mRNA_H-elongata_contig10893.725.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig10893.725.1 vs. uniprot
Match: D8LU24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU24_ECTSI) HSP 1 Score: 243 bits (619), Expect = 2.960e-66 Identity = 152/428 (35.51%), Postives = 226/428 (52.80%), Query Frame = 1
Query: 1 RYGMSASPATGLVGMKENGFLSDYFRGFGFLPLTSESQIRETIVRIMNRTSDTKSRRE----------------------RGNEMASGPSRCTFWSTVALGALVKGTPIESVERYFSLAKNSLEHFSGPATVEAIGAYTILAYVHGFFGDKVGFGRCLQQADAFLQAFVDKAPKDALPAGLEEAIQTGE--HIIRGDEAQAVVD-LCMEDISPPQMSMFPTEGEVYRYLDLAQRAIKQAYFKVAAAQNPMFSSEGDDSEREAAERTGNANSNSKETKASERLVNLNDVMKT-FEETSFKLQTLEQLADRPSIGGGVGGFIINTLLSFASAGKNNFGGTLEKVKNSIKILDRYPGFVR-FFPWSHDAHYFVALLKLSDDPEARSLYDMVRAVFNAVRPPGFQAIPPFNEWRGLSSFCNESCCREAEEIL 1203
R+ +SASPATGLVGM+EN FLSD+F GFLPLT+ S IR +VR+M T T R GN++++GPS CTFW V +GALVKG+P+ESV Y LA+++L+ ++GP E A+ IL Y +GF GD F L AD+FL +++ + LPAG E I+ + + G A +D L PPQ++ EG+++RY + A ++ F+ A ++ + DD E G+ + A+ + +++D M ++ + L++ DR +I G+GG +IN L+F AGK + GG LE++ + ++ +RYPG R W H +H + L AR LY+ +R V+N RP F PP EW G SSFC++ CR E I+
Sbjct: 25 RFRLSASPATGLVGMQENTFLSDFFGCVGFLPLTTPSHIRGEMVRMM--TLSTAPHRPDASYDSLDQGQFGAIFSEDGITTGNQLSAGPSACTFWCAVGVGALVKGSPVESVANYSRLARDALDAYTGPVNAEVAMAWAILGYFYGFMGDTATFQEYLGLADSFLTDSIERGSTNILPAGFAEIIRLEQTVKVYTGHLDAAYIDFLGSRRGDPPQVNPAANEGDLFRYFSQSLNAFEELVFEKACEKSSIRRHLSDDEPWEEDRGGGSPHG------AAPQAEDVSDAMVMGLQDGLIDFEHLQETVDRSNIRKGIGGLLINMYLAFQKAGKGDAGGALERLGHCVEAFERYPGVCRCMMLWCHASHSILGALAAIKSSRARELYNRLRDVYNPSRPASFLPAPPLEEWHGTSSFCDDFQCRCFEGII 444
BLAST of mRNA_H-elongata_contig10893.725.1 vs. uniprot
Match: D8LCW5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW5_ECTSI) HSP 1 Score: 238 bits (606), Expect = 3.590e-65 Identity = 149/415 (35.90%), Postives = 217/415 (52.29%), Query Frame = 1
Query: 43 MKENGFLSDYFRGFGFLPLTSESQIRETIVRIMNRTSDTK------------------------SRRERGNEMASGPSRCTFWSTVALGALVKGTPIESVERYFSLAKNSLEHF-SGPATVEAIGAYTILAYVHGFFGDKVGFGRCLQQADAFLQAFVDKAPKDALPAGLEEAIQTGEHIIRG-DEAQAVVDLCMEDISPPQMSMFPTEGEVYRYLDLAQRAIKQAYFKVAAAQNPMFSSEGDDSEREAAERTGNANSNSKETKASERLVNLNDVMKTFEETS--FKLQTLEQLADRPSIGGGVGGFIINTLLSFASAGKNNFGGTLEKVKNSIKILDRYPGFVRFFPWSHDAHYFVALLKLSDDPEARSLYDMVRAVFNAVRPPGFQAIPPFNEWRGLSSFCNESCCREAEEIL 1203
M+EN FLSD+F GFLPL + S IRET+V+IM + ++ S+ GN + PS CTFW VALGAL KG+PIESV Y LA+ +L + S PA E A+ ILA +HGF GD GF + L +D+F+ + +++ DALP G E ++ E E E+ PPQ+S+ TE E+Y+Y+ + RA ++A + A Q+ GD + E+ R + ++ A + L++ M E + LE+ DRPSI GG+G +IN +L F A K + TLE++ I++L+RYPG R H H + L + D AR++YD VR FN+ RP G+ +PPF EW G+ +FC+ CCR E ++
Sbjct: 1 MQENAFLSDFFGCNGFLPLATPSHIRETMVKIMLPPASSQQPVLGDDCDEGGHYFEAVARGGDLSKTSAGNRLPMDPSACTFWCAVALGALAKGSPIESVTSYARLAQAALANSNSDPADTEVAKAWVILANLHGFMGDMEGFEKYLALSDSFVTSSIEEGSTDALPVGFAEIVKFKEFANASCGEWPLECFSVQENNPPPQLSVVATEAELYQYVAQSCRAFERAVYTTATEQSARG---GDMCDSESHGRPDGVRPSPQDFMAGD----LSNAMGVLLENGSCIHFEPLEEAVDRPSIRGGIGALLINGILVFEKAAKGDLRATLERIGRCIEVLERYPGLCRCMIGCHMTHMMLICLVAAGDSSARAMYDRVRGAFNSHRPSGYLPVPPFEEWCGVDAFCDHRCCRAIEGLV 408
BLAST of mRNA_H-elongata_contig10893.725.1 vs. uniprot
Match: A0A6H5JBJ1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ1_9PHAE) HSP 1 Score: 239 bits (609), Expect = 2.260e-64 Identity = 148/426 (34.74%), Postives = 224/426 (52.58%), Query Frame = 1
Query: 1 RYGMSASPATGLVGMKENGFLSDYFRGFGFLPLTSESQIRETIVRIMNRTSD--------------------TKSRRERGNEMASGPSRCTFWSTVALGALVKGTPIESVERYFSLAKNSLEHFSGPATVEAIGAYTILAYVHGFFGDKVGFGRCLQQADAFLQAFVDKAPKDALPAGLEEAIQTGE--HIIRGDEAQAVVD-LCMEDISPPQMSMFPTEGEVYRYLDLAQRAIKQAYFKVAAAQNPMFSSEGDDSEREAAERTGNANSNSKETKASERLVNLNDVMKT-FEETSFKLQTLEQLADRPSIGGGVGGFIINTLLSFASAGKNNFGGTLEKVKNSIKILDRYPGFVR-FFPWSHDAHYFVALLKLSDDPEARSLYDMVRAVFNAVRPPGFQAIPPFNEWRGLSSFCNESCCREAEEIL 1203
R+ +SASPATGLVGM+EN FLSD+F GFLPLT+ S IR +VR+M ++ T+ G+++++GPS CTFW V +GALV G+P+E V Y LA+++L ++GP E A+ IL Y +GF GD F L +D+FL +++ D LPAG E I+ + + G+ A +D L PPQ + TE +V+RY+ + A +Q F+ + DD E G+ + N + + ++D M T + + L++ DR +I G+GG +IN L+ AGK + GG LE++++ +++ +RYPG R W H +H + L +D AR LYD +R V+N R PP EWRG+S+FC++ CR E I+
Sbjct: 98 RFRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHQLGASYDSPEQCQFDAILTEDGITTGSQLSTGPSACTFWCAVGVGALVNGSPVELVGNYSGLARDALNAYTGPVNAEVAKAWAILGYFYGFMGDTTTFQEYLGLSDSFLTDSIERGSTDILPAGFAEIIRHKQTVKVYAGNLDAAYIDFLGARRRDPPQANPAATELDVFRYVTQSHTAFEQLVFEKVCENSATIRPLSDDEPCEDDGGCGSPHGNPPQAEE------VSDAMVTGLRDGLIDFEHLQEAVDRSNIRQGIGGLLINMNLALQKAGKGDAGGALERLRHCVEVFERYPGVCRCMMLWCHVSHSILGALAAINDSRARELYDRLRNVYNPSRSSDSLPAPPLEEWRGMSAFCDDFQCRCFEGII 517
BLAST of mRNA_H-elongata_contig10893.725.1 vs. uniprot
Match: D8LU25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU25_ECTSI) HSP 1 Score: 230 bits (587), Expect = 8.030e-62 Identity = 148/428 (34.58%), Postives = 221/428 (51.64%), Query Frame = 1
Query: 1 RYGMSASPATGLVGMKENGFLSDYFRGFGFLPLTSESQIRETIVRIMNRTSDTKSRRE----------------------RGNEMASGPSRCTFWSTVALGALVKGTPIESVERYFSLAKNSLEHFSGPATVEAIGAYTILAYVHGFFGDKVGFGRCLQQADAFLQAFVDKAPKDALPAGLEEAIQTGE--HIIRGDEAQAVVD-LCMEDISPPQMSMFPTEGEVYRYLDLAQRAIKQAYFKVAAAQNPMFSSEGDDSEREAAERTGNANSNSKETKASERLVNLNDVMKT-FEETSFKLQTLEQLADRPSIGGGVGGFIINTLLSFASAGKNNFGGTLEKVKNSIKILDRYPGFVR-FFPWSHDAHYFVALLKLSDDPEARSLYDMVRAVFNAVRPPGFQAIPPFNEWRGLSSFCNESCCREAEEIL 1203
R+ ++ASPATGLVGM+EN FLSD+F GFLPLT+ S IR +VR+M T T R GN++++GPS CTFW V +GALVKG+P+ESV Y LA+++L+ ++GP E A+ I Y +GF GD F L AD+FL +++ D LPAG E I+ + + G+ A +D L PPQ++ EG++YRY A A ++ F+ A E G +S+ + +A + ++D M T ++ L++ DRP+I G+GG ++N L+F A + GG E++++ +++ +RYPG R W H +H +A L AR LY+ + RP F PP +EWRG S+FC++ CR E I+
Sbjct: 25 RFRLNASPATGLVGMQENVFLSDFFGCVGFLPLTTPSHIRGEMVRMM--TLSTAPHRPDASYDSLDQGQFGAIFSEDGITTGNQLSAGPSACTFWCAVGVGALVKGSPVESVANYSRLARDALDAYTGPVNAEVAKAWAISGYFYGFMGDTATFQEYLGLADSFLTDSIERGSTDILPAGFAEIIRLKQTVKVYAGNLDAAYIDFLGSRRREPPQVNPAANEGDLYRYFCQASAAFEELVFEKAXXXXXXXXXXXXXXXXX--EDRGGGSSHGADPQAED----VSDAMVTALKDGLIDFGHLQETVDRPNIRKGIGGLLMNMALAFLKATNGDTGGAFERLEHCVEVFERYPGVCRCMMLWCHVSHSILAALAAIKSSRARELYNRLXXXXXXFRPASFLPAPPLDEWRGTSAFCDDFQCRCFEGII 444
BLAST of mRNA_H-elongata_contig10893.725.1 vs. uniprot
Match: D7FH82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH82_ECTSI) HSP 1 Score: 227 bits (579), Expect = 8.830e-62 Identity = 147/421 (34.92%), Postives = 222/421 (52.73%), Query Frame = 1
Query: 43 MKENGFLSDYFRGFGFLPLTSESQIRETIVRIMNRTSDTKSRR----------------------ERGNEMASGPSRCTFWSTVALGALVKGTPIESVERYFSLAKNSLEHFSGPATVEAIGAYTILAYVHGFFGDKVGFGRCLQQADAFLQAFVDKAPKDALPAGLEEAI--QTGEHIIRGDEAQAVVD-LCMEDISPPQMSMFPTEGEVYRYLDLAQRAIKQAYFKVAAAQNPMFSSEGDDSEREAAERTGNANSNSKETKASERLVNLNDVMKTFEETSFKLQTLEQLADRPSIGGGVGGFIINTLLSFASAGKNNFGGTLEKVKNSIKILDRYPGFVRFFPWSHDAHYFVALLKLSDDPEARSLYDMVRAVFNAVRPPGFQAIPPFNEWRGLSSFCNESCCREAEEILTLAFGDTCG 1230
M+EN FL D+F GF+PLT++S IRET+V++M S T S++ N++ +G S CTFW VALGALVKG P+ SV RY LA++++E +SGP T A+ ILA+++ F GD F + +++AF A + LP G E + + + G+ + + V+ C + PPQ+ +E E+Y ++ A R +QA ++ A ++ G SE EA RT +S+ +AS +V+ + S + LE +ADRP I G+GG IIN L F A K +F G +E++ +++ + +PG RFF SH AH + L + D AR +YD +R +N+ R P IPPF EW+G+SSFC+ CR E ++ GD G
Sbjct: 1 MRENTFLGDFFACVGFVPLTTQSHIRETMVKMM--VSPTLSQKPVFWRDCDEDDVLAREGDFRMPSAENQLDAGSSTCTFWCAVALGALVKGGPVTSVARYSELARDAVESYSGPVTTGVAKAWVILAFLYLFHGDTDMFQEYMARSEAFFSASGAYGSTEVLPVGYAEVVSHRMTVRMFSGNASTSEVESFCRQPQDPPQLKAAASETELYAFMMQAYREFEQAVYRTAYLESSDAG--GLPSENEAGIRT----CSSRVREASMAVVDT--MASRISNHSCDFERLEDVADRPLIRQGIGGLIINGTLVFEKAAKGDFTGAVERIDRCVEVFEGFPGVCRFFMGSHVAHIMMTALAVIGDSRARGMYDRLRRAYNSTRLPDSTPIPPFEEWQGVSSFCDTFYCRTMELLIV---GDEMG 408
BLAST of mRNA_H-elongata_contig10893.725.1 vs. uniprot
Match: A0A6H5K8E7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8E7_9PHAE) HSP 1 Score: 229 bits (584), Expect = 7.930e-61 Identity = 144/418 (34.45%), Postives = 215/418 (51.44%), Query Frame = 1
Query: 1 RYGMSASPATGLVGMKENGFLSDYFRGFGFLPLTSESQIRETIVRIMNRTSDTKSRRER--------------------GNEMASGPSRCTFWSTVALGALVKGTPIESVERYFSLAKNSLEHFSGPATVEAIGAYTILAYVHGFFGDKVGFGRCLQQADAFLQAFVDKAPKDALPAGLEEAIQTGE--HIIRGDEAQAVVDLCMEDISPPQMSMFPTEGEVYRYLDLAQRAIKQAYFKVAAAQNPMFSSEGDDSEREAAERTGNANSNSKETKASERLVNLNDVMKT-FEETSFKLQTLEQLADRPSIGGGVGGFIINTLLSFASAGKNNFGGTLEKVKNSIKILDRYPGFVRFF-PWSHDAHYFVALLKLSDDPEARSLYDMVRAVFNAVRPPGFQAIPPFNEWRGLSSFCNESCC 1182
R +SASPATGLVGM+EN FLSD+F GF+P TS S IR +VR+M R++ R GN++ +GPS CTFW V +GAL KG+P+ESV Y LA+++++ ++GP + A+ IL Y +GF GD F L+ +D+FL A +++ LP+G E + E + G+ PQ++ TE +V+R++ + A Q + A + S DD E E G+A+ + + E ++D M T F+ + L++ D P++ G+GGF+IN L F A + G LEK+ + +++L+RYPG RF W H H +A L DD AR LY+ +R +N RP PP W+GLS+FC+ C
Sbjct: 98 RLKLSASPATGLVGMQENAFLSDFFGCVGFMPFTSRSHIRGAMVRMMARSTAQHQPGARHNSPEQSQFGDTFTEDGITPGNQLLTGPSCCTFWCAVGMGALAKGSPVESVANYSRLARDAMDAYTGPVDADVAEAWAILGYFYGFMGDTATFEEYLKLSDSFLIASIEQGSTGTLPSGFPEIVHYKECVKVFCGNVDAVDTGSFTRHQDRPQINPAATEEDVFRFVAQSVEAFVQLVVEEACGKRATRSCSSDDGPYE--EDRGDASPHGNAPRVEE----ISDAMVTGFKIGLLDFENLQEAVDLPNVRTGMGGFLINMNLVFHRAANGDAVGMLEKIGHCVEVLERYPGVCRFMLGWCHLVHAALAALAAMDDCRARGLYNRLREAYNQFRPSASLPAPPLEAWQGLSAFCDHFHC 509
BLAST of mRNA_H-elongata_contig10893.725.1 vs. uniprot
Match: A0A6H5JUG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUG6_9PHAE) HSP 1 Score: 224 bits (572), Expect = 1.090e-59 Identity = 144/432 (33.33%), Postives = 214/432 (49.54%), Query Frame = 1
Query: 1 RYGMSASPATGLVGMKENGFLSDYFRGFGFLPLTSESQIRETIVRIMNRTSDTKSRRERGNEMASG-------------------PSRCTFWSTVALGALVKGTPIESVERYFSLAKNSLEHFSGPATVEAIGAYTILAYVHGFFGDKVGFGRCLQQADAFLQAFVDKAPKDALPAGLEEAIQTGEHI--IRGD-EAQAVVDLCMEDISPPQMSMFPTEGEVYRYLDLAQRAIKQAYFKV---------AAAQNPMFSSEGDDSEREAAERTGNANSNSKETKASERLVNLNDVMKTFEETSFKLQTLEQLADRPSIGGGVGGFIINTLLSFASAGKNNFGGTLEKVKNSIKILDRYPGFVRFFPWSHDAHYFVALLKLSDDPEARSLYDMVRAVFNAVRPPGFQAIPPFNEWRGLSSFCNESCCREAEEIL 1203
R+ +SASPATGLVGM+EN FL+ +F GFLPLT+ +RET+V +M + +S ++ P CTFW VA+GAL KG PIES YF AK ++ +SGP E A+TILAY+HGF GD F L +D+F+ ++ +D+LP G E ++ GE I G E + V L +++S P TE + RY+ RAI+ + + A + ++ +G +A +R G S S+ + E + DV++ + L LE +RP I GVGG IIN L F + G LE+++ +++ + +PG RF +H AH +++ D LY+ +R N RP G A PP EW+G+S+FC+ CR E +
Sbjct: 48 RFRLSASPATGLVGMQENSFLTSFFSSVGFLPLTTRRDVRETMVTLMMSATRQQSIATEDCDVEENSHALVLENKVCNTSEGDDFPKTCTFWCAVAIGALAKGHPIESTNIYFRRAKEAMARYSGPTNFEVAKAWTILAYLHGFIGDMETFHEYLALSDSFVHDSAERGSRDSLPVGFPEVVKHGETIKLFTGTAEEEEVESLLAQEVSFPGECEVATEAHICRYIMQYHRAIEISIQQALRTPEDTPYVGADDAQYTEDGAAKGSKAGDRVGGICSLSRNPHSRELIC---DVVEGIQLQFPGLAHLEDAVERPDIRPGVGGLIINGTLFFNKTVSGDNKGALERLERCVEVFEGFPGLTRFAMGNHMAHVMLSVAASVGDSRDGGLYNRLRNACNLTRPQGSLAFPPLEEWQGISAFCDNVPCRSIEALF 476
BLAST of mRNA_H-elongata_contig10893.725.1 vs. uniprot
Match: A0A6H5JYW4_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW4_9PHAE) HSP 1 Score: 221 bits (562), Expect = 5.040e-58 Identity = 146/425 (34.35%), Postives = 219/425 (51.53%), Query Frame = 1
Query: 1 RYGMSASPATGLVGMKENGFLSDYFRGFGFLPLTSESQIRETIVRIMNRTSDTKSRRERG--------------------NEMASGPSRCTFWSTVALGALVKGTPIESVERYFSLAKNSL-EHFSGPATVEAIGAYTILAYVHGFFGDKVGFGRCLQQADAFLQAFVDKAPKDALPAGLEEAIQTGEHIIRGDEAQAVVDLCMEDISPPQMSMFPTEGEVYRYLDLAQRAIKQAYFKVAAAQNPMFSSEGDDSEREAAERTGNANSNSKETKASERLVN-LNDVMKTF--EETSFKLQTLEQLADRPSIGGGVGGFIINTLLSFASAGKNNFGGTLEKVKNSIKILDRYPGFVRFFPWSHDAHYFVALLKLSDDPEARSLYDMVRAVFNAVRPPGFQAIPPFNEWRGLSSFCNESCCREAEEIL 1203
R+ +SASPATGLVGM+EN FLSD+F GF+PLTS S IRET+VRIM + + G N++ S CTFW +ALGAL KG+P+ESV +Y LA +L + + E A+ +LAY++GF GD F L +++ L+ K + LP G E + + L E+ PPQ++ EGE+Y+Y+ + +A +QA+ + A M S+ D+ EA G+ S+ AS L +++ M T + + LE+ DRPSI GG+G +IN L F A K + TLE++ +++ + YPG R H AH + L D AR++YD +R +N+ RP + +PP+ EW+GL +FC++ CR E ++
Sbjct: 110 RFRLSASPATGLVGMQENAFLSDFFGCVGFVPLTSHSHIRETMVRIMASPAPLQQSAIGGACSEVGTMVRAPCWNEASERNQLPMDASTCTFWCAIALGALAKGSPVESVAKYRHLAHEALTKSYPSSTDAEVATAWAMLAYMYGFMGDLARFQEYLALSESCLKCATAKGFVNTLPLGFAEVVLPVKIPNASCGQWETKSLDAEEYVPPQVADVAAEGELYKYVAHSFKAFEQAFQQKAY----MQSARDVDTPGEA---EGHGESDRNRWPASAFLPGEISEAMGTVFGDRNLLVFEPLEEAVDRPSIRGGIGSLLINGTLVFEKAAKGDRQATLERIGRCVEVFELYPGMCRCTIAHHKAHVMLVCLAAIGDSSARAMYDRLRGSYNSFRPSVSRPVPPWEEWQGLGAFCDDFYCRAMEGLV 527
BLAST of mRNA_H-elongata_contig10893.725.1 vs. uniprot
Match: D8LU09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU09_ECTSI) HSP 1 Score: 203 bits (517), Expect = 7.580e-53 Identity = 139/437 (31.81%), Postives = 212/437 (48.51%), Query Frame = 1
Query: 1 RYGMSASPATGLVGMKENGFLSDYFRGFGFLPLTSESQIRETIVRIMNRTSDTK--------------------SRRERGNEMASGPSRCTFWSTVALGALVKGTPIESVERYFSLAKNSL-EHFSGPATVEAIGAYTILAYVHGFFGDKVGFGRCLQQADAFLQAFVDKAPKDALPAGLEEAIQTGEHIIRGDEAQAVVDLCMEDISPPQMSMFPTEGEVYRYLDLAQRAIKQAYFKVAAAQNPMFSSEGDDSEREAAERTGNANSNSKETKASERLVN-LNDVMKTF--EETSFKLQTLEQLADRPSIGGGVGGFIINTLLSFASAGKNNFGGTLEKVKNSIKILDRYPGFVRFFPWSHDAHYFVALLKLSDDPEARSLYDMVRAVFNAVRPPGFQAIPPFNEWRGLSSFCNESCCREAEEI----LTLAFGDTC 1227
R+ ++ASPATGLVGM+EN FLSD+F GF+PLTS S IRET+V+IM + + ++ ++ PS CTFW +ALGAL KG P+ESV +Y LA +L + + A E A+ +LAYV+GF GD F L +++FL++ K D LP G E + + L E+ PPQ++ EGE+Y+Y+ + +A +QA+ + A Q+ ++E G+ S+ + S L +++ M T + + LE+ DR L F A K + TLE++ +++ + YPG R H AH + L D AR++YD +R +N+ RP G +PP EW+G+ +FC++ CR E + L AF C
Sbjct: 6 RFRLTASPATGLVGMQENAFLSDFFGCVGFVPLTSHSHIRETMVKIMASPAPLQQSAIGGAFGGVGSMVRARCWNKASEKPQLPMDPSTCTFWCAIALGALAKGCPVESVAKYRHLAHEALTKSYPSSADAEVATAWAMLAYVYGFMGDLAKFQEYLALSESFLKSATAKRCTDTLPLGFAEVVLPVKIPNASCGQWETKSLDAEERVPPQLADVAAEGELYKYIAQSFKAFEQAFQQKAYKQSARDVETPGETE-------GHGESDRNRRRPSALLPGEISEAMGTVFGDRNLLVFEPLEEAVDRT--------------LVFEKAAKGDRRATLERIGRCVEVFELYPGMCRCTISHHKAHIMLVCLAAIGDSSARAMYDRLRGSYNSFRPAGSLPVPPLEEWQGVGAFCDDFYCRAMEGLVASDLMKAFSAPC 421
BLAST of mRNA_H-elongata_contig10893.725.1 vs. uniprot
Match: D7FMR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR8_ECTSI) HSP 1 Score: 198 bits (503), Expect = 2.450e-52 Identity = 124/351 (35.33%), Postives = 181/351 (51.57%), Query Frame = 1
Query: 178 GNEMASGPSRCTFWSTVALGALVKGTPIESVERYFSLAKNSLEHFSGPATVEAIGAYTILAYVHGFFGDKVGFGRCLQQADAFLQAFVDKAPKDALPAGLEEAIQTGEHIIRGDEAQAVVDLCMEDISPPQMSMF-------------PTEGEVYRYLDLAQRAIKQAYFKVAAAQNPMFSSEGDDSEREAAERTGNANSNSKETKASERLVNLNDVMKT-FEETSFKLQTLEQLADRPSIGGGVGGFIINTLLSFASAGKNNFGGTLEKVKNSIKILDRYPGFVRF-FPWSHDAHYFVALLKLSDDPEARSLYDMVRAVFNAVRPPGFQAIPPFNEWRGLSSFCNESCCR 1185
G ++ PS C FW VALGALVKG P+ESV YF A+ SL+ ++GPA E A+TIL Y++GF GD F L AD+FL A +++ D LPAG E + R D V +C +++ P M F +GE+YRY+ + + +Q + A A++ DD R G ++K+ E ++ D M T + LE+ A+RP I GVGG IIN L F A K + GTLE++++ +++ +RYPG R W H AH +A L + +AR LYD +R V+N RPP + +P +W+G+ S C++ CR
Sbjct: 52 GTQLPMDPSTCIFWCAVALGALVKGNPLESVASYFRWARVSLDSYTGPANPEVAKAWTILGYLYGFMGDMAKFEEYLGFADSFLTASINEGSADTLPAGFAEIVH------RKD----TVKVCSDNLDPADMESFCARHRDAPRICEAVNDGELYRYVTQSFKVFQQVAYAKACAKSASRRRLSDDQCRA----EGGEGVSAKDCGPLED--DVLDAMATGLRGYVIEFDQLEETANRPRIRAGVGGLIINGTLVFERAAKGDAEGTLERIRHCVEVFERYPGLCRCTMRWCHIAHAMLAALAAVNGSQARRLYDRLRVVYNVSRPPELRPVPALEDWQGIPSICDDFLCR 386 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10893.725.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10893.725.1 >prot_H-elongata_contig10893.725.1 ID=prot_H-elongata_contig10893.725.1|Name=mRNA_H-elongata_contig10893.725.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=613bp MSASPATGLVGMKENGFLSDYFRGFGFLPLTSESQIRETIVRIMNRTSDTback to top mRNA from alignment at H-elongata_contig10893:1323..7550+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10893.725.1 ID=mRNA_H-elongata_contig10893.725.1|Name=mRNA_H-elongata_contig10893.725.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6228bp|location=Sequence derived from alignment at H-elongata_contig10893:1323..7550+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10893:1323..7550+ >mRNA_H-elongata_contig10893.725.1 ID=mRNA_H-elongata_contig10893.725.1|Name=mRNA_H-elongata_contig10893.725.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3678bp|location=Sequence derived from alignment at H-elongata_contig10893:1323..7550+ (Himanthalia elongata Himel1 dioecious)back to top |