prot_H-elongata_contig108167.664.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig108167.664.1
Unique Nameprot_H-elongata_contig108167.664.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length236
Homology
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 2.310e-31
Identity = 84/249 (33.73%), Postives = 129/249 (51.81%), Query Frame = 0
Query:    1 MFLKVVDGEAEMVGVVHVDDILTRNREKATMDRFAAELGQKFKLKDMVDARYYMGCHITRNRKARELKINPHLYVEPMTTS-------SVPT-----LSNADEPRNLDKEEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYG-GQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLRQV 236
            +F  + +G   +  VVHVDDI +   E+   D+F  +L     +K++ D R+Y GC   R+  A  LKI+   Y E +           +P      LS  D+      EE+  +P+ E +  LMW AT TR  IA+ +RAV ++C +P   H +  + I+ Y++   D  I +  G    L ME +    + S    R SVSG ++M   G ISW+SR  +     T+++EYV+L++ +KEVLFLRQV
Sbjct:  107 VFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQD-----EEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQV 349          
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 2.680e-31
Identity = 83/249 (33.33%), Postives = 129/249 (51.81%), Query Frame = 0
Query:    1 MFLKVVDGEAEMVGVVHVDDILTRNREKATMDRFAAELGQKFKLKDMVDARYYMGCHITRNRKARELKINPHLYVEPMTTS-------SVPT-----LSNADEPRNLDKEEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYG-GQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLRQV 236
            +F  + +G   +  VVHVDDI +   E+   D+F  +L    ++K++ D  +Y GC   R+  A  LKI+   Y E +           +P      LS  D+      EE+  +P+ E +  LMW AT TR  IA+ +RAV ++C +P   H +  + I+ Y++   D  I +  G    L ME +    + S    R SVSG ++M   G ISW+SR  +     T+++EYV+L++ +KEVLFLRQV
Sbjct:    6 VFRLIEEGRVVVTLVVHVDDIFSIGEEER-YDQFGRDLNTMVRVKNLGDLIWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGMKLSEFDQD-----EEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDSGITFRRGSIAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQV 248          
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 1.130e-30
Identity = 84/249 (33.73%), Postives = 129/249 (51.81%), Query Frame = 0
Query:    1 MFLKVVDGEAEMVGVVHVDDILTRNREKATMDRFAAELGQKFKLKDMVDARYYMGCHITRNRKARELKINPHLYVEPMTTS-------SVPT-----LSNADEPRNLDKEEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYG-GQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLRQV 236
            +F  + +G   +  VVHVDDI +   E+   D+F  +L     +K++ D R+Y GC   R+  A  LKI+   Y E +           +P      LS  D+      EE+  +P+ E +  LMW AT TR  IA+ +RAV ++C +P   H +  + I+ Y++   D  I +  G    L ME +    + S    R SVSG ++M   G ISW+SR  +     T+++EYV+L++ +KEVLFLRQV
Sbjct:  281 VFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQD-----EEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQV 523          
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 1.940e-30
Identity = 84/249 (33.73%), Postives = 129/249 (51.81%), Query Frame = 0
Query:    1 MFLKVVDGEAEMVGVVHVDDILTRNREKATMDRFAAELGQKFKLKDMVDARYYMGCHITRNRKARELKINPHLYVEPMTTS-------SVPT-----LSNADEPRNLDKEEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYG-GQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLRQV 236
            +F  + +G   +  VVHVDDI +   E+   D+F  +L     +K++ D R+Y GC   R+  A  LKI+   Y E +           +P      LS  D+      EE+  +P+ E +  LMW AT TR  IA+ +RAV ++C +P   H +  + I+ Y++   D  I +  G    L ME +    + S    R SVSG ++M   G ISW+SR  +     T+++EYV+L++ +KEVLFLRQV
Sbjct:  802 VFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQD-----EEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQV 1044          
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A6H5L0Z9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Z9_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 4.220e-27
Identity = 77/231 (33.33%), Postives = 119/231 (51.52%), Query Frame = 0
Query:   19 DDILTRNREKATMDRFAAELGQKFKLKDMVDARYYMGCHITRNRKARELKINPHLYVEPMTTS-------SVPT-----LSNADEPRNLDKEEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYG-GQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLRQV 236
            DDI +   E+   D+F  +L     +K++ D R+Y GC   R+  A  LKI+   Y E +           +P      LS  D+      EE+  +P+ E +  LMW AT TR  IA+ +RAV ++C +P   H +  + I+ Y++   +  I +  G    L ME +    + S    R SVSG ++M   G ISW+SR  +     T+++EYV+L++ +KEVLFLRQV
Sbjct:   66 DDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQD-----EEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHCRAGLGILGYVVRTSELGITFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQV 290          
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A0A9Z683_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Z683_LYGHE)

HSP 1 Score: 117 bits (293), Expect = 2.000e-26
Identity = 73/235 (31.06%), Postives = 130/235 (55.32%), Query Frame = 0
Query:   16 VHVDDILTRNREKATMDRFAAELGQKFKLKDMVDARYYMGCHITRNRKARELKINPHLYVE------------PMTTSSVPT--LSNADEPRNLD-KEEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYGG-QSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLR 234
            V VDD+L  + +K       ++L + FK+ D+ +A++ +G  I+R+R+ +++ ++   Y++            P  T   P   LS   +P + D ++++   PY EAV  L++ + + R  IA  +  V +F  NPGPAH   V +I++Y+    DW ++Y G +S+E+    Y    F S +D R SV+G V ++  G++SW ++    TA  T+++EY+ LS A +E L+LR
Sbjct: 1032 VWVDDLLIFSDDKKLTQEVKSQLMKCFKMTDIGEAKFVLGFQISRDRERKKIWMDQRAYIDNVLIRFGMENCNPAATPLDPNIKLSKDQQPSSPDERKKMEAIPYQEAVGSLLFASQVCRPDIAFAVSLVSRFNSNPGPAHWAAVKRILRYMKGTSDWKLEYDGTKSSEI--TGYCDSDFASDVDERKSVTGYVFLMCDGSVSWGTKKQPTTALSTTEAEYMALSAATQEALWLR 1264          
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A6H5KD60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD60_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 2.590e-26
Identity = 72/206 (34.95%), Postives = 108/206 (52.43%), Query Frame = 0
Query:   44 LKDMVDARYYMGCHITRNRKARELKINPHLYVEPMTTSS---------VPT---LSNADEPRNLDKEEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYG-GQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLRQV 236
            +K++ D R+Y GC   R+  AR LKI+   Y + +              P    LS  D+      EE+  +P+ E +  LMW AT TR  IA+  RAV ++C +P   H +  + I+ Y++   D  I +G G    L ME +    + S    R SVSG  +M  +G ISW+SR  +     T+++EYV+L++ +KEVLFLRQV
Sbjct:    4 VKNLGDLRWYSGCVYERDWDARILKISQQTYAQELGMDFGVEYGKEILFPVGLKLSEFDQD-----EEVVSWPFRELIGSLMWLATQTRPNIANAARAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFGRGSVAGLSMEVFADADYASKAADRRSVSGGFVMCGRGCISWFSRTQQCVTLSTTEAEYVSLADVMKEVLFLRQV 204          
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A151SYU6_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SYU6_CAJCA)

HSP 1 Score: 114 bits (286), Expect = 3.120e-26
Identity = 73/250 (29.20%), Postives = 131/250 (52.40%), Query Frame = 0
Query:    1 MFLKVVDGEAEMVGVVHVDDILTRNREKATMDRFAAELGQKFKLKDMVDARYYMGCHITRNRKARELKINPHLYVEPM-------TTSSVPT-------LSNADEPRN-LDKEEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYGGQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLRQ 235
            +F+K    +  ++ +++VDD+L   ++ + +DR   +LG+ F +KDM  A+  +G  I R+R+  +L ++   Y++ +          +V T       LS    P N  +K ++ + PY  AV  LM+    TR YIA  +  V +F  NPG  H  +V  I++YL    D  + +GG    L    Y+       +D+R S SG ++  A GA++W SR+       T+++E++ ++EA KE+L+L++
Sbjct:   72 VFVKKFSNDDFIILLLYVDDMLIVRKDVSRIDRLKKKLGESFAMKDMGAAKQILGIRIIRDREKWKLWLSQEQYIKRVLQRFQIENAKAVSTPFATHFKLSVKQSPSNKAEKLDMERVPYASAVGSLMYAMVCTRPYIAHAVGTVSRFLSNPGREHWNSVKWILRYLHGTVDMKLCFGGDKPTL--VGYSDSDMAGDVDSRKSTSGYLIKFAGGAVAWQSRLQRCVTLSTTEAEFIAITEACKELLWLKK 319          
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY)

HSP 1 Score: 116 bits (290), Expect = 5.110e-26
Identity = 76/245 (31.02%), Postives = 130/245 (53.06%), Query Frame = 0
Query:    7 DGEAEMVGVVHVDDILTRNREKATMDRFAAELGQKFKLKDMVDARYYMGCHITRNRKARELKINPHLYVEPMTTS---------SVPT-----LSNADEPRNLDK-EEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYGGQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLRQV 236
            +GE+ ++    VDD LT       +D FA ++ Q+F++ D+ D  + +G  + R+R+AR + I+   Y++ + +          S+P      L N   P    + E++R  PY EAV  LM+ A  TR  I   + A+ +F +NPG AH   + ++++YL   ++  + YG  +N   +  Y+   + S  + R S+SG V  L  GAISW S+   V A  ++++EY+ L+ A KE ++LR V
Sbjct: 1216 EGESAIIVAASVDD-LTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIPLQPGSPLGNHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDITFAVTALSQFMQNPGRAHWDALKRVLRYLKGSRELWLVYG--TNNEGLRGYSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHATKEAIWLRYV 1457          
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A1Y1IVX6_KLENI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IVX6_KLENI)

HSP 1 Score: 115 bits (289), Expect = 6.560e-26
Identity = 72/245 (29.39%), Postives = 124/245 (50.61%), Query Frame = 0
Query:    1 MFLKVVDGEAEMVGVVHVDDILTRNREKATMDRFAAELGQKFKLKDMVDARYYMGCHITRNRKARELKINPHLY---------VEPMTTSSVPTLSNADEPRNLDKEEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYGGQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLRQV 236
            +F  V+DGE   V VV VDDIL   + +  + +  A L +KF ++D+  A Y++G  +TR+R+AR +K+              +E     S P  S     R  D  +  K+PY E V  L++ +  TR  IA  + A+ ++   P   H +  + + +YL    +  + +GG +  L    Y    +   +D+R S +G V ++  GA SW SR+    A+ T ++EY++ + A KE L+L+++
Sbjct:  741 LFTGVIDGERVWV-VVWVDDILIAAKGEQRLAKVKAHLSEKFDVRDLGPAEYFLGMELTRDRRARTIKLTQKKLTKELLGRYGLEAAKARSTPLSSGEKLQREGDPLDTGKYPYSELVGSLLYLSVCTRPDIAQAVGALARYMAGPTEEHWRAALGVARYLSGTAELGVTFGGSAEPL--VGYADADYAGDVDSRRSTTGYVFLVYGGAASWSSRLQPTVAASTVEAEYMSAASAAKEALWLKKL 982          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLN0_9PHAE2.310e-3133.73Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KR24_9PHAE2.680e-3133.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQB8_9PHAE1.130e-3033.73Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K2R1_9PHAE1.940e-3033.73Integrase catalytic domain-containing protein n=3 ... [more]
A0A6H5L0Z9_9PHAE4.220e-2733.33Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0A9Z683_LYGHE2.000e-2631.06Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5KD60_9PHAE2.590e-2634.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A151SYU6_CAJCA3.120e-2629.20Retrovirus-related Pol polyprotein from transposon... [more]
A0A2G8RWY5_9APHY5.110e-2631.02Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
A0A1Y1IVX6_KLENI6.560e-2629.39Integrase catalytic domain-containing protein (Fra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig108167contigH-elongata_contig108167:338..1084 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig108167.664.1mRNA_H-elongata_contig108167.664.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig108167 77..1084 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig108167.664.1 ID=prot_H-elongata_contig108167.664.1|Name=mRNA_H-elongata_contig108167.664.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=236bp
MFLKVVDGEAEMVGVVHVDDILTRNREKATMDRFAAELGQKFKLKDMVDA
RYYMGCHITRNRKARELKINPHLYVEPMTTSSVPTLSNADEPRNLDKEEI
RKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQ
YLLYKKDWAIKYGGQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGA
ISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLRQV
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