prot_H-elongata_contig107887.644.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig107887.644.1
Unique Nameprot_H-elongata_contig107887.644.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length51
Homology
BLAST of mRNA_H-elongata_contig107887.644.1 vs. uniprot
Match: D8LHW4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHW4_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 4.070e-14
Identity = 37/51 (72.55%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    1 MAEAAVRDKIYEYKANSNLVLTAENRDRRRGDEGTGEVESLYGRLGKKRMG 51
            MAE AVR+KI+EYKANSNLVLTA+   RRRG+EGTGEVESL+GR+  ++MG
Sbjct:    1 MAEDAVRNKIFEYKANSNLVLTADRDSRRRGEEGTGEVESLHGRMKGQKMG 51          
BLAST of mRNA_H-elongata_contig107887.644.1 vs. uniprot
Match: A0A8J2SIM1_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SIM1_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 5.370e-11
Identity = 33/51 (64.71%), Postives = 40/51 (78.43%), Query Frame = 0
Query:    1 MAEAAVRDKIYEYKANSNLVLTAENRDRRRGDEGTGEVESLYGRLGKKRMG 51
            MAE   R++ YEY+ANSNLVL A+   RRR DE TGEVESL+GR+G +RMG
Sbjct:    1 MAEEFARNRQYEYRANSNLVLEADRETRRRTDEPTGEVESLWGRMGAQRMG 51          
BLAST of mRNA_H-elongata_contig107887.644.1 vs. uniprot
Match: F0Y9C7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9C7_AURAN)

HSP 1 Score: 63.5 bits (153), Expect = 1.870e-10
Identity = 31/51 (60.78%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    1 MAEAAVRDKIYEYKANSNLVLTAENRDRRRGDEGTGEVESLYGRLGKKRMG 51
            MAE   R++ YEY+ANSNLVL A+  +RRR DE TGEVESL+G++G ++MG
Sbjct:    1 MAEEFARNRQYEYRANSNLVLEADRENRRRTDEPTGEVESLFGKMGGQKMG 51          
BLAST of mRNA_H-elongata_contig107887.644.1 vs. uniprot
Match: A0A835YNN3_9STRA (Sec63 Brl domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNN3_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.500e-8
Identity = 31/51 (60.78%), Postives = 40/51 (78.43%), Query Frame = 0
Query:    1 MAEAAVRDKIYEYKANSNLVLTAENRDRRRGDEGTGEVESLYGRLGKKRMG 51
            MAE   R++ +EYKANSNLVL AE R +RRG++GTGEVESL+G+    +MG
Sbjct:    1 MAEEHARNRQFEYKANSNLVLQAE-RGKRRGEDGTGEVESLWGKTKHMKMG 50          
BLAST of mRNA_H-elongata_contig107887.644.1 vs. uniprot
Match: A0A482RM62_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RM62_9ARCH)

HSP 1 Score: 54.3 bits (129), Expect = 9.030e-8
Identity = 30/51 (58.82%), Postives = 34/51 (66.67%), Query Frame = 0
Query:    1 MAEAAVRDKIYEYKANSNLVLTAENRDRRRGDEGTGEVESLYGRLGKKRMG 51
            MA+  +R K+YEY ANSNLVL AE    RR D G GEVE+L GR    RMG
Sbjct:    1 MADEFLRSKLYEYGANSNLVLEAERDGSRRKDAGKGEVETLRGRTNTFRMG 51          
BLAST of mRNA_H-elongata_contig107887.644.1 vs. uniprot
Match: A0A2C9JJQ4_BIOGL (Uncharacterized protein n=3 Tax=Euthyneura TaxID=216307 RepID=A0A2C9JJQ4_BIOGL)

HSP 1 Score: 53.1 bits (126), Expect = 8.760e-7
Identity = 31/53 (58.49%), Postives = 35/53 (66.04%), Query Frame = 0
Query:    1 MAEAAVRDKIYEYKANSNLVLTAENR--DRRRGDEGTGEVESLYGRLGKKRMG 51
            MA+A  R   YEYKANSNLVL+ +    DRR  DE TGEV SL G+L   RMG
Sbjct:    1 MADATARSLQYEYKANSNLVLSVDRTLIDRRARDEATGEVMSLVGKLTNTRMG 53          
BLAST of mRNA_H-elongata_contig107887.644.1 vs. uniprot
Match: A0A7J7JY94_BUGNE (SNRNP200 n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7JY94_BUGNE)

HSP 1 Score: 52.4 bits (124), Expect = 9.370e-7
Identity = 32/53 (60.38%), Postives = 35/53 (66.04%), Query Frame = 0
Query:    1 MAEAAVRDKIYEYKANSNLVLTAENR--DRRRGDEGTGEVESLYGRLGKKRMG 51
            MA+AA R   YEYKANSNLVLTA+     RR  DE TGEV SL G +   RMG
Sbjct:    1 MADAAARQLQYEYKANSNLVLTADRSLSSRRDKDEATGEVLSLQGHIRGTRMG 53          
BLAST of mRNA_H-elongata_contig107887.644.1 vs. uniprot
Match: A0A2T7PAU9_POMCA (Uncharacterized protein n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7PAU9_POMCA)

HSP 1 Score: 52.0 bits (123), Expect = 2.240e-6
Identity = 31/53 (58.49%), Postives = 35/53 (66.04%), Query Frame = 0
Query:    1 MAEAAVRDKIYEYKANSNLVLTAENR--DRRRGDEGTGEVESLYGRLGKKRMG 51
            MA+A  R   YEYKANSNLVL+ +    DRR  DE TGEV SL G+L   RMG
Sbjct:    1 MADATARSLQYEYKANSNLVLSVDRSLIDRRARDEATGEVMSLTGKLQGTRMG 53          
BLAST of mRNA_H-elongata_contig107887.644.1 vs. uniprot
Match: A0A1Y2GAS0_9FUNG (Sec63 Brl domain-domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GAS0_9FUNG)

HSP 1 Score: 52.0 bits (123), Expect = 2.240e-6
Identity = 28/52 (53.85%), Postives = 34/52 (65.38%), Query Frame = 0
Query:    1 MAEAAVRDKIYEYKANSNLVLTAENRDR-RRGDEGTGEVESLYGRLGKKRMG 51
            MA+   +D+ Y+Y  NSNLVL A   D  RRG+E TGE ESLYGR+  K  G
Sbjct:    1 MADKIAKDQQYQYALNSNLVLQANRSDNPRRGNEPTGEAESLYGRIDPKEFG 52          
BLAST of mRNA_H-elongata_contig107887.644.1 vs. uniprot
Match: A0A2P6N243_9EUKA (Pre-mRNA-splicing helicase BRR2 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N243_9EUKA)

HSP 1 Score: 51.6 bits (122), Expect = 3.070e-6
Identity = 27/51 (52.94%), Postives = 33/51 (64.71%), Query Frame = 0
Query:    1 MAEAAVRDKIYEYKANSNLVLTAENRDRRRGDEGTGEVESLYGRLGKKRMG 51
            M+E + R K+++YKANSNLVL    R  R  D  TGEV SL G+L   RMG
Sbjct:    1 MSEKSARSKLFDYKANSNLVLQQTERGPRENDGATGEVHSLAGKLTGSRMG 51          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig107887.644.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHW4_ECTSI4.070e-1472.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8J2SIM1_9STRA5.370e-1164.71Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]
F0Y9C7_AURAN1.870e-1060.78Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A835YNN3_9STRA1.500e-860.78Sec63 Brl domain-containing protein n=1 Tax=Tribon... [more]
A0A482RM62_9ARCH9.030e-858.82Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A2C9JJQ4_BIOGL8.760e-758.49Uncharacterized protein n=3 Tax=Euthyneura TaxID=2... [more]
A0A7J7JY94_BUGNE9.370e-760.38SNRNP200 n=1 Tax=Bugula neritina TaxID=10212 RepID... [more]
A0A2T7PAU9_POMCA2.240e-658.49Uncharacterized protein n=2 Tax=Pomacea canalicula... [more]
A0A1Y2GAS0_9FUNG2.240e-653.85Sec63 Brl domain-domain-containing protein n=1 Tax... [more]
A0A2P6N243_9EUKA3.070e-652.94Pre-mRNA-splicing helicase BRR2 n=1 Tax=Planoproto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig107887contigH-elongata_contig107887:274..1340 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig107887.644.1mRNA_H-elongata_contig107887.644.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig107887 274..1453 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig107887.644.1 ID=prot_H-elongata_contig107887.644.1|Name=mRNA_H-elongata_contig107887.644.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=51bp
MAEAAVRDKIYEYKANSNLVLTAENRDRRRGDEGTGEVESLYGRLGKKRM
G
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