prot_H-elongata_contig108091.660.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig108091.660.1
Unique Name	prot_H-elongata_contig108091.660.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	97

Homology

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BLAST of mRNA_H-elongata_contig108091.660.1 vs. uniprot
Match: D7FHC8_ECTSI (Coatomer subunit gamma n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHC8_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 7.780e-47
Identity = 87/97 (89.69%), Postives = 94/97 (96.91%), Query Frame = 0

Query:    1 MFLSSVKPALKFGTMRTLSDVAAKYPMSIIKCNTDMEVLISDPNRSIATLAITTLLKTGSESSVDRLMKQISSFMNEIADEFKIVVVKAIRQVTWRF 97
            MFL+SVKPALKFGTMRTLS+VAAKYPMSI+KCN+DMEVLISDPNRSIATLAITTLLKTGSE SVDRLMKQISSFMNEIADEFKIVVVKAIRQ+  ++
Sbjct:  183 MFLTSVKPALKFGTMRTLSEVAAKYPMSILKCNSDMEVLISDPNRSIATLAITTLLKTGSEGSVDRLMKQISSFMNEIADEFKIVVVKAIRQLCLKY 279

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BLAST of mRNA_H-elongata_contig108091.660.1 vs. uniprot
Match: A0A836CC02_9STRA (Coatomer subunit gamma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC02_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.110e-38
Identity = 74/97 (76.29%), Postives = 85/97 (87.63%), Query Frame = 0

Query:    1 MFLSSVKPALKFGTMRTLSDVAAKYPMSIIKCNTDMEVLISDPNRSIATLAITTLLKTGSESSVDRLMKQISSFMNEIADEFKIVVVKAIRQVTWRF 97
            +FLSS KP L+FG MRTLSDVA  +PM+I+KCN +ME LISD NRSIATLAITTLLKTG+E SVDRLMKQIS+FMNEIADEFKI+VV AIRQ+  R+
Sbjct:  317 LFLSSPKPTLRFGAMRTLSDVAGTHPMAIVKCNEEMETLISDANRSIATLAITTLLKTGTEGSVDRLMKQISTFMNEIADEFKIIVVHAIRQLCLRY 413

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BLAST of mRNA_H-elongata_contig108091.660.1 vs. uniprot
Match: A0A7S3YI27_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YI27_HETAK)

HSP 1 Score: 137 bits (345), Expect = 1.570e-36
Identity = 66/97 (68.04%), Postives = 84/97 (86.60%), Query Frame = 0

Query:    1 MFLSSVKPALKFGTMRTLSDVAAKYPMSIIKCNTDMEVLISDPNRSIATLAITTLLKTGSESSVDRLMKQISSFMNEIADEFKIVVVKAIRQVTWRF 97
            +FLSS KP L+F  MR LS+VA K+P+S++KCN DME LI+DPNRSIATLAITTLLKTG+E  VDRLMKQIS+FM EIADEF+++VV++IRQ+  ++
Sbjct:  154 LFLSSPKPTLRFAAMRCLSEVALKHPISVVKCNEDMEALIADPNRSIATLAITTLLKTGTEGGVDRLMKQISAFMGEIADEFRVLVVRSIRQLCLKY 250

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BLAST of mRNA_H-elongata_contig108091.660.1 vs. uniprot
Match: A0A6U1MSQ3_9STRA (Coatomer subunit gamma n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MSQ3_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.600e-36
Identity = 68/97 (70.10%), Postives = 84/97 (86.60%), Query Frame = 0

Query:    1 MFLSSVKPALKFGTMRTLSDVAAKYPMSIIKCNTDMEVLISDPNRSIATLAITTLLKTGSESSVDRLMKQISSFMNEIADEFKIVVVKAIRQVTWRF 97
            +FLSS KP L+F  MR LS+VA ++P+S++KCN DME LI+DPNRSIATLAITTLLKTGSE SVDRLMKQISSFM EIADEFK++V+ +IRQ+  ++
Sbjct:  321 LFLSSPKPTLRFVAMRCLSEVAIRHPLSVVKCNEDMEALIADPNRSIATLAITTLLKTGSEGSVDRLMKQISSFMGEIADEFKVIVISSIRQLCLKY 417

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BLAST of mRNA_H-elongata_contig108091.660.1 vs. uniprot
Match: A0A7S2CJE5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CJE5_9STRA)

HSP 1 Score: 131 bits (329), Expect = 2.250e-35
Identity = 65/83 (78.31%), Postives = 75/83 (90.36%), Query Frame = 0

Query:    1 MFLSSVKPALKFGTMRTLSDVAAKYPMSIIKCNTDMEVLISDPNRSIATLAITTLLKTGSESSVDRLMKQISSFMNEIADEFK 83
            +FLSS KP L++  MR LS+V+ ++PM+I+KCN DME LISDPNRSIATLAITTLLKTGSESSVDRLMKQI+SFMNEIADEFK
Sbjct:  225 LFLSSPKPTLRYAAMRCLSEVSMRHPMAIVKCNDDMEALISDPNRSIATLAITTLLKTGSESSVDRLMKQINSFMNEIADEFK 307

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BLAST of mRNA_H-elongata_contig108091.660.1 vs. uniprot
Match: A0A452YGG4_AEGTS (Adaptin_N domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452YGG4_AEGTS)

HSP 1 Score: 130 bits (326), Expect = 2.650e-35
Identity = 65/97 (67.01%), Postives = 83/97 (85.57%), Query Frame = 0

Query:    1 MFLSSVKPALKFGTMRTLSDVAAKYPMSIIKCNTDMEVLISDPNRSIATLAITTLLKTGSESSVDRLMKQISSFMNEIADEFKIVVVKAIRQVTWRF 97
            +FLSS KP L+F  +RTL+ VA+ +P+++  CN DME LISD NRSIATLAITTLLKTG+ESSVDRLMKQ+++FM++IADEFKIVVV+AIR +  +F
Sbjct:   30 LFLSSSKPVLRFAAVRTLNKVASTHPLAVTNCNIDMESLISDQNRSIATLAITTLLKTGNESSVDRLMKQMTNFMSDIADEFKIVVVEAIRSLCLKF 126

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BLAST of mRNA_H-elongata_contig108091.660.1 vs. uniprot
Match: A0A803PHN8_CANSA (Adaptin_N domain-containing protein n=2 Tax=rosids TaxID=71275 RepID=A0A803PHN8_CANSA)

HSP 1 Score: 134 bits (338), Expect = 3.710e-35
Identity = 68/97 (70.10%), Postives = 83/97 (85.57%), Query Frame = 0

Query:    1 MFLSSVKPALKFGTMRTLSDVAAKYPMSIIKCNTDMEVLISDPNRSIATLAITTLLKTGSESSVDRLMKQISSFMNEIADEFKIVVVKAIRQVTWRF 97
            +FLSS KP L+F  +RTL+ VA  +PM++  CN DME LISDPNRSIATLAITTLLKTG+ESSVDRLMKQI++FM++IADEFKIVVV+AIR +  +F
Sbjct:  299 LFLSSSKPVLRFAAVRTLNKVAMTHPMAVTNCNIDMESLISDPNRSIATLAITTLLKTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKF 395

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BLAST of mRNA_H-elongata_contig108091.660.1 vs. uniprot
Match: W9R165_9ROSA (Coatomer subunit gamma n=3 Tax=Rosales TaxID=3744 RepID=W9R165_9ROSA)

HSP 1 Score: 134 bits (337), Expect = 1.670e-34
Identity = 68/97 (70.10%), Postives = 83/97 (85.57%), Query Frame = 0

Query:    1 MFLSSVKPALKFGTMRTLSDVAAKYPMSIIKCNTDMEVLISDPNRSIATLAITTLLKTGSESSVDRLMKQISSFMNEIADEFKIVVVKAIRQVTWRF 97
            +FLSS KP L+F  +RTL+ VA  +PM++  CN D+E LISDPNRSIATLAITTLLKTG+ESSVDRLMKQI++FM+EIADEFKIVVV+AIR +  +F
Sbjct:  319 LFLSSSKPVLRFAAVRTLNKVAMTHPMAVTNCNIDIESLISDPNRSIATLAITTLLKTGNESSVDRLMKQITNFMSEIADEFKIVVVEAIRSLCLKF 415

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BLAST of mRNA_H-elongata_contig108091.660.1 vs. uniprot
Match: A0A445E3K4_ARAHY (Uncharacterized protein n=1 Tax=Arachis hypogaea TaxID=3818 RepID=A0A445E3K4_ARAHY)

HSP 1 Score: 134 bits (336), Expect = 2.360e-34
Identity = 68/97 (70.10%), Postives = 83/97 (85.57%), Query Frame = 0

Query:    1 MFLSSVKPALKFGTMRTLSDVAAKYPMSIIKCNTDMEVLISDPNRSIATLAITTLLKTGSESSVDRLMKQISSFMNEIADEFKIVVVKAIRQVTWRF 97
            +FLSS KP L+F  +RTL+ VA K+PM++  CN DME LISD NRSIATLAITTLLKTG+ESSVDRLMKQI++FM++IADEFKIVVV+AIR +  +F
Sbjct: 1180 LFLSSSKPVLRFAAVRTLNKVAMKHPMAVTNCNIDMESLISDQNRSIATLAITTLLKTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKF 1276

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BLAST of mRNA_H-elongata_contig108091.660.1 vs. uniprot
Match: S8FZ63_TOXGM (Coatomer gamma subunit n=1 Tax=Toxoplasma gondii (strain ATCC 50611 / Me49) TaxID=508771 RepID=S8FZ63_TOXGM)

HSP 1 Score: 127 bits (320), Expect = 4.430e-34
Identity = 62/97 (63.92%), Postives = 82/97 (84.54%), Query Frame = 0

Query:    1 MFLSSVKPALKFGTMRTLSDVAAKYPMSIIKCNTDMEVLISDPNRSIATLAITTLLKTGSESSVDRLMKQISSFMNEIADEFKIVVVKAIRQVTWRF 97
            +F SS KPAL+F  +RTL+ V+ K+P ++  CN D+E LI+D NRSIATLAITTLLKTG+ESSV+RLMKQIS+F+NEI+DEFK+VV++AIR +  R+
Sbjct:  159 LFCSSPKPALRFAAVRTLNKVSVKHPQAVTSCNVDLEQLITDQNRSIATLAITTLLKTGAESSVERLMKQISTFVNEISDEFKVVVIEAIRSLCSRY 255

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig108091.660.1 vs. uniprot

BLAST of mRNA_H-elongata_contig108091.660.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FHC8_ECTSI	7.780e-47	89.69	Coatomer subunit gamma n=2 Tax=Ectocarpus TaxID=28...	[more]
A0A836CC02_9STRA	1.110e-38	76.29	Coatomer subunit gamma n=1 Tax=Tribonema minus Tax...	[more]
A0A7S3YI27_HETAK	1.570e-36	68.04	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A6U1MSQ3_9STRA	1.600e-36	70.10	Coatomer subunit gamma n=1 Tax=Fibrocapsa japonica...	[more]
A0A7S2CJE5_9STRA	2.250e-35	78.31	Hypothetical protein (Fragment) n=1 Tax=Florenciel...	[more]
A0A452YGG4_AEGTS	2.650e-35	67.01	Adaptin_N domain-containing protein n=1 Tax=Aegilo...	[more]
A0A803PHN8_CANSA	3.710e-35	70.10	Adaptin_N domain-containing protein n=2 Tax=rosids...	[more]
W9R165_9ROSA	1.670e-34	70.10	Coatomer subunit gamma n=3 Tax=Rosales TaxID=3744 ...	[more]
A0A445E3K4_ARAHY	2.360e-34	70.10	Uncharacterized protein n=1 Tax=Arachis hypogaea T...	[more]
S8FZ63_TOXGM	4.430e-34	63.92	Coatomer gamma subunit n=1 Tax=Toxoplasma gondii (...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002553	Clathrin/coatomer adaptor, adaptin-like, N-terminal	PFAM	PF01602	Adaptin_N	coord: 2..95 e-value: 1.0E-20 score: 73.8
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1..97 e-value: 4.1E-11 score: 44.1
IPR017106	Coatomer gamma subunit	PANTHER	PTHR10261	COATOMER SUBUNIT GAMMA	coord: 1..97
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 2..94

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig108091	contig	H-elongata_contig108091:759..1874 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig108091.660.1	mRNA_H-elongata_contig108091.660.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig108091 759..1886 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig108091.660.1 ID=prot_H-elongata_contig108091.660.1|Name=mRNA_H-elongata_contig108091.660.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=97bp
MFLSSVKPALKFGTMRTLSDVAAKYPMSIIKCNTDMEVLISDPNRSIATL
AITTLLKTGSESSVDRLMKQISSFMNEIADEFKIVVVKAIRQVTWRF

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002553	Clathrin/coatomer_adapt-like_N
IPR011989	ARM-like
IPR017106	Coatomer_gsu
IPR016024	ARM-type_fold