prot_H-elongata_contig108132.662.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig108132.662.1
Unique Nameprot_H-elongata_contig108132.662.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length78
Homology
BLAST of mRNA_H-elongata_contig108132.662.1 vs. uniprot
Match: A0A2I4CWC1_9TELE (crooked neck-like protein 1 n=1 Tax=Austrofundulus limnaeus TaxID=52670 RepID=A0A2I4CWC1_9TELE)

HSP 1 Score: 122 bits (305), Expect = 3.070e-34
Identity = 51/77 (66.23%), Postives = 64/77 (83.12%), Query Frame = 0
Query:    1 MRSKFPNHARNVWDRAVALLPRVDQFWYKYSYMEEMLGNPAKARAIFERWMEWEPEDNAWSAYVKFEMRQEEPTKAR 77
            M+S+  NHARN+WDRA+ +LPRV+QFWYKY+YMEEMLGN A  R +FERWMEWEPE+ AW +Y+ FE+R +E  KAR
Sbjct:    3 MKSRQVNHARNIWDRAITILPRVNQFWYKYTYMEEMLGNVAGCRQVFERWMEWEPEEQAWHSYINFELRYKEVDKAR 79          
BLAST of mRNA_H-elongata_contig108132.662.1 vs. uniprot
Match: A0A183KDF0_9TREM (Uncharacterized protein n=1 Tax=Schistosoma curassoni TaxID=6186 RepID=A0A183KDF0_9TREM)

HSP 1 Score: 119 bits (297), Expect = 1.500e-29
Identity = 52/77 (67.53%), Postives = 62/77 (80.52%), Query Frame = 0
Query:    1 MRSKFPNHARNVWDRAVALLPRVDQFWYKYSYMEEMLGNPAKARAIFERWMEWEPEDNAWSAYVKFEMRQEEPTKAR 77
            MR K  NHARN+WDRAV L+PR +QFWYKY+YMEE LGN A AR IFERWMEW+PE+ AW AY+ FE+R +E  +AR
Sbjct:    3 MRHKQVNHARNLWDRAVTLMPRANQFWYKYTYMEETLGNVAGARQIFERWMEWQPEEQAWHAYINFELRYKEMDRAR 79          
BLAST of mRNA_H-elongata_contig108132.662.1 vs. uniprot
Match: UPI000719E0EE (crooked neck-like protein 1 n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719E0EE)

HSP 1 Score: 118 bits (295), Expect = 3.170e-29
Identity = 48/72 (66.67%), Postives = 60/72 (83.33%), Query Frame = 0
Query:    1 MRSKFPNHARNVWDRAVALLPRVDQFWYKYSYMEEMLGNPAKARAIFERWMEWEPEDNAWSAYVKFEMRQEE 72
            M++K  NH RN+WDRA+ +LPR +QFWYKY+YMEEMLGN A AR +FERWMEWEPE+ AW  Y+KFE+R +E
Sbjct:    1 MKNKQVNHTRNIWDRAITILPRANQFWYKYTYMEEMLGNVAGARQVFERWMEWEPEEQAWQTYIKFELRYKE 72          
BLAST of mRNA_H-elongata_contig108132.662.1 vs. uniprot
Match: A0A0M3IR76_ASCLU (Uncharacterized protein n=1 Tax=Ascaris lumbricoides TaxID=6252 RepID=A0A0M3IR76_ASCLU)

HSP 1 Score: 110 bits (274), Expect = 4.030e-28
Identity = 46/76 (60.53%), Postives = 58/76 (76.32%), Query Frame = 0
Query:    2 RSKFPNHARNVWDRAVALLPRVDQFWYKYSYMEEMLGNPAKARAIFERWMEWEPEDNAWSAYVKFEMRQEEPTKAR 77
            R+K  NHARN+WDRAV +LPR  QFW KYSYMEE++GN   AR +FERW+EWEP + AW  Y+ FE+R +E  +AR
Sbjct:   71 RNKQVNHARNIWDRAVTILPRATQFWLKYSYMEELIGNLPGARQVFERWIEWEPPEQAWQTYINFELRYKETDRAR 146          
BLAST of mRNA_H-elongata_contig108132.662.1 vs. uniprot
Match: A0A3P6FYJ1_BRAOL (Uncharacterized protein n=1 Tax=Brassica oleracea TaxID=3712 RepID=A0A3P6FYJ1_BRAOL)

HSP 1 Score: 105 bits (262), Expect = 3.360e-27
Identity = 47/72 (65.28%), Postives = 55/72 (76.39%), Query Frame = 0
Query:    1 MRSKFPNHARNVWDRAVALLPRVDQFWYKYSYMEEMLGNPAKARAIFERWMEWEPEDNAWSAYVKFEMRQEE 72
            M++KF N AR+VWDRAV LLPRVD  WYKYS+MEEMLGN A AR IFERWM W P+   W ++ KFE+R  E
Sbjct:    1 MKNKFVNSARHVWDRAVYLLPRVDLLWYKYSHMEEMLGNIAGARQIFERWMNWSPDQQGWLSFAKFELRYNE 72          
BLAST of mRNA_H-elongata_contig108132.662.1 vs. uniprot
Match: A0A2G9HXZ8_9LAMI (Cell cycle control protein (Crooked neck) n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9HXZ8_9LAMI)

HSP 1 Score: 104 bits (260), Expect = 1.870e-24
Identity = 44/69 (63.77%), Postives = 54/69 (78.26%), Query Frame = 0
Query:    1 MRSKFPNHARNVWDRAVALLPRVDQFWYKYSYMEEMLGNPAKARAIFERWMEWEPEDNAWSAYVKFEMR 69
            M++KF NHARN+WDRA  LLP VDQ WYK  +MEEMLGN A AR I+ERWM+W P+   W +Y+KFE+R
Sbjct:  110 MKNKFVNHARNIWDRATELLPTVDQLWYKSIHMEEMLGNVAGARQIYERWMKWMPDPQGWLSYIKFELR 178          
BLAST of mRNA_H-elongata_contig108132.662.1 vs. uniprot
Match: A0A1X7U4V8_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U4V8_AMPQE)

HSP 1 Score: 96.7 bits (239), Expect = 6.130e-24
Identity = 40/59 (67.80%), Postives = 49/59 (83.05%), Query Frame = 0
Query:    1 MRSKFPNHARNVWDRAVALLPRVDQFWYKYSYMEEMLGNPAKARAIFERWMEWEPEDNA 59
            M++K  NHARN+WDR V LLPR++QFW+KY+YMEE LGN   AR +FERWMEWEPE+ A
Sbjct:    3 MKNKQINHARNIWDRVVTLLPRINQFWFKYAYMEEKLGNIPNARRVFERWMEWEPEEQA 61          
BLAST of mRNA_H-elongata_contig108132.662.1 vs. uniprot
Match: UPI0003C46AA3 (crooked neck-like protein 1 isoform X1 n=2 Tax=Myotis lucifugus TaxID=59463 RepID=UPI0003C46AA3)

HSP 1 Score: 99.8 bits (247), Expect = 1.190e-23
Identity = 41/59 (69.49%), Postives = 51/59 (86.44%), Query Frame = 0
Query:    1 MRSKFPNHARNVWDRAVALLPRVDQFWYKYSYMEEMLGNPAKARAIFERWMEWEPEDNA 59
            M+++  NHARN+WDRA+  LPRV+QFWYKY+YMEEMLGN A AR +FERWMEW+PE+ A
Sbjct:    3 MKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEEQA 61          
BLAST of mRNA_H-elongata_contig108132.662.1 vs. uniprot
Match: A0A1B6HCS7_9HEMI (Uncharacterized protein (Fragment) n=1 Tax=Homalodisca liturata TaxID=320908 RepID=A0A1B6HCS7_9HEMI)

HSP 1 Score: 99.8 bits (247), Expect = 2.010e-23
Identity = 42/59 (71.19%), Postives = 51/59 (86.44%), Query Frame = 0
Query:    1 MRSKFPNHARNVWDRAVALLPRVDQFWYKYSYMEEMLGNPAKARAIFERWMEWEPEDNA 59
            MR++  NHARN+WDRAV +LPR +QFWYKY+YMEEMLGN A AR +FERWMEWEP++ A
Sbjct:   30 MRNRQVNHARNLWDRAVTILPRANQFWYKYTYMEEMLGNIAGARQVFERWMEWEPDEQA 88          
BLAST of mRNA_H-elongata_contig108132.662.1 vs. uniprot
Match: A0A3P6PHP6_9BILA (Uncharacterized protein n=2 Tax=Gongylonema pulchrum TaxID=637853 RepID=A0A3P6PHP6_9BILA)

HSP 1 Score: 95.9 bits (237), Expect = 5.160e-23
Identity = 40/66 (60.61%), Postives = 49/66 (74.24%), Query Frame = 0
Query:   12 VWDRAVALLPRVDQFWYKYSYMEEMLGNPAKARAIFERWMEWEPEDNAWSAYVKFEMRQEEPTKAR 77
            +WDRAV  LPR  QFW KYSYMEE++GN   AR +FERWMEWEP + AW  Y+ FE+R +E  +AR
Sbjct:    1 MWDRAVTTLPRATQFWLKYSYMEELIGNVPGARQVFERWMEWEPPEQAWQTYINFELRYKELDRAR 66          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig108132.662.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2I4CWC1_9TELE3.070e-3466.23crooked neck-like protein 1 n=1 Tax=Austrofundulus... [more]
A0A183KDF0_9TREM1.500e-2967.53Uncharacterized protein n=1 Tax=Schistosoma curass... [more]
UPI000719E0EE3.170e-2966.67crooked neck-like protein 1 n=1 Tax=Priapulus caud... [more]
A0A0M3IR76_ASCLU4.030e-2860.53Uncharacterized protein n=1 Tax=Ascaris lumbricoid... [more]
A0A3P6FYJ1_BRAOL3.360e-2765.28Uncharacterized protein n=1 Tax=Brassica oleracea ... [more]
A0A2G9HXZ8_9LAMI1.870e-2463.77Cell cycle control protein (Crooked neck) n=1 Tax=... [more]
A0A1X7U4V8_AMPQE6.130e-2467.80Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
UPI0003C46AA31.190e-2369.49crooked neck-like protein 1 isoform X1 n=2 Tax=Myo... [more]
A0A1B6HCS7_9HEMI2.010e-2371.19Uncharacterized protein (Fragment) n=1 Tax=Homalod... [more]
A0A3P6PHP6_9BILA5.160e-2360.61Uncharacterized protein n=2 Tax=Gongylonema pulchr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 4..36
e-value: 0.0011
score: 28.2
coord: 38..69
e-value: 3.4E-5
score: 33.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..77
e-value: 7.4E-20
score: 73.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..73
NoneNo IPR availablePANTHERPTHR11246PRE-MRNA SPLICING FACTORcoord: 1..77
NoneNo IPR availablePANTHERPTHR11246:SF3CROOKED NECK-LIKE PROTEIN 1coord: 1..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig108132contigH-elongata_contig108132:1442..2090 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig108132.662.1mRNA_H-elongata_contig108132.662.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig108132 1412..2090 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig108132.662.1 ID=prot_H-elongata_contig108132.662.1|Name=mRNA_H-elongata_contig108132.662.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=78bp
MRSKFPNHARNVWDRAVALLPRVDQFWYKYSYMEEMLGNPAKARAIFERW
MEWEPEDNAWSAYVKFEMRQEEPTKAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003107HAT
IPR011990TPR-like_helical_dom_sf