prot_H-elongata_contig1089.722.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1089.722.1
Unique Nameprot_H-elongata_contig1089.722.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length350
Homology
BLAST of mRNA_H-elongata_contig1089.722.1 vs. uniprot
Match: D7G8X8_ECTSI (GYF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8X8_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 4.370e-37
Identity = 159/403 (39.45%), Postives = 186/403 (46.15%), Query Frame = 0
Query:    1 MDEGAMEEAIGAASSRAMKNKDGA----GAGSGASTLVAGG--NSVAGMGTAEMREALIPLLEEGETVVQALRRLGKQKKGAEGRGRLPGEKRKPGASRTKDSGDRANENTASEENGTKER------------------------------------EGRGSSTEKKAVDAEENKRRESFGRLTDLADGLLQAGLHDVYQLTKEEMEEMAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADYQAYQQNQYQSSVAAGETGNESTWFEYRGKDENIHGPYGASHMKGWVQQGYFDGDQAVMMRKVSRGGDKVSGGEGAGMGGGATGGYTKGDNIPTTERSNADLMADLDDXXXXXXXXXXXXXXEK------------ANHDGEGDGAAEWVMSDRIDWSSY 349
            MDE AMEEAIGAAS+RA K  +GA    GA  GA   + GG   S++ MGTAEMREALIPLL E ETVVQALRRLG +K+                                                                             +G  +     AV   E KRRE F RLT+LAD LLQAG HDVYQ TKE++EE                                AA+          ++  AGE   ES +FEYRGKD N+HGPYGAS M+GW QQGYFDG+QAVMMR+V     +   GE      G T    +G        SNADLMADL D XXXXXXXXXXXXX              +   G+     EWV+SD IDW+S+
Sbjct:  182 MDEEAMEEAIGAASTRAPKPSEGAAGATGAAGGAVAPLGGGAAESLSVMGTAEMREALIPLLLEDETVVQALRRLGAKKQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGSPAGARSTAV---EKKRREDFARLTELADALLQAGQHDVYQQTKEDLEE--------------------------------AAEVAXXXXXXXAATSGAGE---ESAYFEYRGKDGNVHGPYGASQMRGWAQQGYFDGEQAVMMRRV-----QPKNGEATTSTNGGTSKQAEGTPAKDPPSSNADLMADLHDDXXXXXXXXXXXXXXXXXXXXXXXXXXASRGPGKTSSQEEWVLSDNIDWTSF 541          
BLAST of mRNA_H-elongata_contig1089.722.1 vs. uniprot
Match: A0A6H5JI10_9PHAE (GYF domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI10_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 7.290e-28
Identity = 164/403 (40.69%), Postives = 186/403 (46.15%), Query Frame = 0
Query:    1 MDEGAMEEAIGAASSRAMKNKDGA----GAGSGASTLVAGG--NSVAGMGTAEMREALIPLLEEGETVVQALRRLGKQKKGAEGRGRLPGEKRKPGASRTKDSGDRANENTASEENGTKEREGRGSSTEKKAVDAEENKRR-----------------------------ESFGRLTDLADGLLQAGLHDVYQLTKEEMEEMAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADYQAYQQNQYQSSVAAGETG-------NESTWFEYRGKDENIHGPYGASHMKGWVQQ---GYFDGDQAVMMRKVSRGGDKVSGGEGAGMGGGATGGYTKGDNIPTTERSNADLMADLDDXXXXXXXXXXXXXXEKANHDGEGDGAA---------EWVMSDRIDWSSY 349
            MDE AMEEAIGAAS+RA K  +GA        GA   + GG   S++ MGTAEMREALIPLL E ETVVQALRRLG +K+                                                                                          E F RLT+LAD LLQAG HDVYQ TKE++EE A  XXXXXXXXXXXXXXXXXXXXXXXXXXXX                              ES +FEYRGKD N+HGPYGAS M+GW QQ   GYFDG+QAVMMR+V     +   GE      G T    +G        SNADL+ADLDD              E A     GD +          EWV+SD IDW+S+
Sbjct:  171 MDEEAMEEAIGAASTRAPKPSEGATXXXXXXXGAVAPLGGGAAESLSVMGTAEMREALIPLLLEDETVVQALRRLGVKKQSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDFARLTELADALLQAGQHDVYQQTKEDLEEAAEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEESAYFEYRGKDGNVHGPYGASQMRGWAQQASMGYFDGEQAVMMRRV-----QSKNGEAIASTNGGTSKQAEGTPAQDAPTSNADLLADLDDDEEVEEKDKKEGKGEPAASXXXGDASGGTGKISSQEEWVLSDNIDWTSF 568          
BLAST of mRNA_H-elongata_contig1089.722.1 vs. uniprot
Match: A0A2D4BK94_PYTIN (GYF domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK94_PYTIN)

HSP 1 Score: 57.0 bits (136), Expect = 1.620e-5
Identity = 94/222 (42.34%), Postives = 110/222 (49.55%), Query Frame = 0
Query:   47 EMREALIPLLEEGETVVQALRRLGKQKKGAEGRGRLPGEKRKPGASRTKDSGDRANENTASEENGTKEREGRGSSTEKKAVDAEENKRRESFGRLTDLADGLLQAGLHDVYQLTKEEM--EEMAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADYQAYQQNQYQSSVAAGETGNESTWFEYRGKDENIHGPYGASHMKGWVQQGYFDGDQAVMMRKVSR 266
            E    L  LL+  ETV+QALRRLGK++              KP A   +   D                   G STE  A   EE   +E F R+T+ AD L++ G  DVY   KEE   EE    XXXXXXXXXXXXXXXXXXXXXXXXXXXX                    T +E  W EY+G D  IHGP+  S    W QQGYF GD AV +R+V +
Sbjct:   82 EANRILATLLQPRETVLQALRRLGKKRS-------------KPRAGNKRKHADN------------------GHSTEAPAQTVEE---KEQFERITEAADFLMRIGEIDVYSQMKEEFVSEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------TKDEVMW-EYKGADGQIHGPFSTSAFIAWQQQGYFVGDSAVDIRRVDQ 251          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1089.722.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G8X8_ECTSI4.370e-3739.45GYF domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JI10_9PHAE7.290e-2840.69GYF domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A2D4BK94_PYTIN1.620e-542.34GYF domain-containing protein n=1 Tax=Pythium insi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 157..177
IPR003169GYF domainSMARTSM00444gyf_5coord: 224..274
e-value: 0.0035
score: 23.7
IPR003169GYF domainPFAMPF02213GYFcoord: 226..256
e-value: 6.2E-8
score: 32.2
IPR003169GYF domainPROSITEPS50829GYFcoord: 222..280
score: 10.589
IPR039905CD2 antigen cytoplasmic tail-binding protein 2/Lin1PANTHERPTHR13138PROTEIN LIN1coord: 31..265
IPR035445GYF-like domain superfamilySUPERFAMILY55277GYF domaincoord: 219..261

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1089contigH-elongata_contig1089:1943..4939 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1089.722.1mRNA_H-elongata_contig1089.722.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1089 852..5942 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1089.722.1 ID=prot_H-elongata_contig1089.722.1|Name=mRNA_H-elongata_contig1089.722.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=350bp
MDEGAMEEAIGAASSRAMKNKDGAGAGSGASTLVAGGNSVAGMGTAEMRE
ALIPLLEEGETVVQALRRLGKQKKGAEGRGRLPGEKRKPGASRTKDSGDR
ANENTASEENGTKEREGRGSSTEKKAVDAEENKRRESFGRLTDLADGLLQ
AGLHDVYQLTKEEMEEMAAEAAEAAAAVVARASSSASYFGGAGRRGGGAA
DYQAYQQNQYQSSVAAGETGNESTWFEYRGKDENIHGPYGASHMKGWVQQ
GYFDGDQAVMMRKVSRGGDKVSGGEGAGMGGGATGGYTKGDNIPTTERSN
ADLMADLDDEEEEEEEEKVGGGGEKANHDGEGDGAAEWVMSDRIDWSSY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003169GYF
IPR039905CD2BP2/Lin1
IPR035445GYF-like_dom_sf