prot_H-elongata_contig10867.705.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10867.705.1
Unique Nameprot_H-elongata_contig10867.705.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length220
Homology
BLAST of mRNA_H-elongata_contig10867.705.1 vs. uniprot
Match: A0A6H5JUS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS2_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 1.870e-55
Identity = 101/203 (49.75%), Postives = 132/203 (65.02%), Query Frame = 0
Query:   10 LFYSMDEVKGHNCAEIRALSKPVLKIEAKNFFKAARRVTADAAQGLQRDAFLTEEANVMLTSNLWAEGGLVNGMQEKVGDIVWTPGEETPALSNFVVIRFNGYTDPAWSGNPRYGGCVPIAAVETSWSATGDGGKQESREQLLFALFWAITMHKSQGQTVDKAVVDLRKSEVTAGLTFVRLSRAKRLVDLLVDHVPFDRLSKL 212
            LFYS  EV  +N  ++R L  PV ++ A +    ARR TAD A+GL+RD +L + A VML+ NL+ + GLVNG++ +V ++V       P L  +VV++F GY+   WS   RY  CVPI+ V+T+W    DGG Q  R QL   L WAITMHKSQGQT+ KAV+DL   E   GLTFV LSRAKRLVDL+V+ + FDR+  L
Sbjct:   52 LFYSKKEVNKYNGKKLRELDNPVARVSAVHTGANARRATADTAEGLERDLYLAKGAKVMLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQ---DGGTQV-RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNL 250          
BLAST of mRNA_H-elongata_contig10867.705.1 vs. uniprot
Match: A0A6H5L976_9PHAE (ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L976_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 9.150e-55
Identity = 106/212 (50.00%), Postives = 139/212 (65.57%), Query Frame = 0
Query:    1 RRSFNDATRLFYSMDEVKGHNCAEIRALSKPVLKIEAKNFFKAARRVTADAAQGLQRDAFLTEEANVMLTSNLWAEGGLVNGMQEKVGDIVWTPGEETPALSNFVVIRFNGYTDPAWSGNPRYGGCVPIAAVETSWSATGDGGKQESREQLLFALFWAITMHKSQGQTVDKAVVDLRKSEVTAGLTFVRLSRAKRLVDLLVDHVPFDRLSKL 212
            + +F DATRLFYS  EV  +N  ++R L  PV ++ A +    ARR TAD A+GL+RD +L + A VML+ NL+ + GLVNG++ +V ++V       P L  +VV++F GY+   WS   RY  CVPI+ V+T+W    DGG Q  R QL   L WAITMHKSQGQT+ KAV+DL   E   GLTFV LSRAKRLVDL+V+ + FDR+  L
Sbjct: 1348 KAAFEDATRLFYSKKEVNKYNGKKLRELDNPVARVSAVHTGANARRATADTAEGLERDLYLAKGAKVMLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQ---DGGTQV-RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNL 1555          
BLAST of mRNA_H-elongata_contig10867.705.1 vs. uniprot
Match: A0A6H5JFG8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG8_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 3.940e-43
Identity = 84/163 (51.53%), Postives = 109/163 (66.87%), Query Frame = 0
Query:   50 DAAQGLQRDAFLTEEANVMLTSNLWAEGGLVNGMQEKVGDIVWTPGEETPALSNFVVIRFNGYTDPAWSGNPRYGGCVPIAAVETSWSATGDGGKQESREQLLFALFWAITMHKSQGQTVDKAVVDLRKSEVTAGLTFVRLSRAKRLVDLLVDHVPFDRLSKL 212
            D A+GL+RD +L + A VML+ NL+ + GLVNG++ +V ++V       P L  +VV++F GY+   WS   RY  CVPI+ V+T+W    DGG Q  R QL   L WAITMHKSQGQT+ KAV+DL   E   GLTFV LSRAKRLVDL+V+ + FDR+  L
Sbjct:  266 DTAEGLERDLYLAKGAKVMLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQ---DGGTQV-RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNL 424          
BLAST of mRNA_H-elongata_contig10867.705.1 vs. uniprot
Match: UPI00106B9E63 (uncharacterized protein LOC114530406 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106B9E63)

HSP 1 Score: 150 bits (380), Expect = 3.020e-41
Identity = 77/214 (35.98%), Postives = 125/214 (58.41%), Query Frame = 0
Query:    2 RSFNDATRLFYSMDEVKGHNCAEIRALSKPVLKIEAKNFFKAARRVTADAAQGLQRDAFLTEEANVMLTSNLWAEGGLVNGMQEKVGDIVWTPGEETPALSNFVVIRFNGYTDPAWSGNPRYGGCVPIAAVETSWSATGDGGKQESREQLLFALFWAITMHKSQGQTVDKAVVDLRKSEVTAGLTFVRLSRAKRLVDLLVDHVPFDRLSKLREN 215
            + F  + RLFYS +EV   N   +  L +P+ +I A++    A+ + +    GLQ    + ++A VMLT NLW   GL NG+   + DI++   +E P L   VV++F+ Y  P++S  P    CVPI+ +  S +          R+QL   L WA+T+HKSQG T+DK  VD+ K E + G+++V LSR ++L  ++++ +PFDRLS ++++
Sbjct:   56 QEFQHSIRLFYSNEEVAKFNYEHLLDLKQPIAQINARHSTNKAKVINSQDMYGLQPTLLIAKKARVMLTMNLWPSAGLCNGVTGYIEDIIYAQSQEPPLLPTAVVVKFDNYIGPSFSTTPC---CVPISPITVSVNLNN---VIHERQQLPLTLAWALTIHKSQGMTIDKLWVDIGKKEHSLGMSYVALSRVRKLSSMVIEPMPFDRLSSIKKS 263          
BLAST of mRNA_H-elongata_contig10867.705.1 vs. uniprot
Match: UPI00106C62E8 (ATP-dependent DNA helicase PIF6-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C62E8)

HSP 1 Score: 145 bits (366), Expect = 2.600e-39
Identity = 83/212 (39.15%), Postives = 125/212 (58.96%), Query Frame = 0
Query:    4 FNDATRLFYSMDEVKGHNCAEIRALSKPVLKIEAKNFFKAARRVTADAAQGLQRDAFLTEEANVMLTSNLWAEGGLVNGMQEKVGDIVWTPGEETPALSNFVVIRFNGYTDPAWSGNPRYGGCVPIAAVETSWSATGDGGKQESREQLLFALFWAITMHKSQGQTVDKAVVDLRKSEVTAGLTFVRLSRAKRLVDLLVDHVPFDRLSKLREN 215
            F DATRLFYS ++V  +N  ++  L  P+  I A++    A++++AD   GL+  AFL + A VMLT NLW+  GL NG    V DIV+    + P L   V+I F  Y  PA+  N     CVPI  +  S  +  + G  E  +QL   L WA+T+HKSQG T+ KA +D+ K+E TAG+++V +SR K L   +++ + ++RL+ L+ +
Sbjct:   42 FADATRLFYSNEQVANYNSEQLTKLEHPIAHINARHSSAFAKKLSADDMSGLEPVAFLAKGARVMLTMNLWSSVGLCNGATGIVVDIVYQNNHQPPDLPIVVIIEFENYRGPAF--NVDKPSCVPICPITVS--SQSETGFHEL-QQLPLRLAWALTIHKSQGLTLPKAWIDIGKTERTAGVSYVAISRVKLLSSCVIEPMTYERLTSLKSS 248          
BLAST of mRNA_H-elongata_contig10867.705.1 vs. uniprot
Match: A0A7D9EBM6_PARCT (Uncharacterized protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9EBM6_PARCT)

HSP 1 Score: 145 bits (366), Expect = 3.890e-39
Identity = 79/212 (37.26%), Postives = 124/212 (58.49%), Query Frame = 0
Query:    4 FNDATRLFYSMDEVKGHNCAEIRALSKPVLKIEAKNFFKAARRVTADAAQGLQRDAFLTEEANVMLTSNLWAEGGLVNGMQEKVGDIVWTPGEETPALSNFVVIRFNGYTDPAWSGNPRYGGCVPIAAVETSWSATGDGGKQESREQLLFALFWAITMHKSQGQTVDKAVVDLRKSEVTAGLTFVRLSRAKRLVDLLVDHVPFDRLSKLREN 215
            F DATRLFYS ++V  +N  ++  L  P+  I A++    A++++ D   GL+   FL + A VMLT NLW+  GL NG    V DI++    + P L   +++ F+ Y  P +  N     CVPI  +  S S T  G  +  R+QL   L WA+++HKSQG T+ K  +D+ KSE TAG+++V +SRAK L   +++ + ++RL+ L+ +
Sbjct:   54 FEDATRLFYSNEQVANYNHEQLIKLEHPIAHINARHSSALAKKISPDDMSGLEPVVFLAKGARVMLTMNLWSSVGLCNGATGTVVDIIYQNNHQPPDLPVAIIVEFDNYRGPVFDDNKP--SCVPICPITVS-SQTEIGFHE--RQQLPLRLAWALSIHKSQGLTLPKVWIDIGKSERTAGVSYVAISRAKTLASCVIEPMTYERLTSLKSS 260          
BLAST of mRNA_H-elongata_contig10867.705.1 vs. uniprot
Match: A0A7D9HJE5_PARCT (Uncharacterized protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HJE5_PARCT)

HSP 1 Score: 145 bits (365), Expect = 4.060e-39
Identity = 78/212 (36.79%), Postives = 125/212 (58.96%), Query Frame = 0
Query:    4 FNDATRLFYSMDEVKGHNCAEIRALSKPVLKIEAKNFFKAARRVTADAAQGLQRDAFLTEEANVMLTSNLWAEGGLVNGMQEKVGDIVWTPGEETPALSNFVVIRFNGYTDPAWSGNPRYGGCVPIAAVETSWSATGDGGKQESREQLLFALFWAITMHKSQGQTVDKAVVDLRKSEVTAGLTFVRLSRAKRLVDLLVDHVPFDRLSKLREN 215
            F D+TRLFYS ++V  +N  ++  L  P+  I A++    A+++++D   GL+   FL + A VMLT NLW+  GL NG    V DI++    + P L   V++ F  Y  P ++ N     C+PI  +  + S T  G  +  R+QL   L WA+T+HKSQG T+ KA +D+ KSE TAG+++V +SR K L   +++ + ++RL+ L+ +
Sbjct:   42 FEDSTRLFYSNEQVGNYNHEQLTKLEHPIAHINARHSSALAKKISSDDMSGLEPVVFLAKGARVMLTMNLWSSVGLCNGATGTVVDIIYQNNHQPPDLPIAVIVEFENYRGPVFNENQPL--CIPIIPITVA-SQTEIGFHE--RQQLPLRLAWALTIHKSQGLTLPKAWIDIGKSERTAGVSYVAISRVKSLASCVIEPMTYERLTSLKSS 248          
BLAST of mRNA_H-elongata_contig10867.705.1 vs. uniprot
Match: UPI00106C2519 (ATP-dependent DNA helicase PIF1-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C2519)

HSP 1 Score: 147 bits (370), Expect = 4.480e-39
Identity = 82/212 (38.68%), Postives = 123/212 (58.02%), Query Frame = 0
Query:    4 FNDATRLFYSMDEVKGHNCAEIRALSKPVLKIEAKNFFKAARRVTADAAQGLQRDAFLTEEANVMLTSNLWAEGGLVNGMQEKVGDIVWTPGEETPALSNFVVIRFNGYTDPAWSGNPRYGGCVPIAAVETSWSATGDGGKQESREQLLFALFWAITMHKSQGQTVDKAVVDLRKSEVTAGLTFVRLSRAKRLVDLLVDHVPFDRLSKLREN 215
            F DATRLFYS ++V  +N  ++  L  P   I A +    A++++ D   GL+   FL + A VMLT NLW+  GL NG    V DIV+    + P L   V++ F  Y  PA++ N     CVPI  +  S  +  + G  E R+QL   L WA+T+HKSQG T+ KA +D+ KSE TAG+++V +SR + L   +++ + F+RL+ L+ +
Sbjct:  123 FQDATRLFYSNEQVANYNNEQLTKLEHPTAHINAHHSSALAKKMSPDDMSGLEPVVFLAKRARVMLTMNLWSSVGLCNGATGTVVDIVYQNNHQPPDLPIAVIVDFENYRGPAFNVNKP--SCVPICPITVS--SQSESGFHE-RQQLPLRLAWALTIHKSQGLTLPKAWIDIGKSEKTAGVSYVAISRVRSLSSCVIEPMTFERLTSLKSS 329          
BLAST of mRNA_H-elongata_contig10867.705.1 vs. uniprot
Match: A0A6S7LPR6_PARCT (Uncharacterized protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7LPR6_PARCT)

HSP 1 Score: 146 bits (368), Expect = 5.690e-39
Identity = 80/212 (37.74%), Postives = 126/212 (59.43%), Query Frame = 0
Query:    4 FNDATRLFYSMDEVKGHNCAEIRALSKPVLKIEAKNFFKAARRVTADAAQGLQRDAFLTEEANVMLTSNLWAEGGLVNGMQEKVGDIVWTPGEETPALSNFVVIRFNGYTDPAWSGNPRYGGCVPIAAVETSWSATGDGGKQESREQLLFALFWAITMHKSQGQTVDKAVVDLRKSEVTAGLTFVRLSRAKRLVDLLVDHVPFDRLSKLREN 215
            F DATRLFYS ++V  +N  ++  L +PV  I A++    A+++ ++   GL+   FL + A VMLT NLW+  GL NG    V D ++      P L   VV++F+ Y  P++        CVPI  +  S S +G+G  +  R+QL   L WA+T+HKSQG T+ KA +D+ KSE TAG+++V +SR K L   +++ + ++RL+ L+ +
Sbjct:   95 FEDATRLFYSNEQVANYNHDQLSKLEQPVAHINARHSSAIAKKIASEDMSGLEPVVFLAKGAKVMLTMNLWSNVGLCNGATGTVIDFIFESNHRPPDLPVGVVVQFDNYRGPSFDDTQP--SCVPICPITVS-SQSGNGFHE--RQQLPLRLAWALTIHKSQGLTLSKAWIDIGKSERTAGVSYVAISRVKTLSSCVIEPMTYERLTSLKSS 301          
BLAST of mRNA_H-elongata_contig10867.705.1 vs. uniprot
Match: A0A6S7LS63_PARCT (Uncharacterized protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7LS63_PARCT)

HSP 1 Score: 142 bits (359), Expect = 1.630e-38
Identity = 78/212 (36.79%), Postives = 125/212 (58.96%), Query Frame = 0
Query:    4 FNDATRLFYSMDEVKGHNCAEIRALSKPVLKIEAKNFFKAARRVTADAAQGLQRDAFLTEEANVMLTSNLWAEGGLVNGMQEKVGDIVWTPGEETPALSNFVVIRFNGYTDPAWSGNPRYGGCVPIAAVETSWSATGDGGKQESREQLLFALFWAITMHKSQGQTVDKAVVDLRKSEVTAGLTFVRLSRAKRLVDLLVDHVPFDRLSKLREN 215
            F D+TRLFYS ++V  +N  ++  L  P+  I A++    A+++++D   GL+   FL + A VMLT NLW+  GL NG    V DI++    + P L   V++ F  Y  P ++ +     C+PI  + T  S T  G  +  R+QL   L WA+T+HKSQG T+ KA +D+ KSE TAG+++V +SR K L   +++ + ++RL+ L+ +
Sbjct:   16 FEDSTRLFYSNEQVGNYNHEQLTKLEHPIAHINARHSSALAKKISSDDMSGLEPVVFLAKGARVMLTMNLWSSVGLCNGATGTVVDIIYQNNHQPPDLPIAVIVEFENYRGPVFNESRPL--CIPIYPI-TVTSQTEIGFHE--RQQLPLRLAWALTIHKSQGLTLPKAWIDIGKSERTAGVSYVAISRVKSLASCVIEPMTYERLTSLKSS 222          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10867.705.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUS2_9PHAE1.870e-5549.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L976_9PHAE9.150e-5550.00ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. ... [more]
A0A6H5JFG8_9PHAE3.940e-4351.53Reverse transcriptase domain-containing protein n=... [more]
UPI00106B9E633.020e-4135.98uncharacterized protein LOC114530406 n=1 Tax=Dendr... [more]
UPI00106C62E82.600e-3939.15ATP-dependent DNA helicase PIF6-like n=1 Tax=Dendr... [more]
A0A7D9EBM6_PARCT3.890e-3937.26Uncharacterized protein (Fragment) n=1 Tax=Paramur... [more]
A0A7D9HJE5_PARCT4.060e-3936.79Uncharacterized protein (Fragment) n=1 Tax=Paramur... [more]
UPI00106C25194.480e-3938.68ATP-dependent DNA helicase PIF1-like n=1 Tax=Dendr... [more]
A0A6S7LPR6_PARCT5.690e-3937.74Uncharacterized protein (Fragment) n=1 Tax=Paramur... [more]
A0A6S7LS63_PARCT1.630e-3836.79Uncharacterized protein (Fragment) n=1 Tax=Paramur... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 137..212
e-value: 6.5E-6
score: 28.0
NoneNo IPR availablePANTHERPTHR23274:SF32ATP-DEPENDENT DNA HELICASE PIF1coord: 2..201
NoneNo IPR availablePANTHERPTHR23274DNA HELICASE-RELATEDcoord: 2..201
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 57..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10867contigH-elongata_contig10867:509..1168 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10867.705.1mRNA_H-elongata_contig10867.705.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10867 509..1168 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10867.705.1 ID=prot_H-elongata_contig10867.705.1|Name=mRNA_H-elongata_contig10867.705.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=220bp
RRSFNDATRLFYSMDEVKGHNCAEIRALSKPVLKIEAKNFFKAARRVTAD
AAQGLQRDAFLTEEANVMLTSNLWAEGGLVNGMQEKVGDIVWTPGEETPA
LSNFVVIRFNGYTDPAWSGNPRYGGCVPIAAVETSWSATGDGGKQESREQ
LLFALFWAITMHKSQGQTVDKAVVDLRKSEVTAGLTFVRLSRAKRLVDLL
VDHVPFDRLSKLRENIFEA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase