prot_H-elongata_contig109083.731.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig109083.731.1
Unique Nameprot_H-elongata_contig109083.731.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length81
Homology
BLAST of mRNA_H-elongata_contig109083.731.1 vs. uniprot
Match: A0A6H5L3G6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3G6_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 8.590e-29
Identity = 54/88 (61.36%), Postives = 65/88 (73.86%), Query Frame = 0
Query:    4 QVFTWGHGNTGALGHGDNEDQPQPRLVQPFGHQSSREV----------DPNLLASSVSCGAWHTVVLTVSGKVFAFGDGFTGQLGLED 81
            +VFTWGHG+TGALGHG  ED+P PR+V  FG    R            D ++LA+SV+CGAWHT+VLT +GKV+AFGDGFTGQLGLED
Sbjct:   64 KVFTWGHGSTGALGHGVAEDEPTPRMVSGFGRDVDRSATQGTDEQDGPDADVLATSVACGAWHTLVLTKAGKVYAFGDGFTGQLGLED 151          
BLAST of mRNA_H-elongata_contig109083.731.1 vs. uniprot
Match: D8LS90_ECTSI (eIF3_p135 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS90_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 3.230e-27
Identity = 54/88 (61.36%), Postives = 65/88 (73.86%), Query Frame = 0
Query:    4 QVFTWGHGNTGALGHGDNEDQPQPRLVQPFGHQSSREV----------DPNLLASSVSCGAWHTVVLTVSGKVFAFGDGFTGQLGLED 81
            +VFTWGHG+TGALGHG  ED+P PR+V  FG   +R            D ++LA+SV+CGAWHT+VLT +GKV AFGDGFTGQLGLED
Sbjct: 1779 KVFTWGHGSTGALGHGVAEDEPTPRMVSGFGRDEARSAPQGAGEQDDPDADILATSVACGAWHTLVLTKAGKVHAFGDGFTGQLGLED 1866          
BLAST of mRNA_H-elongata_contig109083.731.1 vs. uniprot
Match: A0A0P1B3E4_PLAHL (Regulator of chromosome condensation-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B3E4_PLAHL)

HSP 1 Score: 69.7 bits (169), Expect = 4.510e-12
Identity = 37/80 (46.25%), Postives = 44/80 (55.00%), Query Frame = 0
Query:    2 CTQVFTWGHGNTGALGHGDNEDQPQPRLVQPFGHQSSREVDPNLLASSVSCGAWHTVVLTVSGKVFAFGDGFTGQLGLED 81
            C +++TWG G  G LGHGD  D+  PR V     Q+           S SCG  HTVVLT  G VF+FG G  G+LGL D
Sbjct:  515 CGELYTWGSGEDGRLGHGDMRDRTVPRKVMTLLRQN---------VVSASCGGAHTVVLTEKGSVFSFGRGRNGRLGLGD 585          
BLAST of mRNA_H-elongata_contig109083.731.1 vs. uniprot
Match: K3WC09_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WC09_GLOUD)

HSP 1 Score: 68.9 bits (167), Expect = 7.190e-12
Identity = 33/79 (41.77%), Postives = 54/79 (68.35%), Query Frame = 0
Query:    4 QVFTWGHGNTGALGHGDNEDQPQP-RLVQPFGHQSSREVDPNLLASSVSCGAWHTVVLTVSGKVFAFGDGFTGQLGLED 81
            +VFTWG GN+GALG+G  E++  P ++V P+  +  R+       +S++CG++HT+V T +GK++ +GD   GQLG E+
Sbjct:  246 EVFTWGFGNSGALGNGTRENRLLPDKIVGPWAAEQDRD-GKAAAVTSIACGSYHTLVSTSTGKLYGWGDSAAGQLGAEN 323          
BLAST of mRNA_H-elongata_contig109083.731.1 vs. uniprot
Match: H3C3U0_TETNG (HECT domain-containing protein n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=H3C3U0_TETNG)

HSP 1 Score: 67.4 bits (163), Expect = 2.920e-11
Identity = 35/78 (44.87%), Postives = 47/78 (60.26%), Query Frame = 0
Query:    1 MCTQVFTWGHGNTGALGHGDNEDQPQPRLVQPFGHQSSREVDPNLLASSVSCGAWHTVVLTVSGKVFAFGDGFTGQLG 78
            M  +VFT+G G  G LGHG   D+ +PRLV+  G            AS +SCG++HT+VL  SG ++AFG G  GQ+G
Sbjct:  255 MNGEVFTFGEGCHGQLGHGSTADELRPRLVESVGRH----------ASQISCGSYHTLVLGSSGHIWAFGSGNKGQIG 322          
BLAST of mRNA_H-elongata_contig109083.731.1 vs. uniprot
Match: H3C0L9_TETNG (HECT domain-containing protein n=2 Tax=Tetraodon nigroviridis TaxID=99883 RepID=H3C0L9_TETNG)

HSP 1 Score: 67.4 bits (163), Expect = 2.920e-11
Identity = 35/78 (44.87%), Postives = 47/78 (60.26%), Query Frame = 0
Query:    1 MCTQVFTWGHGNTGALGHGDNEDQPQPRLVQPFGHQSSREVDPNLLASSVSCGAWHTVVLTVSGKVFAFGDGFTGQLG 78
            M  +VFT+G G  G LGHG   D+ +PRLV+  G            AS +SCG++HT+VL  SG ++AFG G  GQ+G
Sbjct:  253 MNGEVFTFGEGCHGQLGHGSTADELRPRLVESVGRH----------ASQISCGSYHTLVLGSSGHIWAFGSGNKGQIG 320          
BLAST of mRNA_H-elongata_contig109083.731.1 vs. uniprot
Match: A0A2P4XMA0_9STRA (Regulator of chromosome condensation (RCC1)-like protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XMA0_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 4.020e-11
Identity = 34/83 (40.96%), Postives = 54/83 (65.06%), Query Frame = 0
Query:    5 VFTWGHGNTGALGHGDNEDQPQPRLVQ-PFGHQSSREVDPNLLAS------SVSCGAWHTVVLTVSGKVFAFGDGFTGQLGLE 80
            VFTWG G++GALGHG+ ++  +P+L++ P+   S+ E D   L S      S++CG++HT+  T  G ++ +GD   GQLG+E
Sbjct:  816 VFTWGFGSSGALGHGNQDNCLEPKLLEGPWTKGSNLEFDGEHLTSEASIVTSIACGSYHTLASTSDGVLYGWGDAAAGQLGVE 898          
BLAST of mRNA_H-elongata_contig109083.731.1 vs. uniprot
Match: A0A662XMD5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XMD5_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 7.520e-11
Identity = 31/78 (39.74%), Postives = 52/78 (66.67%), Query Frame = 0
Query:    5 VFTWGHGNTGALGHGDNEDQPQP-RLVQPFGHQSSREVDPNL-LASSVSCGAWHTVVLTVSGKVFAFGDGFTGQLGLE 80
            VFTWG G++GALGHGD +++  P RL  P+  Q   +++ +  + ++V+CG++HT+     G ++ +GD   GQLG+E
Sbjct: 1376 VFTWGFGSSGALGHGDRDNRLVPQRLAGPWTRQQGEDLEIDAAVVTAVACGSYHTLACLSDGVLYGWGDAAAGQLGIE 1453          
BLAST of mRNA_H-elongata_contig109083.731.1 vs. uniprot
Match: H3GZM4_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GZM4_PHYRM)

HSP 1 Score: 66.2 bits (160), Expect = 7.550e-11
Identity = 34/83 (40.96%), Postives = 52/83 (62.65%), Query Frame = 0
Query:    5 VFTWGHGNTGALGHGDNEDQPQPRLVQ-PFGHQSSREVDPNLLAS------SVSCGAWHTVVLTVSGKVFAFGDGFTGQLGLE 80
            VFTWG G++GALGHG+ ++  +PRL++ P+      E D   L+S      S++CG +HT+  T  G ++ +GD   GQLG+E
Sbjct: 1482 VFTWGFGSSGALGHGNRDNCLEPRLLEGPWTSSVDVEFDGENLSSESPVVTSIACGGYHTLAATSGGVLYGWGDAAAGQLGVE 1564          
BLAST of mRNA_H-elongata_contig109083.731.1 vs. uniprot
Match: A0A8C6U8S7_9GOBI (Uncharacterized protein n=1 Tax=Neogobius melanostomus TaxID=47308 RepID=A0A8C6U8S7_9GOBI)

HSP 1 Score: 65.1 bits (157), Expect = 1.020e-10
Identity = 33/77 (42.86%), Postives = 48/77 (62.34%), Query Frame = 0
Query:    2 CTQVFTWGHGNTGALGHGDNEDQPQPRLVQPFGHQSSREVDPNLLASSVSCGAWHTVVLTVSGKVFAFGDGFTGQLG 78
            C QV+T+G G+ G LGH    ++ +PRLV+            + LAS ++CG  HT+VL+ SG+ +AFGDG  GQ+G
Sbjct:  173 CGQVWTFGDGSHGQLGHNSTANELKPRLVEGL----------DGLASQIACGRRHTLVLSASGRCWAFGDGVKGQMG 239          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109083.731.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L3G6_9PHAE8.590e-2961.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS90_ECTSI3.230e-2761.36eIF3_p135 domain-containing protein n=1 Tax=Ectoca... [more]
A0A0P1B3E4_PLAHL4.510e-1246.25Regulator of chromosome condensation-like protein ... [more]
K3WC09_GLOUD7.190e-1241.77Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
H3C3U0_TETNG2.920e-1144.87HECT domain-containing protein n=1 Tax=Tetraodon n... [more]
H3C0L9_TETNG2.920e-1144.87HECT domain-containing protein n=2 Tax=Tetraodon n... [more]
A0A2P4XMA0_9STRA4.020e-1140.96Regulator of chromosome condensation (RCC1)-like p... [more]
A0A662XMD5_9STRA7.520e-1139.74Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
H3GZM4_PHYRM7.550e-1140.96Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A8C6U8S7_9GOBI1.020e-1042.86Uncharacterized protein n=1 Tax=Neogobius melanost... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 2..81
e-value: 1.9E-21
score: 78.3
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 4..80
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 4..60
e-value: 2.5E-12
score: 47.2
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 50..60
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 3..63
score: 13.921
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 64..81
score: 8.635
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 3..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig109083contigH-elongata_contig109083:1546..1851 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig109083.731.1mRNA_H-elongata_contig109083.731.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig109083 1546..1851 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig109083.731.1 ID=prot_H-elongata_contig109083.731.1|Name=mRNA_H-elongata_contig109083.731.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=81bp
MCTQVFTWGHGNTGALGHGDNEDQPQPRLVQPFGHQSSREVDPNLLASSV
SCGAWHTVVLTVSGKVFAFGDGFTGQLGLED
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009091RCC1/BLIP-II
IPR000408Reg_chr_condens