prot_H-elongata_contig10074.67.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10074.67.1
Unique Nameprot_H-elongata_contig10074.67.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length597
Homology
BLAST of mRNA_H-elongata_contig10074.67.1 vs. uniprot
Match: D8LMJ1_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMJ1_ECTSI)

HSP 1 Score: 551 bits (1421), Expect = 9.300e-185
Identity = 367/594 (61.78%), Postives = 424/594 (71.38%), Query Frame = 0
Query:    6 PQVFSKSLDSETGYWFYENQATGERCWDRPLEGVAPFQPAQPHMEDLIEDQAREHRQRLEREKRLQHIHLRRCILDKQLLAKVERDNTDGSQRVQGLWDEAEKQAARKDGRLSIAWQELPGVSEEHLFGFHTKYG-MRLTTLQLVGLGLAEVPSAIGQHLWSLKSLSFSSNVLRELPDGLCALTDLTDLNLVRNRLISLPERFGILLRLRHLSLAGNRQITRLTKIPPSFGNLVRLDRVILDCNCLRRLPESLGYMRCRVFNVNNNKLAGLPHCFKDMPRLATLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNMVYPPPEVVREGCDRVRGWCLRRLHDRVHARQHNIVIAIQDILKQITSRGLGIPAFFEPDVHIGDNKN-DRYYALIYERLWDTMLPALEREWEVGAAAPGGTVTYFSYDRVEVDRVLQDYRDPTGRVLRTHTQMFRRCACVGADGKRRVCVPPKVGWMCERNATLIKHDVVLKRDQEDRRQTQRECDDIKFRVGFARRLVKDNSETIEGKNTYMRKAIKTAEAIKRKKEVGGVPS 597
            PQ FSK +D ETGYWFYEN ATGER WDRPLEGVAP +P  P  ++ + D AR  RQR ERE R + + +RR   DK LL + +      ++RVQGLWDEAE+ AARK+G  S+AW+++P VSE H+FGF  + G  ++  L+LVGLGL EVP AIGQ+L SLKSLS SSN L E+PDGLC LT L                                                                   G M+CR  NV+NNKLAGLPHC KDMPRL  +S  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX N+MVYPP EV+ +GCDRVR WC RR+HDRV ARQH IV+A+QDILKQI  RGLG PAFFEPDV +G N+  D +YAL+YER WDTMLPALEREW+ G AAP G VT F Y R EVD VL DYRDPTGRVLRT TQMFRRC C+GA+G+RRVCVPPKVGWMCER ATLIKHD++L+R+QE+RR+   E +DI+FRV  ARRLVK+ SETIEGK  Y +KAI+ AEA+K+KK++G   S
Sbjct:   29 PQAFSKHVDPETGYWFYENLATGERHWDRPLEGVAPLRPKSPRPDEKLVDDARHKRQRSERESRRKDMAIRRVQFDKLLLEEGKSAEIKEAERVQGLWDEAEQHAARKEGDFSLAWKQVPSVSESHIFGFPERNGGTKIVNLRLVGLGLTEVPGAIGQNLLSLKSLSLSSNALEEIPDGLCDLTALXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRMKCRWLNVSNNKLAGLPHCLKDMPRLTKISAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNDMVYPPKEVILQGCDRVRAWCYRRMHDRVIARQHTIVMAVQDILKQIHERGLGHPAFFEPDVEVGMNEGTDHFYALVYERFWDTMLPALEREWQTGTAAPRGAVTSFGYSREEVDSVLLDYRDPTGRVLRTKTQMFRRCGCMGANGRRRVCVPPKVGWMCERKATLIKHDIILEREQEERRRQATEREDIEFRVTLARRLVKEGSETIEGKKNYTKKAIRMAEALKKKKQMGDFES 618          
BLAST of mRNA_H-elongata_contig10074.67.1 vs. uniprot
Match: A0A6H5KAI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAI0_9PHAE)

HSP 1 Score: 347 bits (891), Expect = 6.450e-107
Identity = 162/233 (69.53%), Postives = 193/233 (82.83%), Query Frame = 0
Query:  362 NNMVYPPPEVVREGCDRVRGWCLRRLHDRVHARQHNIVIAIQDILKQITSRGLGIPAFFEPDVHIGDNKN-DRYYALIYERLWDTMLPALEREWEVGAAAPGGTVTYFSYDRVEVDRVLQDYRDPTGRVLRTHTQMFRRCACVGADGKRRVCVPPKVGWMCERNATLIKHDVVLKRDQEDRRQTQRECDDIKFRVGFARRLVKDNSETIEGKNTYMRKAIKTAEAIKRKKEVG 593
            N+MVYPP E++ +GCDRVR WC RR+HDRV ARQH IV+ +QDILKQI  RGLG PAFFEPDV +G N+  D +YAL+YER WDTMLPALEREW+ G A P G VT F Y R EVD VL DYRDPTGRVLRT TQMFRRC C+GA+G+RRVCVPPKVGWMCER ATLIKHD++L+R+QE+RR+   E +DI+FRV  ARRLVK+ SETIEGK +Y +KAI+ AEA+K+KK++G
Sbjct:   81 NDMVYPPKEIILQGCDRVRAWCHRRMHDRVSARQHTIVMTVQDILKQIHERGLGHPAFFEPDVEVGMNEGTDHFYALVYERFWDTMLPALEREWQTGTAVPRGAVTSFGYSREEVDSVLLDYRDPTGRVLRTKTQMFRRCGCMGANGRRRVCVPPKVGWMCERKATLIKHDIILEREQEERRRQATEREDIEFRVALARRLVKEGSETIEGKKSYTKKAIRMAEALKKKKQMG 313          
BLAST of mRNA_H-elongata_contig10074.67.1 vs. uniprot
Match: A0A7S4A2F7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A2F7_9STRA)

HSP 1 Score: 149 bits (377), Expect = 4.000e-34
Identity = 146/513 (28.46%), Postives = 213/513 (41.52%), Query Frame = 0
Query:   79 ILDKQLLAKVERDNTDGSQRVQGLWDEAEKQA---ARKDGRLSIAWQELPGVSEEHLFGFHTKYGMRLTTLQLVGLGLAEVPSAIGQHLWSLKSLSFSSNVLRELPDGLCALTDLTDLNLVRNRLISLPERFGILLRLRHLSLAGNRQITRLTKIPPSFGNLVRLDRVILDCNCLRRLPESLGYMRCRVFNVNNNKLAGLPHCFKDMPRLATLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNN--MVYPPPEVVREGCDRVRGWCLRRLHDRVHARQHNIVIAIQDILKQI--TSRGLGIPAFFEPDVHIGDNKNDRYYALIYERLWDTMLPALEREWEVGAAAPGGTVTYFSYDRVEVDRVLQDYRDPTGRV-LRTHTQMFRRCACVGADGKRRVCVPPKVGWMCERNATLIKHDVVLKRDQEDRRQTQRECDDIKFRVGFARRLVKDNSETIEGKNTYMRKAIKTA 583
            I +K  + K  RD  + ++  + L+D+    A   AR+ G L++   +  G   + ++ FH  YG  L  L+ V  GL   P   G+ L  L  L+ +SN L ELPD +C L                                                                     L  M C   + N+NKL  LP C  +M  L  LSXXXXXXXXXXXXXXXXXXXX                                                     N  M YP P+ + +G + VR W  +R    + AR+H +V  +QD ++Q       +    +FE  V   +     ++ +++++ WD MLP L   W          VT   + R EV +VL+DY+D  G+V ++    MF+RC CV ADG ++VCVPPK GWMC+R A L K  V+L+R++    + +RE   I+  V  AR        + EG   + ++A+K A
Sbjct:  179 IKEKHAVGKRRRDE-EAARAARALFDKRWGDAFEFAREAGELNML-NKGAGDFPDQIYDFHENYGRPLKALRFVAHGLDRFPERAGKELTQLTQLTLASNRLTELPDSICDLAXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRMTCHTLSFNHNKLVALPRCLANMINLTALSXXXXXXXXXXXXXXXXXXXXTVKLCANIIEELPESISRLPRLKSLWLDHNAPMAALPWNFYMLTSLVELRMDANPGMKYPTPDTLLQGAEAVRNWFRKRQKQALFARKHRVVATMQDFMEQCGEVRPSIAHQGYFEAGV---ERSGAVWFQVVWDKFWDEMLPGLRDAW-AEKRVDKHRVTAMPFSRSEVQKVLEDYKDAEGKVYMKDQVCMFKRCRCVDADGNKKVCVPPKPGWMCKRRADLFKCRVILQREKRMMDERKREEAAIQQAVENARVAATAFCHSEEGIQRFRKRAVKRA 681          
BLAST of mRNA_H-elongata_contig10074.67.1 vs. uniprot
Match: A0A7S3MDR4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MDR4_9STRA)

HSP 1 Score: 139 bits (351), Expect = 8.330e-31
Identity = 86/219 (39.27%), Postives = 117/219 (53.42%), Query Frame = 0
Query:  364 MVYPPPEVVREGCDRVRGWCLR-RLHDRVHARQHNIVIAIQDILKQITSRGLGIPAFFEPDVHIGDNKNDRYYALIYERLWDTMLPALEREWEVGAAAPG-----------GTVTYFSYDRVEVDRVLQDYRDPTGRVLRTHTQMFRRCACVGADGKRRVCVPPKVGWMCERNATLIKHDVVLKRDQEDRRQTQRECD---DIKFRVGFARRLVKDNSE 567
            M+ PPPEV+ +G   V  +     L+D+V AR   +V+A Q++LKQI  R     A+FEPD    D   DR++AL    LW  +LP L+R WE   AA G             +T F Y   EV   L +Y D  G VLR    MFRRCACV ++ KRR CVPP  G+MC R+  L+K ++V +RD+ DR     + D   D   R  +  +L  D++E
Sbjct:  218 MLDPPPEVMGQGGPAVVAYLKAIYLNDKV-ARMREVVLATQNVLKQIQERDFADSAYFEPDYQRTDKDLDRWFALQLPYLWKDLLPQLKRTWESERAAMGHHRRHKHAAASDDLTSFDYSEQEVMHALTNYSDAVGPVLRMQKAMFRRCACVDSEMKRRPCVPPAPGYMCLRDCVLLKKELVRERDKHDRMWQAYKSDGMRDAMKRADYEAKLYLDSAE 435          
BLAST of mRNA_H-elongata_contig10074.67.1 vs. uniprot
Match: A0A7S2D150_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D150_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 2.990e-15
Identity = 44/116 (37.93%), Postives = 67/116 (57.76%), Query Frame = 0
Query:  465 VTYFSYDRVEVDRVLQDYRDPTGRVLRTHTQ-MFRRCACVGADGKRRVCVPPKVGWMCERNATLIKHDVVLKRDQEDRRQTQRECDDIKFRVGFARRLVKDNSETIEGKNTYMRKA 579
            V  F ++R EVD V++ + DP G V  T+   +FRRC CV   GKRRVCVPPK GWMC+R A L K ++ L+ +++ R   + +  +++     A    +   E+ EG+  + R A
Sbjct:   25 VKSFPFERTEVDHVMKTFVDPYGPVSMTNEDTLFRRCCCVDESGKRRVCVPPKKGWMCKRTAFLFKMEICLETEKKARELKKAQEKEVESAGIAAETFARTYCESDEGQIYFRRLA 140          
BLAST of mRNA_H-elongata_contig10074.67.1 vs. uniprot
Match: A0A7S2CY75_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CY75_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 3.790e-6
Identity = 23/43 (53.49%), Postives = 33/43 (76.74%), Query Frame = 0
Query:  226 RLTKIPPSFGNLVRLDRVILDCNCLRRLPESLGYMRCRVFNVN 268
            +LT++P SFGNL+ L+RV+L+ N L RLPES G ++C   N+N
Sbjct:    5 QLTELPTSFGNLILLERVVLEANHLTRLPESTGRLQCSYLNLN 47          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10074.67.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LMJ1_ECTSI9.300e-18561.78Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KAI0_9PHAE6.450e-10769.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4A2F7_9STRA4.000e-3428.46Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3MDR4_9STRA8.330e-3139.27Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S2D150_9STRA2.990e-1537.93Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2CY75_9STRA3.790e-653.49Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 50..70
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 142..272
coord: 245..376
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 141..366
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 210..236
e-value: 150.0
score: 3.5
coord: 164..187
e-value: 3.5
score: 16.6
coord: 282..305
e-value: 6.3
score: 14.9
coord: 306..328
e-value: 23.0
score: 10.3
coord: 237..260
e-value: 31.0
score: 9.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 261..376
e-value: 8.2E-24
score: 85.9
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 77..260
e-value: 6.3E-24
score: 86.1
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 307..363
e-value: 6.7E-7
score: 29.0
coord: 142..200
e-value: 1.9E-6
score: 27.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10074contigH-elongata_contig10074:1099..8059 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10074.67.1mRNA_H-elongata_contig10074.67.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10074 1099..8059 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10074.67.1 ID=prot_H-elongata_contig10074.67.1|Name=mRNA_H-elongata_contig10074.67.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=597bp
MLSLSPQVFSKSLDSETGYWFYENQATGERCWDRPLEGVAPFQPAQPHME
DLIEDQAREHRQRLEREKRLQHIHLRRCILDKQLLAKVERDNTDGSQRVQ
GLWDEAEKQAARKDGRLSIAWQELPGVSEEHLFGFHTKYGMRLTTLQLVG
LGLAEVPSAIGQHLWSLKSLSFSSNVLRELPDGLCALTDLTDLNLVRNRL
ISLPERFGILLRLRHLSLAGNRQITRLTKIPPSFGNLVRLDRVILDCNCL
RRLPESLGYMRCRVFNVNNNKLAGLPHCFKDMPRLATLSVVNNGLRSLPS
DIGDSKSITSLHLATNRLSQLPDGICRLKSLKVLWLDHNLIAGLPMKFHE
LENLNGLFLEQNNMVYPPPEVVREGCDRVRGWCLRRLHDRVHARQHNIVI
AIQDILKQITSRGLGIPAFFEPDVHIGDNKNDRYYALIYERLWDTMLPAL
EREWEVGAAAPGGTVTYFSYDRVEVDRVLQDYRDPTGRVLRTHTQMFRRC
ACVGADGKRRVCVPPKVGWMCERNATLIKHDVVLKRDQEDRRQTQRECDD
IKFRVGFARRLVKDNSETIEGKNTYMRKAIKTAEAIKRKKEVGGVPS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt