prot_H-elongata_contig10802.656.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10802.656.1
Unique Nameprot_H-elongata_contig10802.656.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length761
Homology
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BLAST of mRNA_H-elongata_contig10802.656.1 vs. uniprot
Match: D8LTI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTI3_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 1.830e-57
Identity = 124/213 (58.22%), Postives = 146/213 (68.54%), Query Frame = 0 
Query:  500 EKINGAKSKGN--PTAEAVAERYIPPGRRKVMDA-----ATMNADG---AEEWKGPLWSSRAPIRVRQKERPSDGQTSPTR-PAPARVAGVVCGGMSAYGASISEYSEEMSRGQVEMCTALITNFPSALPPGQRELMLQAFFTLGALITWARHDEALATFATPALARQAISAKSNHSSVLKVELLSSLSIEKRKGYHRIELSRPGRPPADVSS 701
            E + G K +    P  +  A RY+PPGRRK +DA     A   + G   A +  GPLW+SRAP+RV Q+ERPSD   SP R PAPARVA VV GGMSAYG +ISEYSEEMSR QVE CTA+++NFP ALPPGQR+ MLQ+F +LG L+ W R DEAL TFATPALARQA+SA++N  SVL VELLS   +EKR GY R        P  DV S
Sbjct:  335 ENVTGDKKEDQELPAFKPPAARYVPPGRRKALDAELAAAADSGSSGGAAAGDGMGPLWTSRAPVRVSQRERPSDRDASPARRPAPARVAHVVSGGMSAYGTNISEYSEEMSREQVEACTAVVSNFPVALPPGQRDSMLQSFVSLGGLVVWPRPDEALVTFATPALARQAVSARNNRDSVLFVELLSQARVEKRTGYRRGGAFLSKNPKLDVKS 547
[Close]
BLAST of mRNA_H-elongata_contig10802.656.1 vs. uniprot
Match: A0A6H5JL83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL83_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 9.590e-54
Identity = 121/204 (59.31%), Postives = 145/204 (71.08%), Query Frame = 0 
Query:  500 EKINGAKSKGN--PTAEAVAERYIPPGRRKVMDA-----ATMNADG---AEEWKGPLWSSRAPIRVRQKERPSDGQTSP-TRPAPARVAGVVCGGMSAYGASISEYSEEMSRGQVEMCTALITNFPSALPPGQRELMLQAFFTLGALITWARHDEALATFATPALARQAISAKSNHSSVLKVELLSSLSIEKRKGYHRIELSRP 692
            E + G K++    P  +  A RY+PPGRRK +DA     A   + G   A +  GPLW+SRAP+RV Q+ERPSD   SP +RPAPARVA VV GGMSAYG +ISEYSEEMSR QVE CTA+++NFP ALPPGQR+ MLQ+  +LG L+ W R DEAL TFATPALARQA+SA++N  SVL VELLS   +EKR GY R   S P
Sbjct:  335 ENVTGDKNEDQELPAFKPPAARYVPPGRRKALDAELAAAADSGSSGGAAAGDGMGPLWTSRAPVRVSQRERPSDRDASPASRPAPARVAHVVSGGMSAYGTNISEYSEEMSREQVEACTAVVSNFPVALPPGQRDSMLQSLVSLGGLVVWPRPDEALVTFATPALARQAVSARNNRDSVLLVELLSLARLEKRTGYRRGNDSPP 538
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10802.656.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTI3_ECTSI1.830e-5758.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JL83_9PHAE9.590e-5459.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10802contigH-elongata_contig10802:2099..5263 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10802.656.1mRNA_H-elongata_contig10802.656.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10802 1153..5296 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10802.656.1 ID=prot_H-elongata_contig10802.656.1|Name=mRNA_H-elongata_contig10802.656.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=761bp
MSDRVSNSRRPRAQKSPYVPPGARGGRRAESIAATPPSGANTSLVFKGED
GGARHAGGATENRGISSGGFKKETKKSTDDRFRLKSAGGEARATIAVALV
ETKATRLAKASEGQLNGSVPSTREEGVKGQDSAREEVIPSLESNSRSCLQ
LSPKAIEDDEAADRDLTQPRSTEHRRDLGSQQSRRKRRREWSPYEPPGRR
VGSYSYSSPPRNGEESAGRLDAELAAASLLPANVANETRAPAEPTARVPA
TGQHTTQVSVARAEKLHGPTAPEEPSCSQERAGPERREPADIGMAVVIRS
GGEEVEIDNVLTATATQTVEIPPSSHPETATNISTYPTEAQQNKAPATGN
AVLGANQTLCVSPTGCSSSLERSLRISQEDNAVEDREILAGPLGESTREG
GIGSGNDHGVLWGVRASMAQAGEDRPRSLHIDEAPPEQLYVEEEEKGSST
CDVNASAGGGGSPVTELDTTRKPIVEGTIKVESSARNSDCDPTDPTNAGE
KINGAKSKGNPTAEAVAERYIPPGRRKVMDAATMNADGAEEWKGPLWSSR
APIRVRQKERPSDGQTSPTRPAPARVAGVVCGGMSAYGASISEYSEEMSR
GQVEMCTALITNFPSALPPGQRELMLQAFFTLGALITWARHDEALATFAT
PALARQAISAKSNHSSVLKVELLSSLSIEKRKGYHRIELSRPGRPPADVS
SASRLISGALGLRRSRAQLLGSTTVAGTVNSGRRSKSGARGKERGARSAP
VTECTDSWDM*
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