mRNA_H-elongata_contig108812.715.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig108812.715.1
Unique NamemRNA_H-elongata_contig108812.715.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig108812.715.1 vs. uniprot
Match: D7FV23_ECTSI (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV23_ECTSI)

HSP 1 Score: 263 bits (673), Expect = 4.000e-79
Identity = 131/144 (90.97%), Postives = 140/144 (97.22%), Query Frame = 1
Query:   40 QVNGCPKTIDGDLKNEYVPISFGFDTAAKTFSEEIGNVQLDAMASQKYYHFIRLMGRAASNIALECALQTRPNVCLISEEVEAKHSSLKEIVDDLVDVVVKRAKAGKNYGVVMLPEGLIEFIPEFNALISDINEVLASGIPPTI 471
            +VNGCPKTIDGDLKNEYVPISFGFDTAAKTFSEEIGNVQLDA+ASQKYYHFIRLMGRAASNIALECALQTRPNVCLISEEVEAK  SLK+IVD+LV++++KRA AGKNYGVVMLPEGLIEFIPEFNALISDIN+VLASGIP TI
Sbjct:  207 KVNGCPKTIDGDLKNEYVPISFGFDTAAKTFSEEIGNVQLDALASQKYYHFIRLMGRAASNIALECALQTRPNVCLISEEVEAKGLSLKQIVDELVEMILKRADAGKNYGVVMLPEGLIEFIPEFNALISDINDVLASGIPTTI 350          
BLAST of mRNA_H-elongata_contig108812.715.1 vs. uniprot
Match: A0A835YX68_9STRA (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX68_9STRA)

HSP 1 Score: 238 bits (606), Expect = 9.290e-70
Identity = 117/144 (81.25%), Postives = 130/144 (90.28%), Query Frame = 1
Query:   40 QVNGCPKTIDGDLKNEYVPISFGFDTAAKTFSEEIGNVQLDAMASQKYYHFIRLMGRAASNIALECALQTRPNVCLISEEVEAKHSSLKEIVDDLVDVVVKRAKAGKNYGVVMLPEGLIEFIPEFNALISDINEVLASGIPPTI 471
            +V GCPKTIDGDLKNEY+PISFGFDTAAKTFSEEIGNV LD +ASQKYYHFIRLMGRAASNIALECALQTRPNVCLISEEVEAK  +L +I +D+ D+VV RA AGK+YGV MLPEGLIEFIPEFN LI++IN VLASG+ P+I
Sbjct:  208 RVCGCPKTIDGDLKNEYIPISFGFDTAAKTFSEEIGNVALDTLASQKYYHFIRLMGRAASNIALECALQTRPNVCLISEEVEAKGMNLLQITNDIADMVVARAAAGKHYGVCMLPEGLIEFIPEFNRLIAEINNVLASGVEPSI 351          
BLAST of mRNA_H-elongata_contig108812.715.1 vs. uniprot
Match: A0A835YKH2_9STRA (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKH2_9STRA)

HSP 1 Score: 233 bits (594), Expect = 6.500e-69
Identity = 114/144 (79.17%), Postives = 128/144 (88.89%), Query Frame = 1
Query:   40 QVNGCPKTIDGDLKNEYVPISFGFDTAAKTFSEEIGNVQLDAMASQKYYHFIRLMGRAASNIALECALQTRPNVCLISEEVEAKHSSLKEIVDDLVDVVVKRAKAGKNYGVVMLPEGLIEFIPEFNALISDINEVLASGIPPTI 471
            +V GCPKTIDGDLKNEY+PISFGFDTA KTFSEEIGNV LD +ASQKYYHFIRLMGRAASNIALECALQTRPN+CLISEEVEAK  +L +I  D+ D+VV RA  GK+YG+V+LPEGLIEFIPEFN LI++IN VLASG+ PTI
Sbjct:  216 KVCGCPKTIDGDLKNEYIPISFGFDTAVKTFSEEIGNVALDTLASQKYYHFIRLMGRAASNIALECALQTRPNMCLISEEVEAKGMNLLQITHDIADMVVARAAKGKHYGMVLLPEGLIEFIPEFNHLIAEINNVLASGVEPTI 359          
BLAST of mRNA_H-elongata_contig108812.715.1 vs. uniprot
Match: A0A812VW95_SYMMI (Pfp protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VW95_SYMMI)

HSP 1 Score: 212 bits (540), Expect = 1.060e-65
Identity = 108/144 (75.00%), Postives = 123/144 (85.42%), Query Frame = 1
Query:   40 QVNGCPKTIDGDLK-NEYVPISFGFDTAAKTFSEEIGNVQLDAMASQKYYHFIRLMGRAASNIALECALQTRPNVCLISEEVEAKHSSLKEIVDDLVDVVVKRAK-AGKNYGVVMLPEGLIEFIPEFNALISDINEVLASGIPP 465
            +V G PKTIDGDLK + Y+PISFGFDTA +T+SE IGNV  D ++SQKYYHFIRLMGRAASNIALECALQTRPNVCLISEEVEAK  +L EI   +VD +V R++  GKNYGVV+LPEGLIEFIPEFN LISDIN+VLA+G PP
Sbjct:   91 KVCGAPKTIDGDLKVDPYIPISFGFDTACRTYSELIGNVGQDTLSSQKYYHFIRLMGRAASNIALECALQTRPNVCLISEEVEAKKMTLSEITQQVVDTIVMRSEDMGKNYGVVLLPEGLIEFIPEFNRLISDINDVLAAGTPP 234          
BLAST of mRNA_H-elongata_contig108812.715.1 vs. uniprot
Match: A0A7S3UUX1_HETAK (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUX1_HETAK)

HSP 1 Score: 211 bits (537), Expect = 1.830e-60
Identity = 97/142 (68.31%), Postives = 120/142 (84.51%), Query Frame = 1
Query:   40 QVNGCPKTIDGDLKNEYVPISFGFDTAAKTFSEEIGNVQLDAMASQKYYHFIRLMGRAASNIALECALQTRPNVCLISEEVEAKHSSLKEIVDDLVDVVVKRAKAGKNYGVVMLPEGLIEFIPEFNALISDINEVLASGIPP 465
            +V GCPKTIDGDLKNEY+PISFGFDTA +TFSEEIGNV +D +++QKYYHF+RLMGR A+N+ALECALQTRPN+C I EEVEA + SL  + + +VD++  RA AGK+YGVV+LPEGLI FIPEF  LI++IN++LA G  P
Sbjct:  204 KVIGCPKTIDGDLKNEYIPISFGFDTACRTFSEEIGNVMVDTLSTQKYYHFVRLMGREAANVALECALQTRPNMCFIGEEVEASNMSLAAVTNQVVDMICARAAAGKHYGVVLLPEGLIGFIPEFGVLIAEINDILAEGATP 345          
BLAST of mRNA_H-elongata_contig108812.715.1 vs. uniprot
Match: UPI000711FECA (diphosphate--fructose-6-phosphate 1-phosphotransferase n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711FECA)

HSP 1 Score: 202 bits (513), Expect = 5.530e-60
Identity = 92/138 (66.67%), Postives = 118/138 (85.51%), Query Frame = 1
Query:   43 VNGCPKTIDGDLKNEYVPISFGFDTAAKTFSEEIGNVQLDAMASQKYYHFIRLMGRAASNIALECALQTRPNVCLISEEVEAKHSSLKEIVDDLVDVVVKRAKAGKNYGVVMLPEGLIEFIPEFNALISDINEVLASG 456
            V GCPKTIDGDLKNEY+PISFGFDTA K +SE IGN+ +DA+++QKYYHF+RLMGR+AS+I +ECA +T PN   I EE+ AK  S+KEI  ++VD++V+RAK GKNYGV++LPEGLIEFIPE  ALIS++N+V+A+G
Sbjct:  150 VIGCPKTIDGDLKNEYIPISFGFDTACKIYSELIGNICVDALSAQKYYHFVRLMGRSASHITMECAFETHPNYTFIGEEISAKKKSVKEITREVVDLIVERAKIGKNYGVILLPEGLIEFIPEMGALISELNDVIAAG 287          
BLAST of mRNA_H-elongata_contig108812.715.1 vs. uniprot
Match: W7TMW0_9STRA (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMW0_9STRA)

HSP 1 Score: 206 bits (524), Expect = 1.350e-58
Identity = 96/156 (61.54%), Postives = 127/156 (81.41%), Query Frame = 1
Query:    1 VLSLSYVITTFDGQVNGCPKTIDGDLKNEYVPISFGFDTAAKTFSEEIGNVQLDAMASQKYYHFIRLMGRAASNIALECALQTRPNVCLISEEVEAKHSSLKEIVDDLVDVVVKRAKAGKNYGVVMLPEGLIEFIPEFNALISDINEVLASGIPPT 468
            VL+  +       +V G PKTIDGDLKN+Y+P+SFGFDTA KT+SE IGNV LD ++SQKYYHF+RLMGR+AS+IALECALQTRPN  LISEEVEA+H SL ++   LV ++++RAK GK+YGV++LPEG+IEFIPEF  L+ ++N+++A+G+  T
Sbjct:  129 VLAEYFAANGCSTRVIGAPKTIDGDLKNDYIPVSFGFDTACKTYSELIGNVMLDCLSSQKYYHFVRLMGRSASHIALECALQTRPNATLISEEVEAEHLSLSQVTHSLVRMILERAKQGKHYGVILLPEGIIEFIPEFQTLMHELNDLMAAGVANT 284          
BLAST of mRNA_H-elongata_contig108812.715.1 vs. uniprot
Match: A0A5C1QIW6_9SPIO (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase n=1 Tax=Thiospirochaeta perfilievii TaxID=252967 RepID=A0A5C1QIW6_9SPIO)

HSP 1 Score: 199 bits (507), Expect = 1.800e-58
Identity = 92/136 (67.65%), Postives = 118/136 (86.76%), Query Frame = 1
Query:   43 VNGCPKTIDGDLKNEYVPISFGFDTAAKTFSEEIGNVQLDAMASQKYYHFIRLMGRAASNIALECALQTRPNVCLISEEVEAKHSSLKEIVDDLVDVVVKRAKAGKNYGVVMLPEGLIEFIPEFNALISDINEVLA 450
            V GCPKTIDGDLKNE++  SFGFDTA KT+SE IGN+Q DA +++KY+HFI+LMGR+AS+I LECALQT+PN+C+ISEE+EAK  +L  +VDD+VDVVVKR++ G N+GV ++PEGLIEFIPE N LIS++N +LA
Sbjct:  198 VVGCPKTIDGDLKNEHIETSFGFDTACKTYSELIGNIQRDANSAKKYWHFIKLMGRSASHIGLECALQTQPNICIISEEIEAKAQTLDSVVDDIVDVVVKRSQNGDNFGVALIPEGLIEFIPEMNVLISELNNLLA 333          
BLAST of mRNA_H-elongata_contig108812.715.1 vs. uniprot
Match: A0A5C1QKW6_9SPIO (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase n=1 Tax=Oceanispirochaeta crateris TaxID=2518645 RepID=A0A5C1QKW6_9SPIO)

HSP 1 Score: 198 bits (503), Expect = 6.980e-58
Identity = 91/136 (66.91%), Postives = 118/136 (86.76%), Query Frame = 1
Query:   43 VNGCPKTIDGDLKNEYVPISFGFDTAAKTFSEEIGNVQLDAMASQKYYHFIRLMGRAASNIALECALQTRPNVCLISEEVEAKHSSLKEIVDDLVDVVVKRAKAGKNYGVVMLPEGLIEFIPEFNALISDINEVLA 450
            V GCPKTIDGDLKNEY+  SFGFDTA KT+SE IGN++ DA +++KY+HFI+LMGR+AS+I LECALQT+PN+C+ISEEVEAK  +LK++VD + DV+VKRA+ G N+GV ++PEGLIEFIPE  ALIS++N+ +A
Sbjct:  198 VIGCPKTIDGDLKNEYIETSFGFDTATKTYSELIGNIEKDANSAKKYWHFIKLMGRSASHIGLECALQTQPNICIISEEVEAKKMTLKQVVDQVADVIVKRAEKGLNFGVALIPEGLIEFIPEVGALISELNDKMA 333          
BLAST of mRNA_H-elongata_contig108812.715.1 vs. uniprot
Match: D8LY18_BLAHO (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8LY18_BLAHO)

HSP 1 Score: 196 bits (499), Expect = 2.080e-57
Identity = 87/138 (63.04%), Postives = 116/138 (84.06%), Query Frame = 1
Query:   43 VNGCPKTIDGDLKNEYVPISFGFDTAAKTFSEEIGNVQLDAMASQKYYHFIRLMGRAASNIALECALQTRPNVCLISEEVEAKHSSLKEIVDDLVDVVVKRAKAGKNYGVVMLPEGLIEFIPEFNALISDINEVLASG 456
            V GCPKTIDGDLKN+Y+P+SFGFDTA K +SE IGN+ +DA+++QKYYHF+RLMGR+AS+I +ECA +T PN   I EE+  K  S+K+I  ++VD++V+RAK GKNYGV++LPEGLIEFIPE  +LI ++NEV+A+G
Sbjct:  189 VIGCPKTIDGDLKNDYIPVSFGFDTACKIYSELIGNICVDALSAQKYYHFVRLMGRSASHITMECAFETHPNYTFIGEEISQKKKSVKQITQEVVDLIVERAKLGKNYGVILLPEGLIEFIPEMGSLIEELNEVIAAG 326          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig108812.715.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV23_ECTSI4.000e-7990.97Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
A0A835YX68_9STRA9.290e-7081.25Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
A0A835YKH2_9STRA6.500e-6979.17Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
A0A812VW95_SYMMI1.060e-6575.00Pfp protein (Fragment) n=1 Tax=Symbiodinium microa... [more]
A0A7S3UUX1_HETAK1.830e-6068.31Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
UPI000711FECA5.530e-6066.67diphosphate--fructose-6-phosphate 1-phosphotransfe... [more]
W7TMW0_9STRA1.350e-5861.54Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
A0A5C1QIW6_9SPIO1.800e-5867.65Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
A0A5C1QKW6_9SPIO6.980e-5866.91Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
D8LY18_BLAHO2.080e-5763.04Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig108812contigH-elongata_contig108812:43..1365 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score262.3
Seed ortholog evalue1.5e-67
Seed eggNOG ortholog2880.D7FV23
Preferred namePFP-BETA
KEGG rclassRC00017
KEGG koko:K00895
KEGG ReactionR00764,R02073
KEGG Pathwayko00010,ko00030,ko00051,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map01100,map01110,map01120,map01130
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006793,GO:0006796,GO:0007275,GO:0008150,GO:0008152,GO:0008443,GO:0009719,GO:0009725,GO:0009735,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010154,GO:0015979,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019200,GO:0022414,GO:0030312,GO:0032501,GO:0032502,GO:0042221,GO:0044237,GO:0044238,GO:0044262,GO:0044424,GO:0044444,GO:0044464,GO:0046686,GO:0046835,GO:0047334,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0050896,GO:0061458,GO:0071704,GO:0071944
EggNOG free text desc.6-phosphofructokinase activity
EggNOG OGsCOG0205@1,KOG2440@2759
EC2.7.1.90
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPhosphofructokinase
Ec32 orthologEc-14_003880.1
Exons3
Model size483
Cds size483
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig108812.715.1prot_H-elongata_contig108812.715.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig108812 43..1365 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929615.4550605-CDS-H-elongata_contig108812:42..1761622929615.4550605-CDS-H-elongata_contig108812:42..176Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig108812 43..176 +
1691679092.2776701-CDS-H-elongata_contig108812:42..1761691679092.2776701-CDS-H-elongata_contig108812:42..176Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig108812 43..176 +
1622929615.471746-CDS-H-elongata_contig108812:673..8481622929615.471746-CDS-H-elongata_contig108812:673..848Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig108812 674..848 +
1691679092.2877636-CDS-H-elongata_contig108812:673..8481691679092.2877636-CDS-H-elongata_contig108812:673..848Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig108812 674..848 +
1622929615.4885201-CDS-H-elongata_contig108812:1191..13651622929615.4885201-CDS-H-elongata_contig108812:1191..1365Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig108812 1192..1365 +
1691679092.295136-CDS-H-elongata_contig108812:1191..13651691679092.295136-CDS-H-elongata_contig108812:1191..1365Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig108812 1192..1365 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig108812.715.1

>prot_H-elongata_contig108812.715.1 ID=prot_H-elongata_contig108812.715.1|Name=mRNA_H-elongata_contig108812.715.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=161bp
VLSLSYVITTFDGQVNGCPKTIDGDLKNEYVPISFGFDTAAKTFSEEIGN
VQLDAMASQKYYHFIRLMGRAASNIALECALQTRPNVCLISEEVEAKHSS
LKEIVDDLVDVVVKRAKAGKNYGVVMLPEGLIEFIPEFNALISDINEVLA
SGIPPTIGEHR
back to top

mRNA from alignment at H-elongata_contig108812:43..1365+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig108812.715.1 ID=mRNA_H-elongata_contig108812.715.1|Name=mRNA_H-elongata_contig108812.715.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1323bp|location=Sequence derived from alignment at H-elongata_contig108812:43..1365+ (Himanthalia elongata Himel1 dioecious)
GTGCTCTCCTTGAGTTATGTTATCACCACCTTTGACGGACAGGTAAACGG GTGCCCGAAAACGATCGACGGTGACCTGAAGAACGAGTACGTGCCCATTA GCTTCGGCTTCGACACCGCTGCCAAGACGTTCAGGTGCGCAAAACGCTTC CAGCGGTGCTCTGTTTTCAACACCCGTACGGCAATGGTCCTGCTAGTGGT GAATTGATACCGATGGAGAGGGGTAAGGAAACGAACATGCGTCTAGCAGC GATCCGTCCCCGACAGACCGTCACGAAAATCGTGGGGAATAGTGAGAGGG GGGGGCGGGGATGAGGGAGGGGGAGGGAAAGGGCTTCCACACGTGATCCT GAAACCTCAAGAGGTTCGACGCTCGGAAGAGGTACGAGTACTACAGCTAT AGTCCAGCCCTGATGATTTCCAACAAAAATGCGACGACCAATCCTCTGCG ACGGTAAACGCTGATACGTGATTTGCCGAGGGTCTGACACCACCCTCCGT CCCTCGTGACTCCTGTGACGCTAAAGCGTTTTCTCACGCTCGGAATTTTC CACCGCCACACCTACTTGTGTTGATTGCGTTAATTACGTGGCGCGATCGG GGGGGATGGCTGGTATTGGCGATACGTACAGCGAGGAGATCGGGAACGTT CAGCTGGATGCCATGGCGTCTCAGAAATACTACCACTTCATTCGCCTCAT GGGGAGGGCCGCATCCAACATCGCGCTGGAGTGCGCGCTGCAGACACGAC CCAACGTCTGCCTTATCAGCGAGGAGGTCGAGGCGAAGCACTCGTCCCTC AAAGAGGTGGGAAATGGTGGGAAAACGGGTAGTTTTCCTCCTTAGTAGTT TTTCTGCACGATCTCAAGGTAAAATACTTACGCTCCTGGGCGTTGGCAAC TGCGGATGTACCCATGTCGCGGTGTTTTTTATTGAGTGTGGATGTAGGTG TGTCTTTGGGTGTATTTATTAAATTGAACATAACCGCGCAATCCAGCACT GTCATGCTAGCTCTTCTAGGCAACTCTCGTATGATCCTTCGAGTGGGGGA TTCAATCATGTGTGTGTGTATGTTTTGCGAGGACCATAACCATCGTGTAG TACAGGTAGTGCTATTCCTGAGCTAAGAGTGCCTCGTTGGAAACGACAGA TCGTGGACGACTTGGTGGACGTCGTCGTCAAGCGCGCCAAGGCAGGCAAG AACTATGGCGTGGTAATGCTCCCCGAGGGGCTCATCGAATTCATCCCTGA GTTCAACGCGTTGATCAGCGACATCAACGAGGTGCTTGCCAGCGGCATCC CCCCCACCATCGGTGAGCACCGC
back to top

Coding sequence (CDS) from alignment at H-elongata_contig108812:43..1365+

>mRNA_H-elongata_contig108812.715.1 ID=mRNA_H-elongata_contig108812.715.1|Name=mRNA_H-elongata_contig108812.715.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=966bp|location=Sequence derived from alignment at H-elongata_contig108812:43..1365+ (Himanthalia elongata Himel1 dioecious)
GTGCTCTCCTTGAGTTATGTTATCACCACCTTTGACGGACAGGTAAACGG
GTGCCCGAAAACGATCGACGGTGACCTGAAGAACGAGTACGTGCCCATTA
GCTTCGGCTTCGACACCGCTGCCAAGACGTTCAGGTGCTCTCCTTGAGTT
ATGTTATCACCACCTTTGACGGACAGGTAAACGGGTGCCCGAAAACGATC
GACGGTGACCTGAAGAACGAGTACGTGCCCATTAGCTTCGGCTTCGACAC
CGCTGCCAAGACGTTCAGCGAGGAGATCGGGAACGTTCAGCTGGATGCCA
TGGCGTCTCAGAAATACTACCACTTCATTCGCCTCATGGGGAGGGCCGCA
TCCAACATCGCGCTGGAGTGCGCGCTGCAGACACGACCCAACGTCTGCCT
TATCAGCGAGGAGGTCGAGGCGAAGCACTCGTCCCTCAAAGAGCGAGGAG
ATCGGGAACGTTCAGCTGGATGCCATGGCGTCTCAGAAATACTACCACTT
CATTCGCCTCATGGGGAGGGCCGCATCCAACATCGCGCTGGAGTGCGCGC
TGCAGACACGACCCAACGTCTGCCTTATCAGCGAGGAGGTCGAGGCGAAG
CACTCGTCCCTCAAAGAGATCGTGGACGACTTGGTGGACGTCGTCGTCAA
GCGCGCCAAGGCAGGCAAGAACTATGGCGTGGTAATGCTCCCCGAGGGGC
TCATCGAATTCATCCCTGAGTTCAACGCGTTGATCAGCGACATCAACGAG
GTGCTTGCCAGCGGCATCCCCCCCACCATCGGTGAGCACCGCATCGTGGA
CGACTTGGTGGACGTCGTCGTCAAGCGCGCCAAGGCAGGCAAGAACTATG
GCGTGGTAATGCTCCCCGAGGGGCTCATCGAATTCATCCCTGAGTTCAAC
GCGTTGATCAGCGACATCAACGAGGTGCTTGCCAGCGGCATCCCCCCCAC
CATCGGTGAGCACCGC
back to top