mRNA_H-elongata_contig10828.674.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig10828.674.1
Unique NamemRNA_H-elongata_contig10828.674.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig10828.674.1 vs. uniprot
Match: D7FT02_ECTSI (Serine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT02_ECTSI)

HSP 1 Score: 919 bits (2376), Expect = 0.000e+0
Identity = 490/648 (75.62%), Postives = 541/648 (83.49%), Query Frame = 1 
Query:    1 MPLDIKLFRADHPGGDPDAIRESQRRRYQSPDIVDEVIDLDTQWRDCRSKIDILNKDRNCFQKEVTKAKKAGKEDPENAAKILDVAKEIKVQETKLAELGKKVAKRLPKIGNIVAKDVPTSDDEDKDNEVVSTYGPTPRGEHYMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLSQALINYGIAFLRKQKYSVLQPPYFMTKDVMAGVAQLEQFDEELYKVSGEGTDEKYLIATSEQPICAFHRGEWLQESELPLRYGGVSTCFRKEAGAHGKDTWGIFRVHQFEKVEQFCICEGDLEKSAALQDEMSKTAEEFYKSLGLSYRVVNIVSGELNNAAIKKYDLEAWFPAYEEFRELVSCSNCTDYQSRAMEIRSGQKKMGQQDKKYVHMLNSTLCATTRTISCILENYQTSTGVTVPEVLVPYMGGMTFLDYVKELPKSKREAKGSTKGGYATTKKSTPTXXXXXXXXXXL---ANGGGAAPESTSRGLPGVGD--GGSDIDSIAKKIVAKGLEIRDLKKSKPDKAALQPHVDNLLSLKAEYKSKSGKDYSPSPGVSAAAQPPKAMAPVKAGAVSVESPGVGAPSESPAVVELRAKIAAKGDEIRELKKSKPDKAALQPLIAALLDLKADYKKEAGKDYVASDA 1929
            MPLDI +FR +     PD IRESQRRR+Q  +IVDEVIDLDT+WR+ RS+ID LNKDRN +QKEVTKAKKAG EDPENAAKI +VAKE+K+ E K+ EL ++V+K LPKIGNIVA DVP S+DE+KDN+VVST+GPTP GE YMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLL+QALINYGIAFLRK+ YSVLQPPYFM+KDVMAGVAQLEQFDEELYKVSG GT+EKYLIATSEQPICAFH+GEWL ESELPLRYGGVSTCFRKEAGAHGKDTWGIFRVHQFEKVEQFCICEGDLEKSAA+Q EMSK +EEFY+SLG+SYRVVNIVSGELNNAAIKKYDLEAWFPAYEEFRELVSCSNCTDYQSR ME+RSG KKMGQ +KK+VHMLNSTLCATTRT+SCILENYQT TGVTVPEVLVP+MGG+TFLDYVKELPK KREAKG+TKGGYAT+ K  P   XXXXXXXX    ANGG A  ES++RGLPG+ +  GGS+ D+IA KI AKGLEIRDLKKSKPDKA L+PH+D LL+LK EYK K+GKDY+P P  + A                                 + AKI AKGDEIRELKKSKPDKA +QP I AL+ LK  YK E GK YVA  A
Sbjct:    1 MPLDINMFRRE-----PDLIRESQRRRFQPVEIVDEVIDLDTKWRESRSRIDFLNKDRNRYQKEVTKAKKAGGEDPENAAKIKEVAKEVKIVEAKMVELSQQVSKLLPKIGNIVADDVPVSNDEEKDNKVVSTFGPTPTGEKYMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALINYGIAFLRKRNYSVLQPPYFMSKDVMAGVAQLEQFDEELYKVSGSGTEEKYLIATSEQPICAFHKGEWLGESELPLRYGGVSTCFRKEAGAHGKDTWGIFRVHQFEKVEQFCICEGDLEKSAAMQVEMSKASEEFYQSLGISYRVVNIVSGELNNAAIKKYDLEAWFPAYEEFRELVSCSNCTDYQSRGMEVRSGHKKMGQVEKKFVHMLNSTLCATTRTMSCILENYQTPTGVTVPEVLVPFMGGITFLDYVKELPKGKREAKGATKGGYATSAKKPPAPPXXXXXXXXXXXXANGGAA--ESSARGLPGLEEAKGGSEADAIADKITAKGLEIRDLKKSKPDKATLKPHIDTLLALKTEYKEKTGKDYAPPPAAAGAXXXXXXX--------XXXXXXXXXXXXXXXXXAITAKIVAKGDEIRELKKSKPDKATIQPHIDALIALKTQYKDETGKAYVAPGA 633
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BLAST of mRNA_H-elongata_contig10828.674.1 vs. uniprot
Match: A0A836CAY7_9STRA (Serine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAY7_9STRA)

HSP 1 Score: 744 bits (1921), Expect = 3.170e-259
Identity = 399/645 (61.86%), Postives = 468/645 (72.56%), Query Frame = 1 
Query:    1 MPLDIKLFRADHPGGDPDAIRESQRRRYQSPDIVDEVIDLDTQWRDCRSKIDILNKDRNCFQKEVTKAKKAGKEDPENAAKILDVAKEIKVQETKLAELGKKVAKRLPKIGNIVAKDVPTSDDEDKDNEVVSTYGPTPRGEHYMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLSQALINYGIAFLRKQKYSVLQPPYFMTKDVMAGVAQLEQFDEELYKVSGEGTDEKYLIATSEQPICAFHRGEWLQESELPLRYGGVSTCFRKEAGAHGKDTWGIFRVHQFEKVEQFCICEGDLEKSAALQDEMSKTAEEFYKSLGLSYRVVNIVSGELNNAAIKKYDLEAWFPAYEEFRELVSCSNCTDYQSRAMEIRSGQKKMGQQDKKYVHMLNSTLCATTRTISCILENYQTSTGVTVPEVLVPYMGGMTFLDYVKELPKSKREAKGSTKGGY--ATTKKSTPTXXXXXXXXXXLANGGGAAPESTSRGLPGVGDGGSDIDSIAKKIVAKGLEIRDLKKSKPDKAALQPHVDNLLSLKAEYKSKSGKDYSPSPGVSAAAQPPKAMAPVKAGAVSVESPGVGAPSESPAVVELRAKIAAKGDEIRELKKSKPDKAALQPLIAALLDLKADYKKEAGKDYVASDA 1929
            MP+DI+ FR D  GGDP+ +RESQRRR+   ++VDE+I +D+ WR  R K+D+L K+RN  QK+V  ++K GK D E  A+I  + +EIK +E +L  L K+ A+ LPKIGNIVA DVPTS+DE+KDNEV   +GP P GE Y HHHEVL+RIGGYEPERGV VAGHRAYFLRDAGLLL+QALI +G+AFL ++ YSVLQPPYFM KDVM+GVAQLEQFDEELYKV GEG +EKYLIATSEQP+CAFH+GEWL+E+ LPLRYGG+STCFRKEAG+HGKDTWGIFRVHQFEKVEQF ICEGD EKS A+Q EM K AEEFY++LGLSYRVVNIVSGELNNAA+KKYDLEAWFP YEE+RELVSCSNCTDYQSR+MEIRSGQKKMGQ +KKYVHMLN+TLCATTRT+SCILEN+QT  GV VP  LVPYMGG  F+ +VKELP +  EAKG TKGG    +  KS P             +     P  T          G   D IA +I A G +IRDLKK+K DKA L+PH+D LL LK ++K  +G +Y   P                                     E+ AKIA+ GD IR+LKK+K DKA LQP I ALLDLK  YK+  G DY A  A
Sbjct:    1 MPVDIRQFRTDQ-GGDPELVRESQRRRFADVNLVDEIIRVDSAWRAGRGKLDLLGKERNRVQKQVGVSRKGGKPDVEGEARIKAIGEEIKAKEAELDALEKECARLLPKIGNIVAPDVPTSNDEEKDNEVTVEHGPKPTGEQYSHHHEVLYRIGGYEPERGVQVAGHRAYFLRDAGLLLNQALIQFGLAFLVQRGYSVLQPPYFMNKDVMSGVAQLEQFDEELYKVGGEGMEEKYLIATSEQPLCAFHKGEWLEETALPLRYGGISTCFRKEAGSHGKDTWGIFRVHQFEKVEQFVICEGDFEKSDAMQHEMLKAAEEFYQALGLSYRVVNIVSGELNNAAVKKYDLEAWFPGYEEYRELVSCSNCTDYQSRSMEIRSGQKKMGQTEKKYVHMLNATLCATTRTLSCILENFQTPDGVRVPPALVPYMGGKDFIPFVKELPAALVEAKGVTKGGMPVGSAAKSAPVAAAKAPPAAGDRHSISPTPLLTPLPAAPAAATGPGAD-IAAQITAVGDKIRDLKKAKADKAELKPHIDQLLQLKTQFKEATGAEYGAKPAXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXAEIAAKIASTGDAIRDLKKAKADKAQLQPYIDALLDLKRQYKEATGADYAAPGA 642
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BLAST of mRNA_H-elongata_contig10828.674.1 vs. uniprot
Match: A0A4D9CLN9_9STRA (Serine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLN9_9STRA)

HSP 1 Score: 660 bits (1704), Expect = 6.240e-227
Identity = 365/643 (56.77%), Postives = 439/643 (68.27%), Query Frame = 1 
Query:    1 MPLDIKLFRADHPGGDPDAIRESQRRRYQSPDIVDEVIDLDTQWRDCRSKIDILNKDRNCFQKEVTKAKKAGKEDPENAAKILDVAKEIKVQETKLAELGKKVAKRLPKIGNIVAKDVPTSDDEDKDNEVVSTYGPTPRGEHYMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLSQALINYGIAFLRKQKYSVLQPPYFMTKDVMAGVAQLEQFDEELYKVSGEGTDEKYLIATSEQPICAFHRGEWLQESELPLRYGGVSTCFRKEAGAHGKDTWGIFRVHQFEKVEQFCICEGDLEKSAALQDEMSKTAEEFYKSLGLSYRVVNIVSGELNNAAIKKYDLEAWFPAYEEFRELVSCSNCTDYQSRAMEIRSGQKKMGQQDKKYVHMLNSTLCATTRTISCILENYQTSTGVTVPEVLVPYMGGMTFLDYVKELPKSKREAKGSTKGGYATTKKSTPTXXXXXXXXXXLANGGGAAPESTSRGLPGVGDGGSDIDSIAKKIVAKGLEIRDLKKSKPDKAALQPHVDNLLSLKAEYKSKSGKDYSPSPGVSAAAQPPKAMAPVKAGAVSVESPGVGAPSESPAVVELRAKIAAKGDEIRELKKSKPDKAALQPLIAALLDLKADYKKEAGKDYVASDA 1929
            MP+DI L R D  GGDP  +RESQRRR+ S ++VDEV+  D  WR   +  D   K RN  Q EV+K  KA +E  +  AKI +  K++   +  +    ++V K LPKIGNIV   VP S DE+ D EVV T+G    G+  +HHH++L RIGG+EPERG  VAGHR YFLRDAGLLL+ AL+NYG++FLR +KYSVLQPPYFM +DVMAGVAQLEQFDEELYKV+G+  DEKYLIATSEQP+C FH+GEWL+E  LPLRYGGVSTCFRKEAGAHGKD WGIFRVHQF+KVEQF +CEGDLE S  +Q+EM   AE+FY+SLG++YRVVNIVSGELNNAAIKK+DLE WFP Y+ +RELVSCSNCTDYQSR+MEIR G KK+GQ+ KKYVHMLNSTLCA TRTI  ILEN+Q   G+ VPEVLVP+MGG+TFL +V+E  K    AK + K    T                 +A   G A   T  G P      S+ + +A  I AKG EIR LK  K DKA ++PHV+ LLSLK +YK+ +G++Y+P     A    P   AP      S  + G GA  E          I AKG+EIR LK  K +K  L P IA LL+LKA YK   G D+VA  A
Sbjct:    1 MPIDINLLRVDR-GGDPALVRESQRRRFASVELVDEVLARDASWRKLVNDSDATRKARNAVQAEVSKKMKAKEECRDLVAKIQEFDKQVLEMDRAVKAAKEEVDKLLPKIGNIVDDSVPVSQDEEADTEVVRTWGTPVTGDDLLHHHDLLWRIGGFEPERGSAVAGHRGYFLRDAGLLLNMALVNYGVSFLRARKYSVLQPPYFMNRDVMAGVAQLEQFDEELYKVTGD--DEKYLIATSEQPLCGFHKGEWLEEKTLPLRYGGVSTCFRKEAGAHGKDCWGIFRVHQFDKVEQFVVCEGDLEASQKMQEEMIMAAEDFYQSLGIAYRVVNIVSGELNNAAIKKFDLEGWFPGYDTYRELVSCSNCTDYQSRSMEIRCGTKKVGQEGKKYVHMLNSTLCACTRTICAILENFQVKDGIRVPEVLVPFMGGLTFLPFVREGRKDAATAKAADKKPKKTA------------APKGMAPAVGKAQNGT--GTP------SETEDLANAIAAKGEEIRQLKLKKADKATVKPHVETLLSLKRDYKAATGEEYAPPSAGQAQNPKPAVRAPNPPPLPSTGNAGEGAGVEEA--------ITAKGEEIRALKARKAEKETLGPHIAELLNLKAKYKALTGADFVAPSA 612
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BLAST of mRNA_H-elongata_contig10828.674.1 vs. uniprot
Match: A0A7S2V1X7_9STRA (Serine--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1X7_9STRA)

HSP 1 Score: 569 bits (1466), Expect = 5.400e-195
Identity = 291/444 (65.54%), Postives = 345/444 (77.70%), Query Frame = 1 
Query:   19 LFRADHPGGDPDAIRESQRRRYQSPDIVDEVIDLDTQWRDCRSKIDILNKDRNCFQKEVTKAKKAGKEDPENAAKILDVAKEIKVQETKLAELGKKVAKRLPKIGNIVAKDVPTSDDEDKDNEVVSTYGPTPRGEHY-MHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLSQALINYGIAFLRKQKYSVLQPPYFMTKDVMAGVAQLEQFDEELYKVSGEGTDEKYLIATSEQPICAFHRGEWLQESELPLRYGGVSTCFRKEAGAHGKDTWGIFRVHQFEKVEQFCICEGDLEKSAALQDEMSKTAEEFYKSLGLSYRVVNIVSGELNNAAIKKYDLEAWFPAYEEFRELVSCSNCTDYQSRAMEIRSGQKKMGQQDKKYVHMLNSTLCATTRTISCILENYQTSTGVTVPEVLVPYMGGMTFLDYVKELPKSKREAKG 1347
            + R D  GGDP+ ++E QR+RY   ++VDEV++ D  WRD    +D L K RN  QKEV K KKA +   +  A+I    +EIK                    GN+V + VP S DE++ N  V T GPTP  + Y +HHHE L RIGGYEPERGVGVAGHRAYFLRDAG+LL+QALINYG+ FLR ++YS+LQPP+FM KD+MA VAQLEQFDEELYKV+G+  DEKYLIATSEQP+C FHR EWLQE+ELP RY G STCFRKEAG+HGKDTWGIFRVHQFEKVEQFC  E DLEKS A+Q+EM +TA++FY+SLGLSYRVVNIVSGELNNAAIKKYDLEAWFPAY+E+RELVSCSNCTDYQ+RAME+R G KKMG ++K+Y HMLNSTL ATTRTISCI+ENYQT+ GV VPEVLVP+ GG+TF  +V+EL  + +  KG
Sbjct:    1 MLRVDR-GGDPEKVKEFQRKRYAKVEVVDEVVEKDQAWRDLVKTVDELGKRRNAVQKEVGKKKKAKEPCDDLVAQIKGFDEEIKXXXXXXXXXXXXXXXXXXXXGNMVDESVPVSQDEEE-NITVCTVGPTPSNDKYPLHHHEALWRIGGYEPERGVGVAGHRAYFLRDAGVLLNQALINYGMQFLRARQYSLLQPPFFMNKDLMAAVAQLEQFDEELYKVTGD--DEKYLIATSEQPMCGFHRNEWLQEAELPKRYCGYSTCFRKEAGSHGKDTWGIFRVHQFEKVEQFCYVEDDLEKSQAMQEEMLQTAKDFYESLGLSYRVVNIVSGELNNAAIKKYDLEAWFPAYQEYRELVSCSNCTDYQARAMEVRCGTKKMGDKEKRYCHMLNSTLVATTRTISCIVENYQTTDGVRVPEVLVPFTGGVTFFPFVQELKGASKGEKG 440
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BLAST of mRNA_H-elongata_contig10828.674.1 vs. uniprot
Match: A0A7S3Y3E5_HETAK (Serine--tRNA ligase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3E5_HETAK)

HSP 1 Score: 553 bits (1426), Expect = 1.780e-188
Identity = 282/453 (62.25%), Postives = 340/453 (75.06%), Query Frame = 1 
Query:    1 MPLDIKLFRADHPGGDPDAIRESQRRRYQSPDIVDEVIDLDTQWRDCRSKIDILNKDRNCFQKEVTKAKKAGKEDP-ENAAKILDVAKEIKVQETKLAELGKKVAKRLPKIGNIVAKDVPTSDDEDKDNEVVSTYGPTPRGEHYMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLSQALINYGIAFLRKQKYSVLQPPYFMTKDVMAGVAQLEQFDEELYKVSGEGTDEKYLIATSEQPICAFHRGEWLQESELPLRYGGVSTCFRKEAGAHGKDTWGIFRVHQFEKVEQFCICEGDLEKSAALQDEMSKTAEEFYKSLGLSYRVVNIVSGELNNAAIKKYDLEAWFPAYEEFRELVSCSNCTDYQSRAMEIRSGQKKMGQQDKKYVHMLNSTLCATTRTISCILENYQTSTGVTVPEVLVPYMGGMTFLDYVKELPKSKREAKGSTK 1356
            M +DI   R D  GGDP+ ++E QR+R+   +IVDE ++ D  WR   S ID L K++N  QKE+ K  KA ++ P E   +   V  EI  +E +  +L   V K L +IGN+V  DVP S DE  +N  V T+GPTP G  Y +HH +LH+IGGYEPERG  VAG+R YFLRDAG+ L+QALINYG+ F R++ YS+L  PYFM K++M+GVAQLEQFDEELYKVSG G  + YLIATSEQPIC FH+ EWLQ  +LPLRY G STCFRKEAG+ G+D WGIFRVHQFEK+EQF  CE D+E S A+Q+EM   AE FY+SLG SYRV+N+VSGELNNAAIKKYDLEAWFP Y E+RELVSCSNCTDYQ+RAMEIR G KK G++DKKYVHMLN+TLCATTRTI CILENYQT TGV VPEVLVPYMGG TFL ++ E   + +  +G+ K
Sbjct:    1 MGIDINNLRVDR-GGDPEKVKEWQRKRFAKVEIVDECVEKDNLWRTVVSTIDNLKKEKNAVQKEIGKHMKAKEQPPPELLERKAAVEAEILQKEAEKIDLEAVVQKLLNQIGNMVDDDVPVSQDE-AENGTVRTHGPTPSGPQYNNHHNLLHKIGGYEPERGSKVAGNRCYFLRDAGVRLNQALINYGMDFCRERGYSLLSTPYFMNKEIMSGVAQLEQFDEELYKVSGSGVQDSYLIATSEQPICGFHKDEWLQPGDLPLRYCGYSTCFRKEAGSSGRDVWGIFRVHQFEKIEQFIFCESDIEVSRAMQEEMIACAEAFYQSLGFSYRVINLVSGELNNAAIKKYDLEAWFPGYGEYRELVSCSNCTDYQARAMEIRCGTKKQGEKDKKYVHMLNATLCATTRTICCILENYQTETGVRVPEVLVPYMGGTTFLPFIWEDKLASKGERGAQK 451
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BLAST of mRNA_H-elongata_contig10828.674.1 vs. uniprot
Match: A0A7S3MDB3_9STRA (Serine--tRNA ligase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MDB3_9STRA)

HSP 1 Score: 555 bits (1431), Expect = 3.300e-187
Identity = 290/461 (62.91%), Postives = 342/461 (74.19%), Query Frame = 1 
Query:    1 MPLDIKLFRADHPGGDPDAIRESQRRRYQSPDIVDEVIDLDTQWRDCRSKIDILNKDRNCFQKEVTKAKKAGKEDPENAAKILDVAKEIKVQETKLAELGKKVAKRLPKIGNIVAKDVPTSDDEDKDNEVVSTYGPTPRGEHYMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLSQALINYGIAFLRKQKYSVLQPPYFMTKDVMAGVAQLEQFDEELYKVSGEGTD--EKYLIATSEQPICAFHRGEWLQESELPLRYGGVSTCFRKEAGAHGKDTWGIFRVHQFEKVEQFCICEGDLEKSAALQDEMSKTAEEFYKSLGLSYRVVNIVSGELNNAAIKKYDLEAWFPAYEEFRELVSCSNCTDYQSRAMEIRSGQKKMGQQDKKYVHMLNSTLCATTRTISCILENYQTSTGVTVPEVLVPYMGGMTFLDYVKEL-PKSKREAKGSTKGGYATT 1374
            MPLDI LFRA+  GG+P+ IRESQRRR+ S ++VDEVI  D +WR     ID L K RN  QKEV    KA +      A+I  + +EI   E +   L  +V + +  IGN+V   VP S DEDKDN VV  +G        ++HH++L RIGGYEPERG  +AGHR YFL+DAG+LL+QA INYGIAFLRK+ Y+VLQPPY M KD+MAGVAQLEQFDEELYKVSG G+D  +KYLIATSEQPIC +H  EWL+E  LP+RY G+STCFRKEAG HGKDTWGIFRVHQFEKVEQF I EGDLE S  +Q+EM  TAEEFY+SLG  Y V+NIVSG LNNAAI+KYDLE WFP Y  +RELVSCSNCTDYQSRAMEIR G KK+G ++KKYVHMLN+TLCAT R I C+LE YQ + GV +PEVLVP+MGG+TFL +V++  P  K  A G  K   A T
Sbjct:    1 MPLDINLFRANA-GGNPELIRESQRRRFASVEVVDEVIAKDEKWRILTGTIDDLRKKRNAVQKEVAVKMKAKEAADAQVAEIKAIGEEILAAEAEQKALKIEVDRLVGTIGNLVESGVPVSQDEDKDNLVVRKWGVPRDPAGMLNHHDLLWRIGGYEPERGAQIAGHRGYFLKDAGVLLNQAFINYGIAFLRKRNYNVLQPPYMMKKDMMAGVAQLEQFDEELYKVSG-GSDGEDKYLIATSEQPICGYHANEWLEEKSLPIRYSGISTCFRKEAGKHGKDTWGIFRVHQFEKVEQFAIVEGDLETSNKMQEEMIATAEEFYQSLGFPYHVINIVSGALNNAAIRKYDLECWFPGYNAYRELVSCSNCTDYQSRAMEIRCGMKKLGDREKKYVHMLNATLCATGRAICCLLETYQEADGVRIPEVLVPFMGGITFLPFVRDSKPADKSAAAGDKKKEAAGT 459
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BLAST of mRNA_H-elongata_contig10828.674.1 vs. uniprot
Match: F0Y3J7_AURAN (Serine--tRNA ligase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3J7_AURAN)

HSP 1 Score: 545 bits (1403), Expect = 5.960e-186
Identity = 286/445 (64.27%), Postives = 339/445 (76.18%), Query Frame = 1 
Query:    1 MPLDIKLFRADHPGGDPDAIRESQRRRYQSPDIVDEVIDLDTQWRDCRSKIDILNKDRNCFQKEVTKAKKAGKEDPENAA---KILDVAKEIKVQETKLAELGKKVAKRLPKIGNIVAKDVPTSDDEDKDNEVVSTYGP-TPRGEHYMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLSQALINYGIAFLRKQKYSVLQPPYFMTKDVMAGVAQLEQFDEELYKVSGEGTD-EKYLIATSEQPICAFHRGEWLQESELPLRYGGVSTCFRKEAGAHGKDTWGIFRVHQFEKVEQFCICEGDLEKSAALQDEMSKTAEEFYKSLGLSYRVVNIVSGELNNAAIKKYDLEAWFPAYEEFRELVSCSNCTDYQSRAMEIRSGQKKMGQQDKKYVHMLNSTLCATTRTISCILENYQTSTGVTVPEVLVPYMGGMTFLDYVKEL 1320
            MPLDI + RA + GGDP+ +RESQRRR+    +VD+VI  D  WR     +D +  ++N  QKE+T  KKA  + P       K LD AK   V E ++    +KV K    IGN+VA DV  S DE+KDNEVVS +G   P   H   HHE+L+ IGGYEPERGV VAGHRAYF  D G++L+QA+INYGI+FLRK+ Y V+QPPY M KDVMAGVAQL +FDE LYKVSG   D EKYLIATSEQPICA+H+GEWL+E++LPLRY G+STCFRKEAG+HG+DTWGIFRVHQFEKVEQFCI  GDLE+SA + +EM   AEE+ +SLG  Y VVNIVSGELNNAAIKKYDLEAWFP  ++FRELVSCSNCTDYQSRAMEIR G KKMG+++KKYVHMLNSTL A  RTI C+LEN QT TGV VPEVL PYM G+TFL +V+++
Sbjct:    1 MPLDISILRA-YRGGDPEKVRESQRRRFADVGLVDKVIAEDEAWRKLTQDVDDIKAEKNKKQKEITTLKKAKADVPAQMLADLKALD-AKRAAV-EARVEPQAQKVKKLFSGIGNLVADDVVVSQDEEKDNEVVSRWGECAPTAAHS--HHELLYMIGGYEPERGVRVAGHRAYFFTDVGVMLNQAVINYGISFLRKRAYKVMQPPYMMNKDVMAGVAQLSEFDEALYKVSGGDADSEKYLIATSEQPICAYHKGEWLKEADLPLRYAGISTCFRKEAGSHGRDTWGIFRVHQFEKVEQFCITVGDLEESAKMHEEMKDLAEEYVQSLGFPYHVVNIVSGELNNAAIKKYDLEAWFPFQKQFRELVSCSNCTDYQSRAMEIRCGNKKMGEREKKYVHMLNSTLAACGRTICCLLENNQTPTGVHVPEVLWPYMDGLTFLPFVRDM 440
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BLAST of mRNA_H-elongata_contig10828.674.1 vs. uniprot
Match: A0A7S3ZR42_9STRA (Serine--tRNA ligase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZR42_9STRA)

HSP 1 Score: 546 bits (1407), Expect = 3.630e-183
Identity = 301/571 (52.71%), Postives = 376/571 (65.85%), Query Frame = 1 
Query:    1 MPLDIKLFRADHPGGDPDAIRESQRRRYQSPDIVDEVIDLDTQWRDCRSKIDILNKDRNCFQKEVTKAKKAGKE-DPENAAKILDVAKEIKVQETKLAELGKKVAKRLPKIGNIVAKDVPTSDDEDKDNEVVSTYGPTPRGEHYMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLSQALINYGIAFLRKQKYSVLQPPYFMTKDVMAGVAQLEQFDEELYKVSGEGTDEKYLIATSEQPICAFHRGEWLQESELPLRYGGVSTCFRKEAGAHGKDTWGIFRVHQFEKVEQFCICEGDLEKSAALQDEMSKTAEEFYKSLGLSYRVVNIVSGELNNAAIKKYDLEAWFPAYEEFRELVSCSNCTDYQSRAMEIRSGQKKMGQQDKKYVHMLNSTLCATTRTISCILENYQTSTGVTVPEVLVPYMGGMTFLDYVKEL---PKSKREAKGSTKGGYATTKKSTPTXXXXXXXXXXLANGGGAAPESTSRGLPGVGDGGSDIDSIAKKIVAKGLEIRDLKKSKPDKAALQPHVDNLLSLKAEYKSKSGKDYSPSPGVSAAAQPPKAMAP 1701
            MPLDI   RA + GGDP+ +RESQRRR+    +VD+VI  D +WR   +  D    ++N  QKE+T  KKA KE DP+    +  +  ++K  E       +KV K    IGN+V   VP S+DEDKDNEVV+ +G   +   Y HH E+L+ IGGYEPERGV VAGHRAYF  D G+LL+QA+INYGIAFLRK++Y +LQPPY M KD+M GVAQL +FDE LYKV+G G  EKYLIATSEQPICA+H+GEWLQESELPLRY GVSTCFRKEAG+HG+DTWGIFRVHQFEKVEQFC+  GDLEKS  + +EM   AEE+ +S+G  Y VVNIVSGELNNAAIKKYD+E WFP  +++RELVSCSNCTDYQSRAME+R G KKMG ++KKYVHMLNSTLCA  RTI C+LEN QT TGV VPEVL P+MGG+ F+ +++ +   P    +A G+                                PE+ +                     A+G +IR +K +K  K  +   VD L  LKA++    G +++P+  V  + +  K  AP
Sbjct:   60 MPLDINTIRA-YKGGDPEKVRESQRRRFADVALVDKVIAEDEEWRRLVALADDKRGEKNAKQKEITALKKAKKEVDPQMLKDLKALDAKVKEAEAATEPQLQKVLKLFNTIGNLVEDSVPVSNDEDKDNEVVNKWGTCKQDAKYSHH-ELLYMIGGYEPERGVRVAGHRAYFFTDYGVLLNQAVINYGIAFLRKKQYKILQPPYMMNKDLMGGVAQLSEFDEALYKVTG-GDQEKYLIATSEQPICAYHKGEWLQESELPLRYAGVSTCFRKEAGSHGRDTWGIFRVHQFEKVEQFCLTTGDLEKSNEMHEEMRDIAEEYIQSMGFPYHVVNIVSGELNNAAIKKYDIECWFPFQKKYRELVSCSNCTDYQSRAMEVRCGGKKMGSREKKYVHMLNSTLCACGRTICCLLENNQTETGVVVPEVLRPFMGGVDFMPFIRTMDGKPFKAPQAPGN--------------------------------PEAAA-------------------CAAQGDKIRQMKAAKASKEEIMKAVDELKKLKAKHLEVHGTEFAPTGKVEGSRKDKKKAAP 576
[Close]
BLAST of mRNA_H-elongata_contig10828.674.1 vs. uniprot
Match: A0A024TCC2_9STRA (Serine--tRNA ligase n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TCC2_9STRA)

HSP 1 Score: 534 bits (1375), Expect = 1.840e-181
Identity = 283/453 (62.47%), Postives = 343/453 (75.72%), Query Frame = 1 
Query:    1 MPLDIKLFRADHPGGDPDAIRESQRRRYQSPDIVDEVIDLDTQWRDCRSKIDILNKDRNCFQKEVTKAKKAGKEDPENAAKILDVAKEIKVQETKL---AELGKKVAKR-LPKIGNIVAKDVPTSDDEDKDNEVVSTYGPT-PRGEHYMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLSQALINYGIAFLRKQKYSVLQPPYFMTKDVMAGVAQLEQFDEELYKVSG-EGTDEKYLIATSEQPICAFHRGEWLQESELPLRYGGVSTCFRKEAGAHGKDTWGIFRVHQFEKVEQFCICEGDLEKSAALQDEMSKTAEEFYKSLGLSYRVVNIVSGELNNAAIKKYDLEAWFPAYEEFRELVSCSNCTDYQSRAMEIRSGQKKMGQQDKKYVHMLNSTLCATTRTISCILENYQTSTGVTVPEVLVPYMGGMTFLDYVKELPKSKREA 1341
            MP+DI L R +  GG+P+ +RESQR+R+   D+VD VI LD  WR  +  ++ +  + N  Q  +    KA K+D   A ++++  K+++  E  L   A+  K+V  R L KIGNIV   VP S +ED DN V  T+G   P  +   +HHEVLHRI GYEPE+GV VAGHR YFL+  G++L+QALI YG  FL K+KY++LQPP+FM KDVMAGVAQL +FDE LYKV+G +  DEKYLIATSEQP+C FH+GEW+ ES LP+RY G STCFRKEAG+HGKDTWGIFRVHQFEKVEQF +CE   E+S A+ DE+  TAE FY+SLGL YRV+NIVSGELNNAAIKK+DLEAWFPAY EFRELVSCSNCTDYQSRAMEIR G KKM Q +KKYVH+LN+TLCATTRTISCILEN+QT  GV VPEVLVP+MGG+TFL +V E PK+   A
Sbjct:    1 MPIDINLLRVER-GGNPELVRESQRKRFADVDLVDRVIALDEAWRKKQGDLETVKMNMNRLQATIKDLYKAKKKD--EAQELVEQRKKLEESEPALKLEADALKEVVDRELYKIGNIVDSSVPISQNED-DNVVTGTWGTCRPHDDSLHYHHEVLHRIDGYEPEKGVQVAGHRGYFLKGYGVMLNQALIMYGQQFLMKRKYTLLQPPFFMNKDVMAGVAQLSEFDEALYKVTGADANDEKYLIATSEQPMCGFHKGEWITESALPIRYAGTSTCFRKEAGSHGKDTWGIFRVHQFEKVEQFVLCEP--EQSPAMLDELLATAEAFYQSLGLPYRVINIVSGELNNAAIKKFDLEAWFPAYSEFRELVSCSNCTDYQSRAMEIRCGIKKMNQTEKKYVHLLNATLCATTRTISCILENFQTPEGVRVPEVLVPFMGGVTFLPFVNE-PKANTNA 446
[Close]
BLAST of mRNA_H-elongata_contig10828.674.1 vs. uniprot
Match: A0A485L5N7_9STRA (Serine--tRNA ligase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L5N7_9STRA)

HSP 1 Score: 533 bits (1374), Expect = 3.220e-181
Identity = 282/454 (62.11%), Postives = 342/454 (75.33%), Query Frame = 1 
Query:    1 MPLDIKLFRADHPGGDPDAIRESQRRRYQSPDIVDEVIDLDTQWRDCRSKIDILNKDRNCFQKEVTKAKKAGKEDPENAAKILDVAKEIKVQETKL-AE---LGKKVAKRLPKIGNIVAKDVPTSDDEDKDNEVVSTYGPTPRGEHYMH-HHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLSQALINYGIAFLRKQKYSVLQPPYFMTKDVMAGVAQLEQFDEELYKVSGE-GTDEKYLIATSEQPICAFHRGEWLQESELPLRYGGVSTCFRKEAGAHGKDTWGIFRVHQFEKVEQFCICEGDLEKSAALQDEMSKTAEEFYKSLGLSYRVVNIVSGELNNAAIKKYDLEAWFPAYEEFRELVSCSNCTDYQSRAMEIRSGQKKMGQQDKKYVHMLNSTLCATTRTISCILENYQTSTGVTVPEVLVPYMGGMTFLDYVKELPKSKREAK 1344
            MP+DI + R +  GG+PD +RESQR+R+   D+VD VI LD  WR  +   + +  + N  QK++    K+ K+D   A  ++D  K +   E  L AE   + + V K L KIGN+V   VP S +ED DNEVV+T+G     E  +H HHEVLHRI GYEPE+GV VAGHR YFL+  G++L+QALI Y   FL  +K+++LQPP+FM K+VMAGVAQL +FDE LYKV+G+   DEKYLIATSEQP+C FH+ EW+ ES LP+RY G STCFRKEAG+HGKDTWGIFRVHQFEKVEQF +CE   EKS A+  EM  TAE FY+SLGL YRV+NIVSGELNNAAIKK+DLEAWFPAY EFRELVSCSNCTDYQSRAMEIR G KKM Q +KKYVH+LN+TLCATTRTISCILEN+QT  GV VPEVLVP+MGG+TFL +V+E P + +E K
Sbjct:    1 MPIDINMLRVER-GGEPDLVRESQRKRFADVDLVDRVIALDEAWRKKQGDWETVKMNVNALQKQIQDLIKSKKKD--EAQPLIDERKRLAETEPALKAEADAIKETVDKELYKIGNLVDPTVPVSQNED-DNEVVATWGTCRTNEDSLHYHHEVLHRIDGYEPEKGVKVAGHRGYFLKGYGVMLNQALIMYSQQFLMARKHTLLQPPFFMNKEVMAGVAQLSEFDEALYKVTGQDANDEKYLIATSEQPMCGFHKDEWITESSLPIRYAGTSTCFRKEAGSHGKDTWGIFRVHQFEKVEQFVLCEP--EKSPAMLQEMLSTAEAFYQSLGLPYRVINIVSGELNNAAIKKFDLEAWFPAYAEFRELVSCSNCTDYQSRAMEIRCGIKKMNQTEKKYVHLLNATLCATTRTISCILENFQTPEGVRVPEVLVPFMGGVTFLPFVQEAPVNLQEKK 448
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10828.674.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT02_ECTSI0.000e+075.62Serine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A836CAY7_9STRA3.170e-25961.86Serine--tRNA ligase n=1 Tax=Tribonema minus TaxID=... [more]
A0A4D9CLN9_9STRA6.240e-22756.77Serine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=... [more]
A0A7S2V1X7_9STRA5.400e-19565.54Serine--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa ... [more]
A0A7S3Y3E5_HETAK1.780e-18862.25Serine--tRNA ligase (Fragment) n=1 Tax=Heterosigma... [more]
A0A7S3MDB3_9STRA3.300e-18762.91Serine--tRNA ligase n=1 Tax=Spumella elongata TaxI... [more]
F0Y3J7_AURAN5.960e-18664.27Serine--tRNA ligase (Fragment) n=1 Tax=Aureococcus... [more]
A0A7S3ZR42_9STRA3.630e-18352.71Serine--tRNA ligase n=2 Tax=Pelagomonas calceolata... [more]
A0A024TCC2_9STRA1.840e-18162.47Serine--tRNA ligase n=3 Tax=Aphanomyces TaxID=1008... [more]
A0A485L5N7_9STRA3.220e-18162.11Serine--tRNA ligase n=1 Tax=Aphanomyces stellatus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10828contigH-elongata_contig10828:175..8555 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score928.7
Seed ortholog evalue1.7e-267
Seed eggNOG ortholog2880.D7FT02
Preferred nameEPRS
KEGG rclassRC00055,RC00523
KEGG koko:K01875,ko:K01885,ko:K14163
KEGG ReactionR03661,R03662,R05578,R08218
KEGG Pathwayko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120
KEGG ModuleM00121,M00359,M00360
GOsGO:0000122,GO:0000166,GO:0000976,GO:0000977,GO:0000978,GO:0000987,GO:0001012,GO:0001046,GO:0001047,GO:0001067,GO:0001525,GO:0001568,GO:0001569,GO:0001763,GO:0001817,GO:0001818,GO:0001944,GO:0002009,GO:0002181,GO:0002376,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003729,GO:0003824,GO:0004812,GO:0004818,GO:0004819,GO:0004827,GO:0004828,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006355,GO:0006357,GO:0006396,GO:0006399,GO:0006412,GO:0006417,GO:0006418,GO:0006424,GO:0006425,GO:0006433,GO:0006434,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0006950,GO:0006952,GO:0006955,GO:0007275,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009069,GO:0009653,GO:0009719,GO:0009725,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010243,GO:0010467,GO:0010468,GO:0010494,GO:0010556,GO:0010558,GO:0010574,GO:0010605,GO:0010608,GO:0010629,GO:0010876,GO:0015711,GO:0015718,GO:0015849,GO:0015908,GO:0015909,GO:0016020,GO:0016043,GO:0016070,GO:0016259,GO:0016525,GO:0016874,GO:0016875,GO:0017076,GO:0017101,GO:0017102,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019752,GO:0019899,GO:0022603,GO:0022607,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032868,GO:0032869,GO:0032870,GO:0032991,GO:0033036,GO:0034097,GO:0034248,GO:0034249,GO:0034341,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0035239,GO:0035295,GO:0035613,GO:0035639,GO:0035770,GO:0036094,GO:0036464,GO:0042221,GO:0042802,GO:0042803,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043434,GO:0043436,GO:0043565,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044539,GO:0045087,GO:0045765,GO:0045892,GO:0045934,GO:0046483,GO:0046686,GO:0046872,GO:0046914,GO:0046942,GO:0046983,GO:0048514,GO:0048519,GO:0048523,GO:0048646,GO:0048729,GO:0048731,GO:0048754,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051020,GO:0051093,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0060429,GO:0060562,GO:0061138,GO:0065003,GO:0065007,GO:0070887,GO:0071310,GO:0071345,GO:0071346,GO:0071375,GO:0071417,GO:0071495,GO:0071702,GO:0071704,GO:0071840,GO:0071944,GO:0072358,GO:0072359,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0097452,GO:0098619,GO:0140098,GO:0140101,GO:1901265,GO:1901342,GO:1901343,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902679,GO:1903506,GO:1903507,GO:1903670,GO:1903671,GO:1904046,GO:1990837,GO:1990904,GO:2000026,GO:2000112,GO:2000113,GO:2000181,GO:2001141
EggNOG free text desc.glutamyl-tRNA aminoacylation
EggNOG OGsCOG0008@1,COG0172@1,KOG1147@2759,KOG2509@2759
EC6.1.1.11,6.1.1.15,6.1.1.17
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSeryl-tRNA synthetase
Ec32 orthologEc-24_004300.1
Exons13
Model size2178
Cds size2178
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929611.153631-CDS-H-elongata_contig10828:174..3111622929611.153631-CDS-H-elongata_contig10828:174..311Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10828 175..311 -
1691679090.7802024-CDS-H-elongata_contig10828:174..3111691679090.7802024-CDS-H-elongata_contig10828:174..311Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10828 175..311 -
1622929611.1700678-CDS-H-elongata_contig10828:350..5941622929611.1700678-CDS-H-elongata_contig10828:350..594Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10828 351..594 -
1691679090.7911143-CDS-H-elongata_contig10828:350..5941691679090.7911143-CDS-H-elongata_contig10828:350..594Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10828 351..594 -
1622929611.189831-CDS-H-elongata_contig10828:854..11211622929611.189831-CDS-H-elongata_contig10828:854..1121Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10828 855..1121 -
1691679090.807521-CDS-H-elongata_contig10828:854..11211691679090.807521-CDS-H-elongata_contig10828:854..1121Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10828 855..1121 -
1622929611.215358-CDS-H-elongata_contig10828:1593..18571622929611.215358-CDS-H-elongata_contig10828:1593..1857Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10828 1594..1857 -
1691679090.8210034-CDS-H-elongata_contig10828:1593..18571691679090.8210034-CDS-H-elongata_contig10828:1593..1857Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10828 1594..1857 -
1622929611.226867-CDS-H-elongata_contig10828:2110..22661622929611.226867-CDS-H-elongata_contig10828:2110..2266Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10828 2111..2266 -
1691679090.8380406-CDS-H-elongata_contig10828:2110..22661691679090.8380406-CDS-H-elongata_contig10828:2110..2266Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10828 2111..2266 -
1622929611.2395058-CDS-H-elongata_contig10828:2731..29051622929611.2395058-CDS-H-elongata_contig10828:2731..2905Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10828 2732..2905 -
1691679090.848695-CDS-H-elongata_contig10828:2731..29051691679090.848695-CDS-H-elongata_contig10828:2731..2905Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10828 2732..2905 -
1622929611.2499564-CDS-H-elongata_contig10828:3434..35881622929611.2499564-CDS-H-elongata_contig10828:3434..3588Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10828 3435..3588 -
1691679090.8570824-CDS-H-elongata_contig10828:3434..35881691679090.8570824-CDS-H-elongata_contig10828:3434..3588Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10828 3435..3588 -
1622929611.268477-CDS-H-elongata_contig10828:4025..41321622929611.268477-CDS-H-elongata_contig10828:4025..4132Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10828 4026..4132 -
1691679090.8650506-CDS-H-elongata_contig10828:4025..41321691679090.8650506-CDS-H-elongata_contig10828:4025..4132Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10828 4026..4132 -
1622929611.281983-CDS-H-elongata_contig10828:5071..51651622929611.281983-CDS-H-elongata_contig10828:5071..5165Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10828 5072..5165 -
1691679090.873964-CDS-H-elongata_contig10828:5071..51651691679090.873964-CDS-H-elongata_contig10828:5071..5165Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10828 5072..5165 -
1622929611.2921789-CDS-H-elongata_contig10828:5497..56341622929611.2921789-CDS-H-elongata_contig10828:5497..5634Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10828 5498..5634 -
1691679090.883953-CDS-H-elongata_contig10828:5497..56341691679090.883953-CDS-H-elongata_contig10828:5497..5634Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10828 5498..5634 -
1622929611.3046234-CDS-H-elongata_contig10828:5868..60231622929611.3046234-CDS-H-elongata_contig10828:5868..6023Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10828 5869..6023 -
1691679090.8967686-CDS-H-elongata_contig10828:5868..60231691679090.8967686-CDS-H-elongata_contig10828:5868..6023Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10828 5869..6023 -
1622929611.3178968-CDS-H-elongata_contig10828:6455..66361622929611.3178968-CDS-H-elongata_contig10828:6455..6636Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10828 6456..6636 -
1691679090.9045143-CDS-H-elongata_contig10828:6455..66361691679090.9045143-CDS-H-elongata_contig10828:6455..6636Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10828 6456..6636 -
1622929611.3308742-CDS-H-elongata_contig10828:8447..85551622929611.3308742-CDS-H-elongata_contig10828:8447..8555Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10828 8448..8555 -
1691679090.9119854-CDS-H-elongata_contig10828:8447..85551691679090.9119854-CDS-H-elongata_contig10828:8447..8555Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10828 8448..8555 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10828.674.1prot_H-elongata_contig10828.674.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig10828 175..8555 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig10828.674.1

>prot_H-elongata_contig10828.674.1 ID=prot_H-elongata_contig10828.674.1|Name=mRNA_H-elongata_contig10828.674.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=726bp
MPLDIKLFRADHPGGDPDAIRESQRRRYQSPDIVDEVIDLDTQWRDCRSK
IDILNKDRNCFQKEVTKAKKAGKEDPENAAKILDVAKEIKVQETKLAELG
KKVAKRLPKIGNIVAKDVPTSDDEDKDNEVVSTYGPTPRGEHYMHHHEVL
HRIGGYEPERGVGVAGHRAYFLRDAGLLLSQALINYGIAFLRKQKYSVLQ
PPYFMTKDVMAGVAQLEQFDEELYKVSGEGTDEKYLIATSEQPICAFHRG
EWLQESELPLRYGGVSTCFRKEAGAHGKDTWGIFRVHQFEKVEQFCICEG
DLEKSAALQDEMSKTAEEFYKSLGLSYRVVNIVSGELNNAAIKKYDLEAW
FPAYEEFRELVSCSNCTDYQSRAMEIRSGQKKMGQQDKKYVHMLNSTLCA
TTRTISCILENYQTSTGVTVPEVLVPYMGGMTFLDYVKELPKSKREAKGS
TKGGYATTKKSTPTPKKTTAAAAPLANGGGAAPESTSRGLPGVGDGGSDI
DSIAKKIVAKGLEIRDLKKSKPDKAALQPHVDNLLSLKAEYKSKSGKDYS
PSPGVSAAAQPPKAMAPVKAGAVSVESPGVGAPSESPAVVELRAKIAAKG
DEIRELKKSKPDKAALQPLIAALLDLKADYKKEAGKDYVASDAPQAPGKQ
AKPIPKPSSAKAPAEHGAGKKAPKPAARKSAPAAVPGVGRDLPPTPAAKG
SVIENGKPNLDNLARHLLDFSYVAGE
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mRNA from alignment at H-elongata_contig10828:175..8555-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig10828.674.1 ID=mRNA_H-elongata_contig10828.674.1|Name=mRNA_H-elongata_contig10828.674.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=8381bp|location=Sequence derived from alignment at H-elongata_contig10828:175..8555- (Himanthalia elongata Himel1 dioecious)
ATGCCTCTCGATATTAAGTTGTTCCGGGCTGATCATCCTGGAGGCGACCC
AGACGCAATTCGGGAATCTCAGAGGAGACGGTATCAGTCTCCTGATATTG
TGGATGAGGTGAGGCCGGGCATGACTTTGTTTGTTCACTGGAGACATGCC
CCACCTCTACGCCTACTAAATAGTAGGGGATTATGCAAAACACATGATCT
AGAGGAGCGCATATCGGGCTTTCATGCGATGCAGCTTGTCCCTCCCGACC
TTTTTGTCTGTGTTTGTTTAGCTTTGACTGTAGCGTCTTGCGGCACCTTT
GGGTGTGTGGAGGAGAGCTCTTGCGGAACTTCGACAGAGATATCGGTAAG
GCAGCGGTTCTTCAGGTGTCGACCAGCGTACGGCTAGCAGTGAATAAGCT
CCAGTCGTCGGGTTTTCTCTCGACATAGAGCAGTTGATGGCGACCTGTGC
CGGTACAAGCACAGAAGCCTGTAGTTGTTGACACTGCCGCCTGTAGGACT
TGATCTAAATGCCCGTGGGAAACGATAATATCATATTATAATAGTACAGG
AGATATCAAAGTCGATATGTATTTGCTTTACACAGGAGAGGATAACATAA
CATATACTTACTTCCTATAGTACATATTGTACTTAATTGTGCAAAATCAA
GAACACTAGAAAGCTTTTGATCGAACAAACCGGCCGGAAACCATCTGAGG
AAGCTTAATGGGCAACACACTATGACGGCAACAACTCTACATGGATTGGT
TGCGTCAACGCTGTAATACACCGTCATGGAGTATGCCACGGTAAAAAAAA
TGACCAACTCAAACGTAGTAAACGAGCGTGTGCATTGTGCATTTCAGAAC
TTTCTCTTTGGTAGGTTCGCCTCGCCCATTCCGCCCCAGCGGAGGAATAT
AAATATATATTCACCAGTAGATTTACCCTTACCTCTAGACATAGATCTAG
AGCTAGAGGAAGAGCATGGGGATCGCGTAGAGCTTAAGGAGCTTATACTA
CCGTAGCGGTGTTTGACGAGGAGCCCCTGTTGATATCAATTGTTACAAAC
GGAGTACTTTAGCATCTAGTGCGTCAAAAGATCAATGTCATGGGGATATG
GGGCACACTCGTCCGACTGGTTCACATTATCCAACTTCTGTCGGTGGACC
TTCCAACGTGCTAGGTACCCCTCTCTCCCCGGTAGGTTCACACCGCCTAA
AAGTTTTTTTTCGCGATCCAATTTCAGCCCACTCCTGCACCTGCATGGTC
GCACATCATTGAGCCCATGGTAGAAATTTGCTTACTCCCGTCCCCGCGCG
TCAATACCGCTACGGTTTGTGCTCATAGATAGTAATGTATACTATTAATT
ACACACTCGAGCCTGACGATAGTTGGTCATAGTCCCCTTAACACTTCACC
ACTCGTCGTGGTGTAATAAAGGTGGTGTGGATGATGTTCGGAGGGTTTTG
ATTGAGTTCATATGTTTTTTATTAAAAAAATACGATTAAATCATGAACGA
CTATTAATATATATGTGAACTATTTTCTTGTGAAGGTTTTGTGCTCATAG
GTTGGAATGTACACACTCGGATATGACGATTGTTGGTCATAGTCCTCCTG
ACTTCACGAGTGGGGTAATGGAGTATATAGGATAGAGTGTAGATGTTCAG
AGAGTTTGATTGGGTTCAAATAACCTTTGTAGCGGACCGCACTAGTGACT
ATTAATAGTGGCTATTAATAGTGGCTATTAATAGTGGCTATCGTGGTTAC
CACTATGAATAGACTAGGCTACTCGTGGCGCAAATCGACCAGTACAAGTG
CTCGGGCAGGATTTCAAGATGAAGATACTTGCGTTATCATGTTCATCGAA
ATACCAAGCCAAGAAGACCCCTGTCACCCCTCCCACTGCCCCCTACCCGG
TGACCACCACGCCGAACAGGTGATCGATCTGGACACCCAGTGGCGAGACT
GTCGCTCTAAAATTGACATCCTCAACAAGGACAGGAACTGTTTCCAGAAG
GAGGTGACCAAGGCCAAGAAGGCCGGTAAAGAAGACCCTGAAAATGCCGC
CAAGATCCTCGACGTGGCCAAGGAGATCAAGGTGCAGGAGACCAAGCTAG
GTAAGATATGTCTTATATCCCTGTCGATAAAATCAATACTCCCCTTACGG
CTCGAAAGCGTTTGACAATAATCGGAGAGGGTCGCTGACGAGAGGGTGTA
GGACGATGCATACGGTCGCCCTTTAGCACCGCGATGGAGCTTGCTTCGCT
GCGGCCCCAAAGCGAGATGTAGTGCGAGAGGGGAACGTCGCGCGCGGGGC
CTAGTTGGAGATGTTTGGGTTTGCAACAGAGGAGAGGCGCGCAAAGAGCG
CGGTTGCATCCGTCGTAAATGCAATATGCAGCAGCTGGACTGGTTAGCAG
TTTAAATAACAGTTTGCTTTACTAAATCGTGGAAGCATCGCGGGCCCTTC
CAATAGAGCGGTCGTGAAAAGATAACATGTAACCCCCCCCTCCACCCACC
CTCCCGATGTTGGTATCTCCATGACATGACAGCGGAGCTCGGCAAGAAGG
TAGCGAAGCGGCTGCCTAAGATCGGCAACATAGTGGCAAAGGACGTGCCG
ACCTCGGACGACGAAGACAAGGACAACGAGGTCGTCAGCACGTACGGTCC
CACCCCCAGGGGCGAGCACTACATGCACCACCACGAGGTACCAGCTCTAT
TCATGGGTTAATAGGTGGAAGTACACCGCCCGCGCTGTTGCGGTGAACTT
TTGTGTCTAGCATGGATCTCTGGGCGATATTAATATCAGCTCCTTCCCTG
AGCATTTTTAGTGGATGTCACTCTACGCCACATCCTCGCGCCCACCTGGA
CGCAAAAAAAAAACTAATGTTGAAGTTTGCGCTCGCTCTTTCCTGTGCAC
CCCCGCCGCTGGGACAATCAGGTGTTGCATCGAATAGGCGGCTACGAGCC
AGAGCGGGGCGTGGGGGTCGCGGGACACCGCGCCTACTTCTTGCGCGATG
CCGGGCTTCTCCTGAGCCAGGCCCTGATTAACTACGGCATCGCCTTTCTC
AGGAAGCAGTGAGCGGACAGCACCGTTGTTTGCCGCGCTCGTTGTCCCCC
TCCTCTTGACATTCACGTCCCCACCGCCTCCGACTCTATATGTATCCCCC
CTATTGCCCCACCAATGACAACGTCTAAGACCATTTTGTGTCGCAACTCG
TGCTGTACCGGAGATATCTTTGCCGTTGCCTTGATGAGCCGCACGGCAGA
GCCCTTCGCAGTAGCTAGCCTTCTCCCGCGCTGTTGACTCGCTTGTTCCT
TGAAATGGTACCGGGTATTTTACCAAAGTGTCCGTGTGTTTCTGATTGGG
AGTGCGGTTTTATTGGTTGTGATCGTTTCGGCCCCACCAGGAAATACTCC
GTTCTACAGCCTCCTTACTTCATGACCAAGGACGTCATGGCCGGAGTGGC
GCAACTCGAGCAGTTCGACGAGGAGCTCTACAAGGTACGTTGACGTTTCT
CGTTCGCGGCACATTAGGAAACCAACCATGTAACGGTTTTCGCCCGTTGA
ATCAAATTAGAACAGTACCACATCAATAACAGTTAGTTTCTCAAACAAAG
CGTTTTTGTTGAAAATATGTTGATGCGTCGTAAAATTGTGTTCGTGGAAG
TAAGCTATTATGTTGAAGTATCTAGGTAATGTTTTCTTGTGGATTCGCGT
CCCCGGTAGCGCCCTGTCTGGTTTGTTCTAACGAAAATAAACATTGGGGA
GGGGGAGGGGAAGAAGGGAGTGTCTACCATGGGAAGACAGCTATTAGCAC
TACTATTAATAGAATCCGACGGTTAACGCGTATAGTCCATGGATGGAGGA
AGGCGAGAAAATGGCTATTGGTAACTTATGTTGAAGGTATGTCGTATCCC
AATGGTGATATTAATTAACCATTTATCTAAAAAATACGGGGACGGAACGG
TATATTGGATTTCCGATGGTCAGACGGCGTTTCACAAGGATGATTGGACA
TTGGACACTGGACATGACACACCGGGTAACCTAATATTGTCCATTCAACG
GGCGTTATTGTTACCGTTACCGTGATCGTTATACTACACTCGGAGCACCG
CACAGAGACTTTGATCTCCACGCGAACGCATAAGCGCCACACCCGCACCA
CATTGACAGTGGTGAATGTGTAGTTTACTCCAATTGTAGTCTGCTCCACA
GTTATAGTGATAGTGAGTACTCTCATAAGTATAGGGTTGCTGGGGGGTTC
CAATGATCTATTCCTCAGCAGGCATCCTTGTAAATAATAATGGTGTGATA
TGTTTCATTCCTTTGTAGGAAGAGACAAAGACTCTTCGACCGAGGTCTCA
GACCTCATGGGCCACACTGCATGAACTACAGTATCCCATTGCGGGGTGGG
GGGGGTGAAACGTAAATCGACAGGTTAGCGGAGAGGGCACGGACGAAAAG
TATCTGATCGCCACGTCGGAGCAGCCCATTTGCGCTTTTCACAGAGGGGA
GTGGCTCCAGGAATCAGAGCTGCCACTGAGGTGAGTAAAGCCCACAGACG
GGCTGAGCAGTTGTATCCTTCGACGATTATGAAACGAGCGGGTCGTCGTC
GAAATCACTGCTGATGTCATGTCACGGTCGATTTTCTGCGCAGACGGTAG
CGTGATACTGTACCGCAAGGCAAGACCGCAAGGGGGTGATACCGCAAGGC
AAGAATGGGTAGAAGGGGGTGAGGGGAGAGGCTGTCACACATTTTGTCTA
CCGGTATTAGCAAAGTAGTCGCGATGGTGTTGGAGGTGGTGGTAGCAGCC
GTAAAGCTCTAGTCGTAACGGGTGCCACCCTAGGCGCGTTCGAGTTGTGG
TCATGATTGTGGGCCGGGGCCCCGCCATGTCAACTCTCGTTTGCCACGGT
GTCGCTCTTCGGAGCGAAAACGATACGACGTGTTTCCTCGTGCCGCGGCG
TGGCGTGACGTCGGTAGGTACGGAGGCGTTTCCACGTGCTTCCGAAAGGA
GGCGGGTGCGCACGGGAAGGACACCTGGGGCATCTTCAGGGTGCACCAGT
TCGAGAAGGTGGAGCAGTTTTGCATCTGCGAGGGAGATCTCGAGAAGAGC
GCGGCTTTGCAGGACGAAATGGTACGTCGAGGGCTAACGTGCCGTCTGGG
GCATCCTCTGTCCACCTAATAGTGCAGTTGCGCCGCATTGATGTCTTGGA
TATGTGATTATGTTTGTTTCTGTCTGCGGGTGTGTCTCATCTCCTGCCAC
CAAAACTAGTGTAAATGCGAGCGCGAATTTCTTGAACCAGATATTGTGTG
TCGAGTGTGTCGCCGTGTTTATTCAGAAATTGTCCCGTCCGTATAAATAA
AAGGCCGTAGAAGATGTCTCTGTCTTCGCCCGGAGCTCAGTATGACCCTT
CGGTCACCCTACCGTATCGTATCAAACGCTACCGGATCACGGCGTATCGT
ATTTCACCTAATCGTGTTATTTTCCACCGCTCCTGTCTCCAGACCCCACC
ACCCTAAATTGTACCATACTATACCATGCCATATCATATAATCACGTACC
GTCTCCAGCAACCCTACGCGGCCTAGCTTGACGGGGATTGACTCTTTAGT
TTTTGTCTCCTCGTGATGGTGGCGTTACACGCCTCTATATGTCACCACAG
AGTAAGACTGCCGAGGAGTTCTACAAGAGCCTGGGCCTGTCGTACCGGGT
GGTGAACATCGTTTCGGGTGAGCTGAACAACGCCGCCATCAAGAAGTACG
ACCTGGAGGCATGGTTTCCGGCGTACGAGGAGTTCCGAGAGCTTGTCTCG
TGCTCCAACTGCACCGACTACCAGGTGACAAAGTGGAAGTTAGCTCTAAA
GTGGTGAAACGGTAATGGGGTACAATTTTGGTCGGGTTTTGGTCTGGTTC
TGGAATAACAATATATAAGCCAAGTCAAGAGCCCAGCCTGGTTATCTTGT
AGAGCCTGACCCTATGCGTAATCGTATGTTTTGGGGATCCGACCCCTGCG
AACGCCTCTCTTCATTGTGAGATTTGGCATCCCGAGACAGCATCCCCGGG
ATTAGTAATTTAAAGTAACAGAGTGTAAGGGGGGGGGGGGAGAGCGTGTG
CGTTTTTTGCTATGATCGCCGGGGCGGTCTGACTCTTATTGGTGGGCGTT
CGGGGACTTTTCTAGAAAACAGAAAACACAGGCCACACGTATCGCATGCC
CAACTATTATATGTGGCGCAGCCAGAGAGAGGAGGGCATCTGACATAATG
GTGCGGCACACGCACGCGTATGATTGGTTCTCGCCGCAGAGCCGAGCGAT
GGAAATTCGCTCCGGCCAGAAGAAGATGGGCCAGCAGGACAAGAAGTACG
TGCACATGCTCAACTCCACGCTGTGTGCAACTACCCGCACCATCTCCTGC
ATCCTGGAGAACTACCAGACCTCTACGGGCGTGACGGTACCCGAGGTGAG
TCATAATTAAGTTTGTGTGTCATAAATGTCTGTCCGCGTTTTGTCAGTTC
GTGTGTGATTGCTGGTGAGGAGTGTTTGGTTTTACCCCCTCCGCCCAAAA
GGCGATTGAGGAACCCACCTTTTAGGCATTTTTTCCCATTCTGGAGGGGT
CGCTGTCAATGGACAAATCACGTAAACCGCTCCCGCGCTAGAGATGGCGG
TTGCTTCCAGGGCGTTATTATCATGCCTCTTCCCTATCTCCTCTCCAGGT
TCTGGTGCCCTACATGGGCGGCATGACCTTCCTGGACTACGTGAAGGAGC
TCCCGAAGTCTAAGCGAGAGGCCAAGGGTTCTACCAAGGGCGGATACGCC
ACCACCAAGAAGTCAACCCCGACCCCCAAAAAAACTACCGCTGCCGCCGC
TCCCTTGGCCAACGGGGGAGGAGCCGCGCCCGAATCTACTTCGCGTGGGT
TGCCGGGAGTTGGCGACGGCGGAAGCGATATCGATTCCATCGCCAAGAAA
ATCGTAGCAAAGGTTTTCGACGTGTCGATGTTGTGTACCATTTTTAGAGA
TGATTTGGGTGGGGCACAACAAAAAATGCCGTGTGCTGTATCAGGGTTTT
CTTATATGTAATGTGGCTGACCAAGAGGCTCTCGCGCGGTTTGAGACGCC
GAGATCTCCTACCGTGACGACTGCGGGACCGTCTCGCTTTCTACACGCCG
CGGTATAATCTCGAAGCAGATAGCACAGTTTGTTACACGAGTGTATGCAT
TGTTGCATATCCTGTAGACGAGTACTGCATGCTCGTGGACATCGCCCAGG
CAAGTCACCCCCTTCCTTCCAGATGAATATGATAGCACTCATTTGACTCT
TAACGAAAGCATAAAGCGGCGCATGAAATGGTGTGCGGCGCAGCGGAGCA
GTAAAAGGAAAATAAACCAACCAAGGAGCAGTTAAGATCGTGCGCGCGTG
TCTTTTTTTCTGTACGCTACTCCGCCACCACTAGGGTCTGGAGATTCGTG
ACCTAAAGAAATCCAAGCCGGATAAGGCAGCCCTTCAACCTCACGTGGAC
AACTTGCTGTCCCTCAAGGCAGAGTACAAGAGCAAGAGTGGCAAGGACTA
CTCGCCTTCTCCTGGGGTCTCTGCTGCCGCTCAGCCCCCAAAGGCAATGG
CACCGGTTAAGGCAGGGGCTGTTTCGGTGGAATCCCCGGGAGTGGGCGCG
CCCTCGGAATCCCCGGCGGTCGTGGAACTCCGCGCCAAGATCGCCGCCAA
GGTGACCTTGCGAACGTACAAGTTTACGCTTTGAAACGGTGGGCAAAAAA
TATTTCGCCACCGCAGCCGTTCCTGTTGCTGTACCATTTACCGTTTGCTT
TACATTGTTTGCTGTCATAGTAGAGTACGCAAACAGTTTGTGGGAGGGTG
CGAAGTGCGTGCACATCCGCAAGAGACTCCTTGTTAGCTCGTTTATCTTC
AGTTTTTTTTTAGGCACCCTTCCCCCCCCCCACTCGTTCATCCCGCCTTA
CATTTTTGCAGGGAGACGAGATCCGAGAGCTCAAGAAGTCCAAGCCCGAC
AAGGCCGCTCTCCAGCCCCTCATTGCCGCCCTGCTCGATCTCAAAGCGGA
CTACAAGAAGGAGGCGGGCAAGGACTACGTGGCCTCGGACGCTCCACAGG
CTCCAGGGAAGCAGGCCAAGCCGATTCCGAAGCCATCGTCCGCGAAGGCG
CCTGCCGAGCATGGTGCTGGGAAGAAGGCGCCCAAGCCGGCGGCGCGAAA
AAGTGGTGTAACGGCGACAGCGGCTACGACTATGCCTGTGATAGCGCCTG
CAGCGGTGCCAGGCGTGGGCCGTGACCTTCCCCCAACCCCCGCTGCGAAG
GGGTCCGTGATAGAGAATGGAAAACCCAACTTGGATAATCTCGCACGGCA
CCTGCTGGATTTTTCTTACGTTGCAGGCGAG
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Coding sequence (CDS) from alignment at H-elongata_contig10828:175..8555-

>mRNA_H-elongata_contig10828.674.1 ID=mRNA_H-elongata_contig10828.674.1|Name=mRNA_H-elongata_contig10828.674.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4356bp|location=Sequence derived from alignment at H-elongata_contig10828:175..8555- (Himanthalia elongata Himel1 dioecious)
ATGCCTCTCGATATTAAGTTGTTCCGGGCTGATCATCCTGGAGGCGACCC
AGACGCAATTCGGGAATCTCAGAGGAGACGGTATCAGTCTCCTGATATTG
TGGATGAGATGCCTCTCGATATTAAGTTGTTCCGGGCTGATCATCCTGGA
GGCGACCCAGACGCAATTCGGGAATCTCAGAGGAGACGGTATCAGTCTCC
TGATATTGTGGATGAGGTGATCGATCTGGACACCCAGTGGCGAGACTGTC
GCTCTAAAATTGACATCCTCAACAAGGACAGGAACTGTTTCCAGAAGGAG
GTGACCAAGGCCAAGAAGGCCGGTAAAGAAGACCCTGAAAATGCCGCCAA
GATCCTCGACGTGGCCAAGGAGATCAAGGTGCAGGAGACCAAGCTAGGTG
ATCGATCTGGACACCCAGTGGCGAGACTGTCGCTCTAAAATTGACATCCT
CAACAAGGACAGGAACTGTTTCCAGAAGGAGGTGACCAAGGCCAAGAAGG
CCGGTAAAGAAGACCCTGAAAATGCCGCCAAGATCCTCGACGTGGCCAAG
GAGATCAAGGTGCAGGAGACCAAGCTAGCGGAGCTCGGCAAGAAGGTAGC
GAAGCGGCTGCCTAAGATCGGCAACATAGTGGCAAAGGACGTGCCGACCT
CGGACGACGAAGACAAGGACAACGAGGTCGTCAGCACGTACGGTCCCACC
CCCAGGGGCGAGCACTACATGCACCACCACGAGCGGAGCTCGGCAAGAAG
GTAGCGAAGCGGCTGCCTAAGATCGGCAACATAGTGGCAAAGGACGTGCC
GACCTCGGACGACGAAGACAAGGACAACGAGGTCGTCAGCACGTACGGTC
CCACCCCCAGGGGCGAGCACTACATGCACCACCACGAGGTGTTGCATCGA
ATAGGCGGCTACGAGCCAGAGCGGGGCGTGGGGGTCGCGGGACACCGCGC
CTACTTCTTGCGCGATGCCGGGCTTCTCCTGAGCCAGGCCCTGATTAACT
ACGGCATCGCCTTTCTCAGGAAGCAGTGTTGCATCGAATAGGCGGCTACG
AGCCAGAGCGGGGCGTGGGGGTCGCGGGACACCGCGCCTACTTCTTGCGC
GATGCCGGGCTTCTCCTGAGCCAGGCCCTGATTAACTACGGCATCGCCTT
TCTCAGGAAGCAGAAATACTCCGTTCTACAGCCTCCTTACTTCATGACCA
AGGACGTCATGGCCGGAGTGGCGCAACTCGAGCAGTTCGACGAGGAGCTC
TACAAGGAAATACTCCGTTCTACAGCCTCCTTACTTCATGACCAAGGACG
TCATGGCCGGAGTGGCGCAACTCGAGCAGTTCGACGAGGAGCTCTACAAG
GTTAGCGGAGAGGGCACGGACGAAAAGTATCTGATCGCCACGTCGGAGCA
GCCCATTTGCGCTTTTCACAGAGGGGAGTGGCTCCAGGAATCAGAGCTGC
CACTGAGGTTAGCGGAGAGGGCACGGACGAAAAGTATCTGATCGCCACGT
CGGAGCAGCCCATTTGCGCTTTTCACAGAGGGGAGTGGCTCCAGGAATCA
GAGCTGCCACTGAGGTACGGAGGCGTTTCCACGTGCTTCCGAAAGGAGGC
GGGTGCGCACGGGAAGGACACCTGGGGCATCTTCAGGGTGCACCAGTTCG
AGAAGGTGGAGCAGTTTTGCATCTGCGAGGGAGATCTCGAGAAGAGCGCG
GCTTTGCAGGACGAAATGGTACGGAGGCGTTTCCACGTGCTTCCGAAAGG
AGGCGGGTGCGCACGGGAAGGACACCTGGGGCATCTTCAGGGTGCACCAG
TTCGAGAAGGTGGAGCAGTTTTGCATCTGCGAGGGAGATCTCGAGAAGAG
CGCGGCTTTGCAGGACGAAATGAGTAAGACTGCCGAGGAGTTCTACAAGA
GCCTGGGCCTGTCGTACCGGGTGGTGAACATCGTTTCGGGTGAGCTGAAC
AACGCCGCCATCAAGAAGTACGACCTGGAGGCATGGTTTCCGGCGTACGA
GGAGTTCCGAGAGCTTGTCTCGTGCTCCAACTGCACCGACTACCAGAGTA
AGACTGCCGAGGAGTTCTACAAGAGCCTGGGCCTGTCGTACCGGGTGGTG
AACATCGTTTCGGGTGAGCTGAACAACGCCGCCATCAAGAAGTACGACCT
GGAGGCATGGTTTCCGGCGTACGAGGAGTTCCGAGAGCTTGTCTCGTGCT
CCAACTGCACCGACTACCAGAGCCGAGCGATGGAAATTCGCTCCGGCCAG
AAGAAGATGGGCCAGCAGGACAAGAAGTACGTGCACATGCTCAACTCCAC
GCTGTGTGCAACTACCCGCACCATCTCCTGCATCCTGGAGAACTACCAGA
CCTCTACGGGCGTGACGGTACCCGAGAGCCGAGCGATGGAAATTCGCTCC
GGCCAGAAGAAGATGGGCCAGCAGGACAAGAAGTACGTGCACATGCTCAA
CTCCACGCTGTGTGCAACTACCCGCACCATCTCCTGCATCCTGGAGAACT
ACCAGACCTCTACGGGCGTGACGGTACCCGAGGTTCTGGTGCCCTACATG
GGCGGCATGACCTTCCTGGACTACGTGAAGGAGCTCCCGAAGTCTAAGCG
AGAGGCCAAGGGTTCTACCAAGGGCGGATACGCCACCACCAAGAAGTCAA
CCCCGACCCCCAAAAAAACTACCGCTGCCGCCGCTCCCTTGGCCAACGGG
GGAGGAGCCGCGCCCGAATCTACTTCGCGTGGGTTGCCGGGAGTTGGCGA
CGGCGGAAGCGATATCGATTCCATCGCCAAGAAAATCGTAGCAAAGGTTC
TGGTGCCCTACATGGGCGGCATGACCTTCCTGGACTACGTGAAGGAGCTC
CCGAAGTCTAAGCGAGAGGCCAAGGGTTCTACCAAGGGCGGATACGCCAC
CACCAAGAAGTCAACCCCGACCCCCAAAAAAACTACCGCTGCCGCCGCTC
CCTTGGCCAACGGGGGAGGAGCCGCGCCCGAATCTACTTCGCGTGGGTTG
CCGGGAGTTGGCGACGGCGGAAGCGATATCGATTCCATCGCCAAGAAAAT
CGTAGCAAAGGGTCTGGAGATTCGTGACCTAAAGAAATCCAAGCCGGATA
AGGCAGCCCTTCAACCTCACGTGGACAACTTGCTGTCCCTCAAGGCAGAG
TACAAGAGCAAGAGTGGCAAGGACTACTCGCCTTCTCCTGGGGTCTCTGC
TGCCGCTCAGCCCCCAAAGGCAATGGCACCGGTTAAGGCAGGGGCTGTTT
CGGTGGAATCCCCGGGAGTGGGCGCGCCCTCGGAATCCCCGGCGGTCGTG
GAACTCCGCGCCAAGATCGCCGCCAAGGGTCTGGAGATTCGTGACCTAAA
GAAATCCAAGCCGGATAAGGCAGCCCTTCAACCTCACGTGGACAACTTGC
TGTCCCTCAAGGCAGAGTACAAGAGCAAGAGTGGCAAGGACTACTCGCCT
TCTCCTGGGGTCTCTGCTGCCGCTCAGCCCCCAAAGGCAATGGCACCGGT
TAAGGCAGGGGCTGTTTCGGTGGAATCCCCGGGAGTGGGCGCGCCCTCGG
AATCCCCGGCGGTCGTGGAACTCCGCGCCAAGATCGCCGCCAAGGGAGAC
GAGATCCGAGAGCTCAAGAAGTCCAAGCCCGACAAGGCCGCTCTCCAGCC
CCTCATTGCCGCCCTGCTCGATCTCAAAGCGGACTACAAGAAGGAGGCGG
GCAAGGACTACGTGGCCTCGGACGCTCCACAGGCTCCAGGGAAGCAGGCC
AAGCCGATTCCGAAGCCATCGTCCGCGAAGGCGCCTGCCGAGCATGGTGC
TGGGAAGAAGGCGCCCAAGCCGGCGGCGCGAAAAAGTGGGAGACGAGATC
CGAGAGCTCAAGAAGTCCAAGCCCGACAAGGCCGCTCTCCAGCCCCTCAT
TGCCGCCCTGCTCGATCTCAAAGCGGACTACAAGAAGGAGGCGGGCAAGG
ACTACGTGGCCTCGGACGCTCCACAGGCTCCAGGGAAGCAGGCCAAGCCG
ATTCCGAAGCCATCGTCCGCGAAGGCGCCTGCCGAGCATGGTGCTGGGAA
GAAGGCGCCCAAGCCGGCGGCGCGAAAAAGTGCGCCTGCAGCGGTGCCAG
GCGTGGGCCGTGACCTTCCCCCAACCCCCGCTGCGAAGGGGTCCGTGATA
GAGAATGGAAAACCCAACTTGGATAATCTCGCACGGCACCTGCTGGATTT
TTCTTACGTTGCAGGCGAGCGCCTGCAGCGGTGCCAGGCGTGGGCCGTGA
CCTTCCCCCAACCCCCGCTGCGAAGGGGTCCGTGATAGAGAATGGAAAAC
CCAACTTGGATAATCTCGCACGGCACCTGCTGGATTTTTCTTACGTTGCA
GGCGAG
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