prot_H-elongata_contig108376.683.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig108376.683.1
Unique Nameprot_H-elongata_contig108376.683.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length196
Homology
BLAST of mRNA_H-elongata_contig108376.683.1 vs. uniprot
Match: D7FN88_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN88_ECTSI)

HSP 1 Score: 230 bits (587), Expect = 1.510e-66
Identity = 118/183 (64.48%), Postives = 132/183 (72.13%), Query Frame = 0
Query:    1 YVQAILSFSGVYFDASVFRVLRLFRVLQLEHFVSAFTLLDDVWFSCKDTLAATGLLALVVWVGSACLFYLFEKVWHELSRSISNLSRVHIYLAPTSAVSSKHAPNIYFDNECTDAAFSSIPDAMYYVAIFLGGEWSKVDFTWPGKILCCVLCVMGIALFAIPVGTVFEAFQDVLQEVNASDDE 183
            Y++ IL  +GVYFDASVFRVLRLFR+LQLEHFVSAF+LLDDVW + KDTLAATGLLALVVWVGSA LFYLFEK                                   DN CT  AFSSIPDAM+Y A+FLGGEWS++DFTW GK+LCCVLCV GI LF IPVGTVFEAFQDV+QEVN  ++E
Sbjct: 1036 YIETILWSAGVYFDASVFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSAFLFYLFEK-----------------------------------DNMCTGEAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVNEEEEE 1183          
BLAST of mRNA_H-elongata_contig108376.683.1 vs. uniprot
Match: A0A836CDK7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDK7_9STRA)

HSP 1 Score: 171 bits (432), Expect = 1.250e-45
Identity = 94/188 (50.00%), Postives = 111/188 (59.04%), Query Frame = 0
Query:    1 YVQAILSFSGVYFDASVFRVLRLFRVLQLEHFVSAFTLLDDVWFSCKDTLAATGLLALVVWVGSACLFYLFEKVWHELSRSISNLSRVHIYLAPTSAVSSKHAPNIYFDNECTDA--AFSSIPDAMYYVAIFLGGEWSKVDFTWPGKILCCVLCVMGIALFAIPVGTVFEAFQDVLQEVNASDDESLE 186
            Y+Q IL  +GV FDA  FR+LRLFR+LQLE  V+AFTLLDDVW   K  L A GLLA +VWVGSA LF+L E+                                    NEC     AF  IP +MYY  IFLGGEW  +DFT  G+I+CC  C+MGIALFAIPVGTVFE+F  VL+E N+ D +  E
Sbjct: 1044 YIQEILVSAGVVFDAGPFRILRLFRLLQLERHVNAFTLLDDVWRGAKGVLKAAGLLAFIVWVGSATLFFLTEQ-----------------------------------RNECEGVREAFVDIPSSMYYTGIFLGGEWGLIDFTGLGRIVCCFTCIMGIALFAIPVGTVFESFSGVLEEANSGDKKEAE 1196          
BLAST of mRNA_H-elongata_contig108376.683.1 vs. uniprot
Match: A0A812X110_9DINO (Shal protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812X110_9DINO)

HSP 1 Score: 163 bits (413), Expect = 4.790e-43
Identity = 83/186 (44.62%), Postives = 109/186 (58.60%), Query Frame = 0
Query:    1 YVQAILSFSGVYFDASVFRVLRLFRVLQLEHFVSAFTLLDDVWFSCKDTLAATGLLALVVWVGSACLFYLFEKVWHELSRSISNLSRVHIYLAPTSAVSSKHAPNIYFDNECTDAAFSSIPDAMYYVAIFLGGEWSKVDFTWPGKILCCVLCVMGIALFAIPVGTVFEAFQDVLQEVNASDDESLE 186
            ++Q ++  SG+ F+A VFR+ RL R+LQLE FV +FTLLDD W SC++T+ ATG +AL+VW+  A LFY FE+                                   DN   D AF  +P +MY+  IFLGGEW+ +DFT  GKI+C V CV+GI L+ IP+G VFEAF DVL +     DES E
Sbjct: 1703 WIQTVMWLSGLQFNAFVFRIARLLRILQLEDFVESFTLLDDAWRSCRETMVATGFMALLVWICGAVLFYEFEQ-----------------------------------DNPAMDGAFKDLPSSMYFTIIFLGGEWAMIDFTSGGKIVCLVYCVVGIGLYGIPIGAVFEAFSDVLADKEDEQDESAE 1853          
BLAST of mRNA_H-elongata_contig108376.683.1 vs. uniprot
Match: A0A7S0XQ15_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XQ15_HEMAN)

HSP 1 Score: 150 bits (378), Expect = 3.020e-42
Identity = 78/163 (47.85%), Postives = 100/163 (61.35%), Query Frame = 0
Query:   14 DASVFRVLRLFRVLQLEHFVSAFTLLDDVWFSCKDTLAATGLLALVVWVGSACLFYLFEKVWHELSRSISNLSRVHIYLAPTSAVSSKHAPNIYFDNECTDAAFSSIPDAMYYVAIFLGGEWSKVDFTWPGKILCCVLCVMGIALFAIPVGTVFEAFQDVLQE 176
            D +  RVLRLFR+LQLEHF  AFTL+DDV+  CKDTL AT  LA+++WVG+A  F++ EK                              PN+         AF +IP++MYY AIFL GEW +VDFT PGK++CCVL V GI L++IPVG +F+AF +VL E
Sbjct:   66 DFAAIRVLRLFRILQLEHFTEAFTLIDDVFRQCKDTLVATSFLAVIIWVGAAYAFFVTEK----------------------------GNPNV-------GGAFDNIPNSMYYTAIFLSGEWGQVDFTLPGKVICCVLVVAGIGLYSIPVGALFDAFGEVLAE 193          
BLAST of mRNA_H-elongata_contig108376.683.1 vs. uniprot
Match: A0A7S0YVY9_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YVY9_9CRYP)

HSP 1 Score: 145 bits (367), Expect = 2.310e-41
Identity = 76/158 (48.10%), Postives = 97/158 (61.39%), Query Frame = 0
Query:   19 RVLRLFRVLQLEHFVSAFTLLDDVWFSCKDTLAATGLLALVVWVGSACLFYLFEKVWHELSRSISNLSRVHIYLAPTSAVSSKHAPNIYFDNECTDAAFSSIPDAMYYVAIFLGGEWSKVDFTWPGKILCCVLCVMGIALFAIPVGTVFEAFQDVLQE 176
            RVLRL R+LQLEHF  AFTL+DDV+  CKDTL AT  LA+++WVG+A  F+L E+                              PN+         AF +IP++MYY AIFL GEW +VDFT PGK++CCVL V GI L++IPVG +F+AF +VL E
Sbjct:   13 RVLRLLRILQLEHFTEAFTLIDDVFRQCKDTLVATSFLAVIIWVGAAYAFFLTER----------------------------GNPNV-------GGAFDNIPNSMYYTAIFLSGEWGQVDFTLPGKVICCVLVVAGIGLYSIPVGALFDAFGEVLAE 135          
BLAST of mRNA_H-elongata_contig108376.683.1 vs. uniprot
Match: A0A7S2YGV7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YGV7_9STRA)

HSP 1 Score: 147 bits (372), Expect = 3.720e-41
Identity = 77/164 (46.95%), Postives = 104/164 (63.41%), Query Frame = 0
Query:   14 DASVFRVLRLFRVLQLEHFVSAFTLLDDVWFSCKDTLAATGLLALVVWVGSACLFYLFEKV---WHELSRSISNLSRVHIYLAPTSAVSSKHAPNIYFDNECTDAAFSSIPDAMYYVAIFLGGEWSKVDFTWPGKILCCVLCVMGIALFAIPVGTVFEAFQDVL 174
            +A +FR       LQLE FV AF+ LD+V+ + KD L ATGLLAL++WVG   LFY+FE+    W E   S+  L      +       S    N Y+   C+  AF  +P+A+YY A+FLGGEW  VDFTWPG+++C  LCV+GIAL+AIP+GT+F++F  VL
Sbjct:   40 NARIFRXXXXXXXLQLEDFVVAFSKLDNVFRASKDVLKATGLLALIIWVGCGALFYIFEENNPNWRECDSSVP-LHTNDTGMPGCYDFKSTAECNEYYPGLCSQNAFIHMPNALYYTAVFLGGEWGVVDFTWPGRLVCLFLCVVGIALYAIPIGTLFDSFGAVL 202          
BLAST of mRNA_H-elongata_contig108376.683.1 vs. uniprot
Match: A0A7S1DR60_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DR60_HEMAN)

HSP 1 Score: 150 bits (378), Expect = 1.930e-39
Identity = 78/163 (47.85%), Postives = 100/163 (61.35%), Query Frame = 0
Query:   14 DASVFRVLRLFRVLQLEHFVSAFTLLDDVWFSCKDTLAATGLLALVVWVGSACLFYLFEKVWHELSRSISNLSRVHIYLAPTSAVSSKHAPNIYFDNECTDAAFSSIPDAMYYVAIFLGGEWSKVDFTWPGKILCCVLCVMGIALFAIPVGTVFEAFQDVLQE 176
            D +  RVLRLFR+LQLEHF  AFTL+DDV+  CKDTL AT  LA+++WVG+A  F++ EK                              PN+         AF +IP++MYY AIFL GEW +VDFT PGK++CCVL V GI L++IPVG +F+AF +VL E
Sbjct:  362 DFAAIRVLRLFRILQLEHFTEAFTLIDDVFRQCKDTLVATSFLAVIIWVGAAYAFFVTEK----------------------------GNPNV-------GGAFDNIPNSMYYTAIFLSGEWGQVDFTLPGKVICCVLVVAGIGLYSIPVGALFDAFGEVLAE 489          
BLAST of mRNA_H-elongata_contig108376.683.1 vs. uniprot
Match: A0A7S1GK10_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GK10_CYCTE)

HSP 1 Score: 149 bits (377), Expect = 1.940e-38
Identity = 78/163 (47.85%), Postives = 106/163 (65.03%), Query Frame = 0
Query:   15 ASVFRVLRLFRVLQLEHFVSAFTLLDDVWFSCKDTLAATGLLALVVWVGSACLFYLFEKVWHELSRSISNLSRVHIYLAPTSAVSSKHAP---NIYFDNECTDAAFSSIPDAMYYVAIFLGGEWSKVDFTWPGKILCCVLCVMGIALFAIPVGTVFEAFQDVL 174
            A +FRV R+FR+LQLE F+ AF+ LD+V+ +  D L ATGLLALV+WVG   LFY+FE+  +   RS  +    H   + T      H     N  +   C   AF++IP+++YY A+FLGGEW  VDFTWPG+ +C  LCV GI L+AIP+GT+F++F  VL
Sbjct:  536 AMMFRVFRIFRLLQLEGFIVAFSKLDNVFRASMDVLKATGLLALVIWVGCGSLFYIFEQN-NPNFRSCDDSIPTHSTDSSTPGCFDFHTTEECNDVYPGMCKQVAFTNIPNSLYYTAVFLGGEWGLVDFTWPGRFVCLFLCVAGIGLYAIPLGTLFDSFGAVL 697          
BLAST of mRNA_H-elongata_contig108376.683.1 vs. uniprot
Match: A0A7S0FUX1_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0FUX1_9DINO)

HSP 1 Score: 135 bits (341), Expect = 6.190e-37
Identity = 74/171 (43.27%), Postives = 94/171 (54.97%), Query Frame = 0
Query:    1 YVQAILSFSGVYFDASVFRVLRLFRVLQLEHFVSAFTLLDDVWFSCKDTLAATGLLALVVWVGSACLFYLFEKVWHELSRSISNLSRVHIYLAPTSAVSSKHAPNIYFDNECTDAAFSSIPDAMYYVAIFLGGEWSKVDFTWPGKILCCVLCVMGIALFAIPVGTVFEAFQ 171
            ++Q  LS  G+  +  +FRV+   RVLQLE FV AFTLLDD W  C+DT+  + LLAL++W+  A LFY  E                                     NE    A  SIP A++Y AIFLGGEW+ VDFT  GK+LC   C +GIA+FAIPVG+ FEAF+
Sbjct:   42 WLQMALSLVGIQTNFFIFRVVPCLRVLQLEEFVQAFTLLDDAWAMCRDTIKTSALLALIIWLLGAVLFYELEN-----------------------------------GNEALGGALDSIPSALHYTAIFLGGEWALVDFTPLGKLLCVFYCFLGIAIFAIPVGSFFEAFE 177          
BLAST of mRNA_H-elongata_contig108376.683.1 vs. uniprot
Match: A0A7S1VPC1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VPC1_9STRA)

HSP 1 Score: 145 bits (367), Expect = 6.730e-37
Identity = 78/185 (42.16%), Postives = 113/185 (61.08%), Query Frame = 0
Query:    1 YVQAILSFSGVYFDAS----VFRVLRLFRVLQLEHFVSAFTLLDDVWFSCKDTLAATGLLALVVWVGSACLFYLFEKV---WHELSRSISNLSR----VHIYLAPTSAVSSKHAPNIYFDNECTDAAFSSIPDAMYYVAIFLGGEWSKVDFTWPGKILCCVLCVMGIALFAIPVGTVFEAFQDVL 174
            +++  L  SGV  +      VFRV      LQLE FV AF++LD+V+ + KD   ATGLLA+++WVG A LFY+FE+    W     S+   +        Y  P+++     A N  +D  C   AF++IP+A+Y+ A+FLGGEW  +DFTWPG+ +C  LCV GI L+AIP+GT+F++F  +L
Sbjct: 1075 FIEQALIHSGVISEGGDSVMVFRVXXXXXXLQLEDFVVAFSMLDNVFRASKDVFKATGLLAVIIWVGCAALFYIFEENNPNWRSCDSSVPAHTEDPDFPGCYDFPSTS-----ACNEVYDGLCEQKAFTNIPNALYFTAVFLGGEWGVIDFTWPGRFVCLFLCVAGIGLYAIPIGTLFDSFGAIL 1254          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig108376.683.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN88_ECTSI1.510e-6664.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CDK7_9STRA1.250e-4550.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A812X110_9DINO4.790e-4344.62Shal protein n=1 Tax=Symbiodinium necroappetens Ta... [more]
A0A7S0XQ15_HEMAN3.020e-4247.85Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S0YVY9_9CRYP2.310e-4148.10Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A7S2YGV7_9STRA3.720e-4146.95Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S1DR60_HEMAN1.930e-3947.85Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S1GK10_CYCTE1.940e-3847.85Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S0FUX1_9DINO6.190e-3743.27Hypothetical protein n=1 Tax=Pyrodinium bahamense ... [more]
A0A7S1VPC1_9STRA6.730e-3742.16Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 15..176
e-value: 3.0E-10
score: 39.8
IPR028325Voltage-gated potassium channelPANTHERPTHR11537VOLTAGE-GATED POTASSIUM CHANNELcoord: 10..176
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 168..196
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 146..167
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 72..145
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..71
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..49
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 5..171
NoneNo IPR availableTMHMMTMhelixcoord: 49..71
NoneNo IPR availableTMHMMTMhelixcoord: 146..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig108376contigH-elongata_contig108376:903..2047 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig108376.683.1mRNA_H-elongata_contig108376.683.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig108376 903..2047 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig108376.683.1 ID=prot_H-elongata_contig108376.683.1|Name=mRNA_H-elongata_contig108376.683.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=196bp
YVQAILSFSGVYFDASVFRVLRLFRVLQLEHFVSAFTLLDDVWFSCKDTL
AATGLLALVVWVGSACLFYLFEKVWHELSRSISNLSRVHIYLAPTSAVSS
KHAPNIYFDNECTDAAFSSIPDAMYYVAIFLGGEWSKVDFTWPGKILCCV
LCVMGIALFAIPVGTVFEAFQDVLQEVNASDDESLEHTICSGGSSN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005821Ion_trans_dom
IPR028325VG_K_chnl