++ +++LL VL+R+PQT+ FPGG C + EPE G R F+GPL+ A + T C PL+ ++ + F AGL +L+ + K+ + P+ A + +R R T PGAQF+ VGI+ P YY+VP++RM L V +I LA+YT V D +N EIAL F+V+A I++ + E+ RD WNWL+ ++ LL+ G +RI +D Q G A + L APL+F R+LFF Q QG +LQF++++ +MMGF VSF+A E E+ ++ +W+ VFKAMLG+ + E+ + D R+L V YL V+ +MLLNLLIA+LST HA ++E+ + + SKVR M+ Y R+V ++VLP+P NL P + + L + RG+ L T +IM F VFW TL AI ++ LW S P +++ W + SL V+ S V + A+P L W W
Sbjct: 201 LAEILKLEEMKDCFLGGLSFVDNPFIPGLSLSVALEESLKNAPERESRCLEALQKAMDDLLRAVLDRLPQTIASFPGGVGGCESVLEPEVAGVLRDRDFRGPLRLALQERQFSKTLCIAPLMFKYMCYRFVAGLPDLQDSNDLLGGREEKRTRTSFETSGPVRAPVASAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSGTRRGRKGRDFLYSDGFVAGSATERLLQGLGWTGRRAAAALTPPPERPSDWETIFSGTFLPGAQFVLVGILTKPLAYYKVPVMRMLLGFYVHLITLALYTAVALESDDGELSNT-EIALTFHVMAEIVSNLLQMRAGFVEFWRDKWNWLESLSLLLLAGGLTIRI----RNSDVHQ-GRALFALSAPLVFSRVLFFGQFLKRQGLVIQMMTILFGEMLQFALVLGTIMMGFTVSFYALFE--------EAKSYGDVWLDVFKAMLGEVSVFSEIYEDSVYRDVARVLLVVYLTVVAVMLLNLLIAVLSTEHAKVDEQQDIAFRESKVRIMKLYVRIVDSDVLPSPFNL-------PQIAVGL-VARGVDGLLGTKTCPKIMREFSVGVFWLTLGSPAILIAWGLWAASAPMAVLTAWRRATYTGRSLTVAVACSSVVVVLHVFALPFVLSWFW 842
BLAST of mRNA_H-elongata_contig10909.734.1 vs. uniprot
Match: A0A6H5KBU4_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU4_9PHAE) HSP 1 Score: 263 bits (672), Expect = 1.350e-69 Identity = 249/764 (32.59%), Postives = 345/764 (45.16%), Query Frame = 2
Query: 392 KKCFRQAISAVENPFIPGMMLSLALVIEAPTAKADERRKLTELREMVEELLLEVLERMPQTVLGFP--GGAAACSLLFEPE--NTGTRSESFKGPLKTAFSKHHLITTFCTQPLIVDFISHTFGAGLLNLRSRIPSVAAGMLKK------VDPAVVVRDP------------LAADLQRNRT---------TLFPGAQFIFVGIVAMPFTYYRVPLLRMWLDLAVFVIFLAVYT-IVVANMYDKSSAN-----APEIALGFYVIAAIMAEAGA------VGRSNREYLRDSWNWLDVPAIFLLSAGFVVRIWTTLSGNDTEQVGEACYLLGAPLLFPRILFFAQIHPSQG-----------ALLQFSIIMIVVMMGFVVSFWASSERYRIVNEDESATFDLMWVAVFKAMLGDFGDVESLTE-EPDWVDRLLFVFYLIVMTIMLLNLLIAILSTAHANIEERAETEIKASKVRTMEHYRRVVVNNVLPAPLNLLQLLALFPILVIDLCIH------RGLYDRLKP----------------------TIARIMGSFVFWATLSPVAIALSSLLWFVSTPTII-------ISRWDQNASLWG-----------------------------NVSRSVAAVFESL---IAVPLTLFWLWALGVVNGARQIV----------------DLAQGRRLEIPTSVSFLSNMPQVPTTVGEILMTEG--RLSVHELSACLEDPMSDPEVRRDEENRPTTVQHIKLLRNRLE 2263
K+C +A+++ NPF+PG+ LS+ L A A ERR L + + ++ELLLE+ ER+PQTV GF G +C+ + EPE T S GPL S + TFC PLI+DF+S F GL +L AG+LK ++ + RD LAA L+ R T PG QFI +VA P YY VP +RM LD V+V +AV + V+ + +S + A ++L A I AGA + R R Y +D WN LD I L G V+R W + T G A Y L APL+ R+LFFAQI G LLQF +M+VVM+GF + A +R + A F + +FKAMLG+ G + + D V +L V YL ++T+MLLNLLIAILST HA + E K SK R + HYR VV N+VLPAP NL+QL+ ++V+ L + R + +P + R G FV+W L VA+A ++LW +S +S D+ S +G + + V VF S+ I V L F ++ L ++ +V LA R + P PT E ++ +G L LEDPM+D +VR+DE+ R TTV+HIKLLR+RLE
Sbjct: 540 KRCCLRAVTSAANPFVPGVTLSIRLSEAAKQASEGERRALFDTKSSIDELLLEMFERLPQTVRGFEEQAGMDSCTNVLEPELMRATTGSNDLGGPLDMIISDPLQLETFCKVPLIMDFLSSKFTLGLPDLMD-----TAGLLKNEHHLWYLEEDGLFRDEHGFGSDGIPVALLAALLKGVRQGIWDNTPILTFLPGTQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAVLSSFVLFHSTTESDSGLDGIVAHRLSLSEGACALIFITAGAYREGREMKRGIRAYFKDQWNVLDALGILFLFVGLVIR-WD----DWTSTWGPAFYALSAPLVVARVLFFAQILQFHGPMVQVIFRMTATLLQFGAVMLVVMIGFTM---ALHVFFR-----DVADFGDTLLGLFKAMLGETGIFDEFSGGRYDPVATILVVVYLCIVTVMLLNLLIAILSTEHAQVMENTAEAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLILSLGVIVLTLPYYFLLEAKREHSETERPATDEDGRLFWGNVWEGARHRHRSARRAFGQFVWWLVLGSVAVAGGAMLWSLSGLFYAQYACHSWLSTTDEQNSFFGFLQEGDEEPDEEDTAKDVVVFGSCGSPLWRMLQGVRIVFRSVLQWIGVVLAWFLIFLLCILGAPCCLVLRWLILPGTEFFSWCWKLAACRSTQDPGEDKKSPMRSSTPTI--ESMLKKGCCGAGAENLLEFLEDPMNDKDVRQDEKERKTTVEHIKLLRDRLE 1283
BLAST of mRNA_H-elongata_contig10909.734.1 vs. uniprot
Match: D7FZR6_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR6_ECTSI) HSP 1 Score: 261 bits (666), Expect = 5.540e-69 Identity = 248/768 (32.29%), Postives = 344/768 (44.79%), Query Frame = 2
Query: 392 KKCFRQAISAVENPFIPGMMLSLALVIEAPTAKADERRKLTELREMVEELLLEVLERMPQTVLGFP--GGAAACSLLFEPENTGTRSES--FKGPLKTAFSKHHLITTFCTQPLIVDFISHTFGAGLLNLRSRIPSVAAGMLKK------VDPAVVVRDP------------LAADLQRNRT---------TLFPGAQFIFVGIVAMPFTYYRVPLLRMWLDLAVFVIFLAVYTIVVANMYDKSSANAPEI--------ALGFYVIAAIMAEAGA------VGRSNREYLRDSWNWLDVPAIFLLSAGFVVRIWTTLSGNDTEQVGEACYLLGAPLLFPRILFFAQIHPSQG-----------ALLQFSIIMIVVMMGFVVSFWASSERYRIVNEDESATFDLMWVAVFKAMLGDFGDVESLTE-EPDWVDRLLFVFYLIVMTIMLLNLLIAILSTAHANIEERAETEIKASKVRTMEHYRRVVVNNVLPAPLNLLQLLALFPILVID------LCIHRGLYDRLKPTI----------------------ARIMGSFVFWATLSPVAIALSSLLWFVSTPTIIISRW-------DQNASLWG------------NVSRSVAA-----------------VFESLI------------------AVPLTLFWLWALGVVNGARQIV---DLAQGRRLEIPTSVSFLSNMPQVPTTVGEILMTEGRLSV--HELSACLEDPMSDPEVRRDEENRPTTVQHIKLLRNRLE 2263
K+C +A+++ NPFIPG+ LS+ L A A ERR L E + ++E+LLE+ ER+PQTV GF G +C+ + EPE +S S GPL S + TFC PLI+DF+S F GL +L AG+LK ++ + RD L A L+ R T PGAQFI +VA P YY VP +RM LD V+V +A + V ++ ++ + P + +L A I AGA + R R Y +D WN LD + L G V+R W + T G A Y L APL+ R+LFFAQI QG LLQF +M+VVM+GF ++ ++ D D + + +FKAMLG+ G + + D V +L V YL ++T+MLLNLLIAILST HA ++E K SK R + HYR VV N+VLPAP NL+QLL ++ + L R + +P I R G V+W L PVA+A ++LW +S W D+ +G ++S+ V VF L+ P LF W V+ G LA R + P PT E ++ +GR V +L LEDPM+D +VR+DE+ + TTV+HIKLLR+RLE
Sbjct: 523 KRCCLRAVTSAANPFIPGVTLSIRLTEAAKQASEGERRALFETKSSIDEMLLEMFERLPQTVRGFEEQAGTDSCTNVLEPELMRAQSGSNDLGGPLDMIISDPLQLETFCKVPLIMDFLSSKFTLGLPDLMD-----TAGLLKNEHQLWYLEEDGLFRDEHGLGLDGIPVALLEALLKGVRQGIWDNTPTLTFLPGAQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAALSYFV--LFHSTTGSDPGLDGIADHRFSLSEGACALIFITAGAYREGREMKRGIRAYFKDQWNVLDALGMLFLFVGLVIR-WD----DWTSTWGPAFYALSAPLVVARVLFFAQILQFQGPMVQVIFRMTATLLQFGAVMLVVMIGFTMAL-------HVIFRDVEDFGDTL-LGLFKAMLGETGFFDEFSGGRYDPVATILVVVYLFIVTVMLLNLLIAILSTEHAQVQENTGGAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLLLSLGVIAMTFPYCFLLEAKREQSETERPAIDEHGRLFWGNVWEGARQRHRGARRAFGQLVWWLVLGPVAVAGGAILWGLSGFFYAQYAWHSWLSTTDEQDCFFGFLLESDEEPDAEDMSKEVVMFGSCGSPLWRMLQGLGIVFRFLLEWIGVVLAWFLTFLLCILGAPCCLFLRWL--VLPGTEFFSWCWKLAACRSTQDPDEDEESPKRLSTPTI--ESMLKKGRSGVGAEKLLEFLEDPMNDKDVRQDEKEKKTTVEHIKLLRDRLE 1266
BLAST of mRNA_H-elongata_contig10909.734.1 vs. uniprot
Match: A0A6H5JG42_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG42_9PHAE) HSP 1 Score: 223 bits (567), Expect = 9.490e-57 Identity = 183/521 (35.12%), Postives = 261/521 (50.10%), Query Frame = 2
Query: 872 TLFPGAQFIFVGIVAMPFTYYRVPLLRMWLDLAVFV-IFLAVYTIVVANMYDKSSA--------------NAPEIALGFYVIAAIM-AEAGAVGRSNREYLRDSWNWLDVPAIFLLSAGFVVRIWTTLSGNDTEQVGEACYLLGAPLLFPRILFFAQIHPSQG---------ALLQFSIIMIVVMMGFVVSFWASSERYRIVNEDESATFDLMWVAVFKAMLGDFGDVESLTEEP-DWVDRLLFVFYLIVMTIMLLNLLIAILSTAHANIEERAETEIKASKVRTMEHYRRVVVNNVLPAPLNLLQLLALFPIL--VIDLC-------------IHRG--LYDRLKPTIARIMGSFVFWATLSPVAIALSSLLWFVSTPTIIISRWDQNASLWGNVSRSVAAVFESLIAVPLTLFWLWALGVVNGARQ---IVDLAQGRRL----EIPTSVSFLSNMPQVPTTVGEILMTEGRLSVHELSACLEDPMSDPEVRRDEENRPTTVQHIKLLRNRLEATRADHL 2284
T FP AQFI G+ A Y+RVP++RM LDL V++ + +A+ T V+ + S N E VIA M E + R+ YL D WN LD+ + + GF+ R+ + T+Q+G A Y L APLL R LFF QIHP QG LL+F +M VVM+GF ++F + +F ++ +FKAM G+ + + + D V +L V YL ++TI+LLNLL+AILST+H+ +++ + E KAS R M+HY+ VV N++LPAP NLLQL+ +PI V C ++RG Y+R I G VFW L PVA+ +LLW VSTP + LW R SLI++ F++ L + GA ++ L RRL S++ + T +L G + +L L+DPM D +VR+DE ++ TTV+H+KLLRNRLE T D L
Sbjct: 528 TPFPAAQFIVAGLAARSNDYFRVPVMRMVLDLVVYLGVLVALSTFVLFRSQAEQSRVDGSADEEIVFRKLNWSEATCATAVIAGGMYREWFEMARNYGRYLEDQWNALDLLGLLFFTIGFIARV-----VDWTQQLGPAFYALSAPLLVSRALFFVQIHPLQGPMVIFRMTTVLLKFGFVMAVVMIGFTMAFHVLFRDFD--------SFGESFLELFKAMFGETTFFNAFSGDTYDAVATMLLVVYLSIVTILLLNLLVAILSTSHSKVQKNIDREFKASIARMMDHYQLVVTNDILPAPFNLLQLVV-WPIAWCVGGCCGRSTSGSQSTRQELNRGREAYERGNKAI----GPVVFWVVLGPVAVVGGTLLWIVSTPLSVY--------LWRKHHREGDRKRLSLISLGCRYFFIIPLWCILGAPVYLFVLWLGASRRLLCRCNYDVSIAHAESGHFRCTIESILLEGPGGVGAKKLREFLDDPMDDKDVRQDERDKRTTVEHVKLLRNRLENTIQDEL 1022
BLAST of mRNA_H-elongata_contig10909.734.1 vs. uniprot
Match: A0A6H5KJG3_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJG3_9PHAE) HSP 1 Score: 212 bits (540), Expect = 4.690e-53 Identity = 176/543 (32.41%), Postives = 258/543 (47.51%), Query Frame = 2
Query: 872 TLFPGAQFIFVGIVAMPFTYYRVPLLRMWLDLAVFV-IFLAVYTIVVANMYDKSS--------------ANAPEIALG-FYVIAAIMAEAGAVGRSNREYLRDSWNWLDVPAIFLLSAGFVVRIWTTLSGNDTEQVGEACYLLGAPLLFPRILFFAQIHPSQGALLQ----------------------FSIIMIVVMMGFVVSFWASSERYRIVNEDESATFDLMWVAVFKAMLGDFGDVESLTEEP-DWVDRLLFVFYLIVMTIMLLNLLIAILSTAHANIEERAETEIKASKVRTMEHYRRVVVNNVLPAPLNLLQLLALFPILVIDLCIH-------------RGLYDRLKPTIA---RIMGSFVFWATLSPVAIALSSLLWFVST-PTIIISR-------------WDQNAS--LWGNVSRSVAAV-FESLIAVPLTLFWLWALGVVNGARQIVDLAQGRRLEIPTSVSFLSNMPQVPTTVGEILMTEGRLSVHELSACLEDPMSDPEVRRDEENRPTTVQHIKLLRNRLEATRADHL 2284
T FPGAQ I G+ A P Y+RVP +RM LDL V++ + +A+ T V+ + + S + PE +++ + E + R+ Y D WN LD+ ++ L+ G V R+ + Q+G A Y L APLL R LFF QIHP QG ++Q F +M V+++GF ++F + +F ++ +FKAMLGD + + + D V L V YL ++T+MLLNLL+AILST+HA + E E E K S R M+HY+ VV N++LP P NLLQL+ +PI C+H + +R K A + +G VFW L PVA+ SLLW S P + R D S LW R V + + P+ L LW +N +R+++ + S + + T +L + G + +L L+DPM D +VR+DE++R TTV+HIKLLRNRLE T + L
Sbjct: 707 TPFPGAQVIVAGLAARPNDYFRVPAMRMVLDLVVYIGMIVALSTFVLFHSQAEKSYVEGSTDEQVVFRTLDWPEATCAKIFIVGGVFQEGREMARNFGRYCEDQWNALDLLSLLFLTIGLVGRV-----VDWKSQLGPAFYALAAPLLVSRALFFVQIHPLQGPMIQASGETKRFPQRVVFRMTRILLKFGFVMAVIVLGFTMAFHVLFRDFD--------SFGESFLDLFKAMLGDTDFFKVFSGDTYDVVATFLLVVYLFIVTVMLLNLLVAILSTSHAQVAENIEREFKVSIARMMDHYQLVVTNDMLPTPFNLLQLIV-WPI---AWCLHGCCGRNSGVSGNTQQTRNRSKEAYACGSKAIGPVVFWVVLGPVAVIGGSLLWMGSVLPAMYFWRKHHRLQNKRDNGGGDSKRSMHLWSLFLRYVVIIPCWCVFGAPVYLLLLW----LNASRRVLSRCPCN--DDTRSTAKSRHGASKSTIESMLLKSPGGVGAQKLREFLDDPMDDKDVRQDEKDRRTTVEHIKLLRNRLENTSKEQL 1226 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10909.734.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10909.734.1 >prot_H-elongata_contig10909.734.1 ID=prot_H-elongata_contig10909.734.1|Name=mRNA_H-elongata_contig10909.734.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=800bp MDEDQAIIMLRDSTFDGSSDADLCSCFTPNRHAVAARVAALSTVLSMDQMback to top mRNA from alignment at H-elongata_contig10909:3338..7206+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10909.734.1 ID=mRNA_H-elongata_contig10909.734.1|Name=mRNA_H-elongata_contig10909.734.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3869bp|location=Sequence derived from alignment at H-elongata_contig10909:3338..7206+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10909:3338..7206+ >mRNA_H-elongata_contig10909.734.1 ID=mRNA_H-elongata_contig10909.734.1|Name=mRNA_H-elongata_contig10909.734.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4800bp|location=Sequence derived from alignment at H-elongata_contig10909:3338..7206+ (Himanthalia elongata Himel1 dioecious)back to top |