prot_H-elongata_contig108630.701.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig108630.701.1
Unique Nameprot_H-elongata_contig108630.701.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length115
Homology
BLAST of mRNA_H-elongata_contig108630.701.1 vs. uniprot
Match: D7FSV0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSV0_ECTSI)

HSP 1 Score: 229 bits (583), Expect = 1.160e-68
Identity = 109/114 (95.61%), Postives = 110/114 (96.49%), Query Frame = 0
Query:    1 PPSFQTRALVRYRDLPDRSRSFVVFVSHAWMRPHTTPSFAHPDTSSRGGEKYRLIAEAGDRIRAHLPPDVRVLLWIDYSCVDQDSTRRSKATMRGMREYMRRCDAILTVYPGEA 114
            P S   RALVRYRDLPDRSRSFVVFVSHAWMRPHTTPSFAHPDTSSRGGEKYRLIAEAGDRIRAHLPPDVRVLLWIDYSCVDQDSTRRSKATMRGMREYMRRCDAILTVYPG+A
Sbjct:  510 PRSSDRRALVRYRDLPDRSRSFVVFVSHAWMRPHTTPSFAHPDTSSRGGEKYRLIAEAGDRIRAHLPPDVRVLLWIDYSCVDQDSTRRSKATMRGMREYMRRCDAILTVYPGDA 623          
BLAST of mRNA_H-elongata_contig108630.701.1 vs. uniprot
Match: A0A7S2IEM7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IEM7_9EUKA)

HSP 1 Score: 68.6 bits (166), Expect = 2.260e-11
Identity = 38/100 (38.00%), Postives = 58/100 (58.00%), Query Frame = 0
Query:   12 YRDLPDRSRSFVVFVSHAWMRPHTTPSFAHPDTSSRGGEKYRLIAEAGDRIRAHLPP---DVRVLLWIDYSCVDQDSTRRSKATMRGMREYMRRCDAILT 108
            Y D  DRS +  +FVSH W+RP   P+  HPD      +K++LI EA +R+R    P    +++ LW+D++C+DQDS+   +   R M   +  CD +LT
Sbjct:   68 YEDF-DRSTTAFIFVSHRWLRPRQGPA-GHPDDFDH--QKHKLIVEACERLRGPRAPIAEHMQIALWVDFACLDQDSSPAQELEER-MTTLIGVCDLLLT 162          
BLAST of mRNA_H-elongata_contig108630.701.1 vs. uniprot
Match: A0A7S1DLE0_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DLE0_HEMAN)

HSP 1 Score: 58.2 bits (139), Expect = 1.650e-7
Identity = 31/92 (33.70%), Postives = 51/92 (55.43%), Query Frame = 0
Query:   20 RSFVVFVSHAWMRPHTTPSFAHPDTSSRGGEKYRLIAEAGDRI--RAHLPPDV-RVLLWIDYSCVDQDSTRRSKATMRGMREYMRRCDAILT 108
            R F +FVSH W++P       HPD  + G  KY+L+ +  + +  R  +P D  +++LWIDY+C++QD+   +      M   +  CD +LT
Sbjct:   89 RLFRIFVSHRWLQPEKP----HPD--AEGNPKYKLLLKCIEDMQERGWIPSDDDKIVLWIDYACINQDAKDPAAELNDNMLRIVGMCDMVLT 174          
BLAST of mRNA_H-elongata_contig108630.701.1 vs. uniprot
Match: A0A7S0U0U2_HEMAN (Hypothetical protein (Fragment) n=3 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U0U2_HEMAN)

HSP 1 Score: 57.4 bits (137), Expect = 3.240e-7
Identity = 32/92 (34.78%), Postives = 51/92 (55.43%), Query Frame = 0
Query:   20 RSFVVFVSHAWMRPHTTPSFAHPDTSSRGGEKYRLIAEAGDRI--RAHLPPDV-RVLLWIDYSCVDQDSTRRSKATMRGMREYMRRCDAILT 108
            R F +FVSH W++P       HPD +  G  KY+LI +  + +  R  +P D  +++LWIDY+C++QD+   +      M   +  CD +LT
Sbjct:  117 RLFRIFVSHRWLQPEKP----HPDAN--GHPKYQLILKCIEDMQKRGWVPSDDDKIVLWIDYACINQDAKDPAAELNDNMLRIVGMCDMVLT 202          
BLAST of mRNA_H-elongata_contig108630.701.1 vs. uniprot
Match: A0A7S3V685_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V685_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 8.050e-7
Identity = 31/102 (30.39%), Postives = 54/102 (52.94%), Query Frame = 0
Query:    9 LVRYRDLP--DRSRSFVVFVSHAWMRPHTTPSFAHPDTSSRGGEKYRLIAEAGDRIRAHLPPDVRVLLWIDYSCVDQDSTRRSKATMRGMREYMRRCDAILT 108
            LVRYRDL   DR+++ +VF+SH W+   +      PD+      K+++     D ++      VR+L+W+DYSC++Q       + +  +  Y+ R   IL+
Sbjct:   78 LVRYRDLEEVDRAQTMIVFISHRWLNTDSDK----PDSDDNF--KFKITKLGLDMLKRQSGGGVRMLVWLDYSCMNQLDRLLMASGIASLPAYVERSSVILS 173          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig108630.701.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FSV0_ECTSI1.160e-6895.61Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2IEM7_9EUKA2.260e-1138.00Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A7S1DLE0_HEMAN1.650e-733.70Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A7S0U0U2_HEMAN3.240e-734.78Hypothetical protein (Fragment) n=3 Tax=Hemiselmis... [more]
A0A7S3V685_9STRA8.050e-730.39Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig108630contigH-elongata_contig108630:455..1383 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig108630.701.1mRNA_H-elongata_contig108630.701.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig108630 455..1383 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig108630.701.1 ID=prot_H-elongata_contig108630.701.1|Name=mRNA_H-elongata_contig108630.701.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=115bp
PPSFQTRALVRYRDLPDRSRSFVVFVSHAWMRPHTTPSFAHPDTSSRGGE
KYRLIAEAGDRIRAHLPPDVRVLLWIDYSCVDQDSTRRSKATMRGMREYM
RRCDAILTVYPGEA*
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