mRNA_H-elongata_contig108737.708.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig108737.708.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 279 bits (714), Expect = 1.780e-86 Identity = 134/162 (82.72%), Postives = 146/162 (90.12%), Query Frame = 1
Query: 1 WCWYFCHLMVKAAEQAFGIHLHPTKPKNPAARDLLRKVVKVVENLNKSPNFKAKFEDLQMDLLGEVFKIVKHMPQRWLNLTRTLERIIRLWHVLTKLYSDECKNFPLEEGDNKNAILQLYSLLQPLSSIARDGQYDGATMMADIFMKFGKLNIEVLDPSKDL 486
WCW FCHLMVKAAEQA+GIHL P K KNP ARD+L+KVVKVVENLNKSPNFKAKFEDLQ+D+LGE+FK+VKH PQRWL+LTRT+ER IRLWHVL KLYSDE +NFPLEEGD K+AILQLYSLLQPLSSI RDGQY A MMADIFMKFG LN +VLDPSKDL
Sbjct: 358 WCWCFCHLMVKAAEQAYGIHLDPAKSKNPQARDILKKVVKVVENLNKSPNFKAKFEDLQVDMLGEIFKMVKHAPQRWLSLTRTVERTIRLWHVLRKLYSDEGRNFPLEEGDTKDAILQLYSLLQPLSSITRDGQYGDAPMMADIFMKFGMLNTDVLDPSKDL 519
BLAST of mRNA_H-elongata_contig108737.708.1 vs. uniprot
Match: A0A6H5KEE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE6_9PHAE) HSP 1 Score: 238 bits (606), Expect = 7.650e-74 Identity = 115/162 (70.99%), Postives = 129/162 (79.63%), Query Frame = 1
Query: 1 WCWYFCHLMVKAAEQAFGIHLHPTKPKNPAARDLLRKVVKVVENLNKSPNFKAKFEDLQMDLLGEVFKIVKHMPQRWLNLTRTLERIIRLWHVLTKLYSDECKNFPLEEGDNKNAILQLYSLLQPLSSIARDGQYDGATMMADIFMKFGKLNIEVLDPSKDL 486
W W FCHLMVKAAE FG H+ P K KNP ARD+L+ V+ +V LN+S NFKAKFEDLQ+DLLG+V KI PQRWL RTLER+IRLWHVL KLYSD KNFPLEEGDNKNAILQL+SLLQ LSS+ RDGQY A M AD+FMKFG+L +EVLDPSK L
Sbjct: 74 WNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKNVISMVGTLNRSSNFKAKFEDLQVDLLGDVLKIPNQAPQRWLTQVRTLERVIRLWHVLRKLYSDAGKNFPLEEGDNKNAILQLFSLLQSLSSVTRDGQYGNAPMQADVFMKFGELKMEVLDPSKPL 235
BLAST of mRNA_H-elongata_contig108737.708.1 vs. uniprot
Match: A0A6H5L8D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D8_9PHAE) HSP 1 Score: 228 bits (582), Expect = 5.460e-72 Identity = 109/162 (67.28%), Postives = 129/162 (79.63%), Query Frame = 1
Query: 1 WCWYFCHLMVKAAEQAFGIHLHPTKPKNPAARDLLRKVVKVVENLNKSPNFKAKFEDLQMDLLGEVFKIVKHMPQRWLNLTRTLERIIRLWHVLTKLYSDECKNFPLEEGDNKNAILQLYSLLQPLSSIARDGQYDGATMMADIFMKFGKLNIEVLDPSKDL 486
W W FCHLMVKAAE FG H+ P K KNP ARD+L+K++ +V L++S NFKAKF+DLQ+D+LGEV KI P+RWL L RTLER+IRLWHVL KLYSD K FPLEEGDNK+ ILQLYSLLQP SS+ RDGQY GA M+ADI+MK G L + VLDPS++L
Sbjct: 125 WNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKKLINLVGTLHRSSNFKAKFDDLQVDVLGEVLKIPNQAPKRWLTLVRTLERVIRLWHVLRKLYSDTGKTFPLEEGDNKDCILQLYSLLQPPSSVTRDGQYGGAPMLADIYMKCGMLKMRVLDPSEEL 286
BLAST of mRNA_H-elongata_contig108737.708.1 vs. uniprot
Match: A0A6H5KS21_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS21_9PHAE) HSP 1 Score: 212 bits (540), Expect = 1.360e-64 Identity = 103/151 (68.21%), Postives = 116/151 (76.82%), Query Frame = 1
Query: 1 WCWYFCHLMVKAAEQAFGIHLHPTKPKNPAARDLLRKVVKVVENLNKSPNFKAKFEDLQMDLLGEVFKIVKHMPQRWLNLTRTLERIIRLWHVLTKLYSDECKNFPLEEGDNKNAILQLYSLLQPLSSIARDGQYDGATMMADIFMKFGKL 453
W W CHLMVKAAE AFG H P K KNP R +L+ V+ +V L+KSPN AKFED+Q+DLLGE+ KI PQRWL L RTLER+IRLWHVL KL+SD K FPLEEGDNK+ ILQLYSLLQPLSS+ RDGQY G MMADI+MKFG L
Sbjct: 271 WNWCCCHLMVKAAEDAFGTHPDPQKSKNPEGRKMLKNVIGMVGTLHKSPNLTAKFEDVQVDLLGEILKIPNQAPQRWLTLVRTLERVIRLWHVLRKLHSDAGKTFPLEEGDNKDCILQLYSLLQPLSSVTRDGQYGGVPMMADIYMKFGML 421
BLAST of mRNA_H-elongata_contig108737.708.1 vs. uniprot
Match: A0A6H5KFQ8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ8_9PHAE) HSP 1 Score: 211 bits (536), Expect = 4.170e-63 Identity = 101/147 (68.71%), Postives = 120/147 (81.63%), Query Frame = 1
Query: 46 AFGIHLHPTKPKNPAARDLLRKVVKVVENLNKSPNFKAKFEDLQMDLLGEVFKIVKHMPQRWLNLTRTLERIIRLWHVLTKLYSDECKNFPLEEGDNKNAILQLYSLLQPLSSIARDGQYDGATMMADIFMKFGKLNIEVLDPSKDL 486
AFG+H PTK KNP ARD+++ V+KVVENLNKS N +AKFEDL+ +LLGEV K+VKH PQRWL++ RT+ERIIRLWH L KLYSDE K FPLEEGDNKN +LQLYSLL+PL I RDGQY GA MMADI+MK G L + +L+ K+L
Sbjct: 28 AFGVHPDPTKSKNPGARDVIKVVIKVVENLNKSSNLRAKFEDLETELLGEVLKVVKHAPQRWLSMVRTMERIIRLWHALRKLYSDEGKVFPLEEGDNKNGVLQLYSLLEPLCMITRDGQYGGAPMMADIYMKMGILKMGMLNLEKEL 174
BLAST of mRNA_H-elongata_contig108737.708.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 210 bits (534), Expect = 5.990e-62 Identity = 103/162 (63.58%), Postives = 122/162 (75.31%), Query Frame = 1
Query: 1 WCWYFCHLMVKAAEQAFGIHLHPTKPKNPAARDLLRKVVKVVENLNKSPNFKAKFEDLQMDLLGEVFKIVKHMPQRWLNLTRTLERIIRLWHVLTKLYSDECKNFPLEEGDNKNAILQLYSLLQPLSSIARDGQYDGATMMADIFMKFGKLNIEVLDPSKDL 486
W W +CHLM+KAAE AFG H P K KNP A ++L+ ++ +V L+KS N AKFEDLQ+DLLGEV KI PQRWL L RT+ER+IRLWHVL KLYSD KNF LEEGDNK+ I QLYSLLQ LSS+ RDGQY G M+ADI++KFG L + VL+ S DL
Sbjct: 114 WNWCYCHLMIKAAEDAFGTHPDPQKSKNPEAHNMLKNLIGIVGTLHKSLNLTAKFEDLQVDLLGEVLKIPNQAPQRWLTLVRTMERVIRLWHVLRKLYSDAGKNFILEEGDNKDCIPQLYSLLQSLSSVTRDGQYGGLPMLADIYIKFGMLKMGVLNSSADL 275
BLAST of mRNA_H-elongata_contig108737.708.1 vs. uniprot
Match: A0A6H5JZ66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ66_9PHAE) HSP 1 Score: 206 bits (523), Expect = 1.430e-61 Identity = 102/162 (62.96%), Postives = 121/162 (74.69%), Query Frame = 1
Query: 1 WCWYFCHLMVKAAEQAFGIHLHPTKPKNPAARDLLRKVVKVVENLNKSPNFKAKFEDLQMDLLGEVFKIVKHMPQRWLNLTRTLERIIRLWHVLTKLYSDECKNFPLEEGDNKNAILQLYSLLQPLSSIARDGQYDGATMMADIFMKFGKLNIEVLDPSKDL 486
W W +CHLMVKAAE AFG P KNP AR++L+ ++ ++ L+KS N AKFEDLQ+DLLGEV I PQRWL L RT+ER+IRLW V+ KLYSD KNFPLEEGDNK+ I QLYSLLQPLSS+ RDGQY G M+ADI+MKFG L + VL+ S DL
Sbjct: 106 WNWCYCHLMVKAAEDAFGTRPDPQMSKNPEARNMLKNLIGIIGTLHKS-NLTAKFEDLQVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLYSDAGKNFPLEEGDNKDCINQLYSLLQPLSSVTRDGQYGGLPMLADIYMKFGMLKMGVLNSSADL 266
BLAST of mRNA_H-elongata_contig108737.708.1 vs. uniprot
Match: A0A6H5K0P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0P1_9PHAE) HSP 1 Score: 206 bits (523), Expect = 4.910e-60 Identity = 102/162 (62.96%), Postives = 121/162 (74.69%), Query Frame = 1
Query: 1 WCWYFCHLMVKAAEQAFGIHLHPTKPKNPAARDLLRKVVKVVENLNKSPNFKAKFEDLQMDLLGEVFKIVKHMPQRWLNLTRTLERIIRLWHVLTKLYSDECKNFPLEEGDNKNAILQLYSLLQPLSSIARDGQYDGATMMADIFMKFGKLNIEVLDPSKDL 486
W W +CHLMVKAAE AFG P KNP AR++L+ ++ ++ L+KS N AKFEDLQ+DLLGEV I PQRWL L RT+ER+IRLW V+ KLYSD KNFPLEEGDNK+ I QLYSLLQPLSS+ RDGQY G M+ADI+MKFG L + VL+ S DL
Sbjct: 235 WNWCYCHLMVKAAEDAFGTRPDPQMSKNPEARNMLKNLIGIIGTLHKS-NLTAKFEDLQVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLYSDAGKNFPLEEGDNKDCINQLYSLLQPLSSVTRDGQYGGLPMLADIYMKFGMLKMGVLNSSADL 395
BLAST of mRNA_H-elongata_contig108737.708.1 vs. uniprot
Match: A0A6H5JTT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT2_9PHAE) HSP 1 Score: 181 bits (460), Expect = 2.670e-53 Identity = 97/162 (59.88%), Postives = 113/162 (69.75%), Query Frame = 1
Query: 1 WCWYFCHLMVKAAEQAFGIHLHPTKPKNPAARDLLRKVVKVVENLNKSPNFKAKFEDLQMDLLGEVFKIVKHMPQRWLNLTRTLERIIRLWHVLTKLYSDECKNFPLEEGDNKNAILQLYSLLQPLSSIARDGQYDGATMMADIFMKFGKLNIEVLDPSKDL 486
W F HLMVKAAE FG H+ P K KNP ARD+L+K++ +V L++S NFKAKF DLQ+D+ GEVF PQRWL L TLER+IRLWHVL KLYSD K FPLEEGD + ILQL SLLQPLSS+ RDGQY GA M L + VLDPS++L
Sbjct: 82 WNCCFYHLMVKAAEDGFGTHVDPQKSKNPKARDMLKKLINLVGTLHRSSNFKAKFGDLQVDVWGEVFP--NQAPQRWLTLVPTLERVIRLWHVLRKLYSDTGKTFPLEEGDITDCILQLNSLLQPLSSVTRDGQYGGAPM----------LKMRVLDPSEEL 231
BLAST of mRNA_H-elongata_contig108737.708.1 vs. uniprot
Match: A0A6H5L1G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G0_9PHAE) HSP 1 Score: 182 bits (462), Expect = 1.130e-50 Identity = 88/162 (54.32%), Postives = 115/162 (70.99%), Query Frame = 1
Query: 1 WCWYFCHLMVKAAEQAFGIHLHPTKPKNPAARDLLRKVVKVVENLNKSPNFKAKFEDLQMDLLGEVFKIVKHMPQRWLNLTRTLERIIRLWHVLTKLYSDECKNFPLEEGDNKNAILQLYSLLQPLSSIARDGQYDGATMMADIFMKFGKLNIEVLDPSKDL 486
W W CHL +AAEQAFG P KPKN AR +++ V+K +N+SP FK KF++ Q+ + GEV KI KH PQRWL+L R +ERIIRLWHVL K+Y+++ FPL++GDNK+ ILQLYSLL+PL++I RDGQY M A++ M F +L E LDP+ L
Sbjct: 341 WDWCVCHLADRAAEQAFGTSADPQKPKNKDARGVVQLVIKAAAKVNQSPIFKQKFDEAQLQMTGEVLKIRKHAPQRWLSLVRVMERIIRLWHVLRKVYANDGVEFPLDKGDNKDNILQLYSLLRPLAAITRDGQYGAVPMSAEMHMAFAELKQEGLDPTGPL 502 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig108737.708.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig108737.708.1 >prot_H-elongata_contig108737.708.1 ID=prot_H-elongata_contig108737.708.1|Name=mRNA_H-elongata_contig108737.708.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=154bp MVKAAEQAFGIHLHPTKPKNPAARDLLRKVVKVVENLNKSPNFKAKFEDLback to top mRNA from alignment at H-elongata_contig108737:1548..2033- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig108737.708.1 ID=mRNA_H-elongata_contig108737.708.1|Name=mRNA_H-elongata_contig108737.708.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=486bp|location=Sequence derived from alignment at H-elongata_contig108737:1548..2033- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig108737:1548..2033- >mRNA_H-elongata_contig108737.708.1 ID=mRNA_H-elongata_contig108737.708.1|Name=mRNA_H-elongata_contig108737.708.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=924bp|location=Sequence derived from alignment at H-elongata_contig108737:1548..2033- (Himanthalia elongata Himel1 dioecious)back to top |