mRNA_H-elongata_contig10775.638.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig10775.638.1
Unique NamemRNA_H-elongata_contig10775.638.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig10775.638.1 vs. uniprot
Match: A0A6H5K8T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T1_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 1.790e-20
Identity = 87/315 (27.62%), Postives = 127/315 (40.32%), Query Frame = 2 
Query:  641 GRRMTVCRSKRSTYL*SLGFFYPCPGDMNKACVRTASWGHIEEYLVLMRLPLNPTHKTLARFDAFERLREEWGVVAKWEFKVGSPPHGLVERLVASCHAIGNVVMDTCWRRGACFVCHEASLDAAGG--YFALALQFTPSTTSNTPTAGTLVVQAFGNREGRALWGALRFVISAAWDIFQEFPGLRWEAWVECPEHGQLQHYLPCVNDREEMSPARPIIRPRERPNCGCPKGVASRLGTVLQRSPEWGPSPLEVVFNTGDEGRQHAQSFDDDGERRFTAALDITLKAPQETPIVDEASESEG------WRTPEWV 1561
            GRR  +  S RST           P D++ +           + LV+MRL           FD          V  KWEF    PP+GL+ERL+ASCH +G V    CWR GA F  H+          ++ +AL    S TS   +      + FG  +   +W A+R+V SA  ++ +E+PG+ W  W++C +H     Y+    +     P  P   P  R  C C        G VL+ + E     L  V +TG +               F    D   + P+ET   +   E+ G      WRT +W+
Sbjct:  458 GRRTLLAHSDRSTPT--------APSDVSGS----------NDMLVIMRLSETCNEHQRTLFDGLASKMPRDRVTLKWEFDKAGPPYGLIERLIASCHVLGEVETGACWRYGAVFQSHDMRFVEGRNVRFYKIAL----SMTSYNESERVFTAKVFGPLDSERVWVAIRYVASAMINLSKEWPGVLWTGWLDCEKHPSQHLYMASSVEARVGDPLLPAAAPDAR-RCDC----LLEPGGVLRLAVE----ELGPVIDTGKDP--------------FEGLSDEDTEDPEETVTCNCVREAFGHWLPHAWRTAKWL 727
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BLAST of mRNA_H-elongata_contig10775.638.1 vs. uniprot
Match: A0A6H5JW02_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW02_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 1.910e-14
Identity = 71/242 (29.34%), Postives = 108/242 (44.63%), Query Frame = 2 
Query:  764 EEYLVLMRLP--LNPTHKTLARFDAFERLREEWGVVAKWEFKVGSPPHGLVERLVASCHAIGNVVMDTCWRRGACFVCHE-ASLDAAGGYFALALQFTPSTTSNTPTAGTLVVQAFGNREGRALWGALRFVISAAWDIFQEFPGLRWEAWVECPEHGQLQHYLPCVNDREEMSP--ARPIIRPRERPNCGCPKGVASRLGTVLQRSPEWGPSPLEVVFNTGDEGRQHAQSFDDDGERRFTAA 1474
            ++ LV+MRLP      H+         R   +  V   W F    PP+GLVER++ASCHA+G V M  CWR GA F     A+ D +   +   +++  S   N      L ++ FG  +   +W ALR+V S+  +I +++PG+ WE W +C    + + Y    +D+  +             R  C C     + L  VL+R        L  V +T     Q   + D +G RR  AA
Sbjct:  629 QDMLVIMRLPETCGAEHELQELISDQMRRHSDREVTLMWRFDSAGPPYGLVERVIASCHAVGVVEMGLCWRYGAVFQSRAMATSDGSDRLYTFVVRY-DSAVGNERRI--LSMRMFGPLQDNRVWAALRWVASSVVNISKDWPGVLWEGWPQCARRHRNRTYF-ATSDKASIGDFLLADAATGATRRGCDCLAVEGTVLRLVLER--------LGKVVDT-----QAPPASDVEGVRRTKAA 853
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BLAST of mRNA_H-elongata_contig10775.638.1 vs. uniprot
Match: D7FVX5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVX5_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 4.210e-13
Identity = 63/206 (30.58%), Postives = 89/206 (43.20%), Query Frame = 2 
Query:  764 EEYLVLMRLPLNPTHKTLARFDAFER-LREEWG---VVAKWEFKVGSPPHGLVERLVASCHAIGNVVMDTCWRRGACFVCHEASLDAAGGY-FALALQFTPSTTSNTPTAGTLVVQAFGNREGRALWGALRFVISAAWDIFQEFPGLRWEAWVECPEHGQLQHYLPCVNDREEMSPARPIIRPRERPN-CGCPKGVASRLGTVLQR 1363
            ++ LV+MRLP               R L E  G   V  KW F      HGLVER++ASCH +G+V    CWR GA F  +  + D    + ++  +++     S       L V  FG      LW ALR+V S+  +    +PG+RWE    C  H + + Y     +     P      PR  PN C C     + +  VL+R
Sbjct:  787 QDMLVIMRLPDTCEENIQGELQELVRDLSERHGGNEVTLKWRFDGAGASHGLVERVIASCHEVGSVRSGLCWRYGAVFQSYARADDGGLNWLYSFVIRYDEEVGSGERV---LAVTMFGPTAEDRLWAALRWVASSVVNTSTGWPGVRWEGGPACAIHARGRMYFKTPIEARIGDPILTDPDPRTAPNVCDCYTTEGNAMRLVLER 989
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BLAST of mRNA_H-elongata_contig10775.638.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 2.470e-9
Identity = 62/190 (32.63%), Postives = 87/190 (45.79%), Query Frame = 2 
Query:  689 SLGFFYPCPGDMNKACVRTASWGHIEEYLVLMRLPLNPTHKTLARFDAFERLREEWGVVAKWEFKVGSPPHGLVERLVASCHAIGNVVMDTCWRRGACFVCHEASLDAAG-GYFALALQFTPSTTSNTPTAGTLVVQAFGNREGRALWGALRFVISAAWDIFQEFPGLRWEAWVECPEHGQLQHYLPCVN 1255
            SLG  +P  GD +   V            VL+RL  N         D F   +      A WE  +G PP G +E+++  C  +G+V   T WR G   + H    D  G G FA+  ++  S+T+N  TA     Q FG+    A W AL +V SA   +  +FPGLRW   ++CP+HG    +   VN
Sbjct:  537 SLGLTFPLEGDPDNGLV------------VLLRLEPNRPASVGEAIDTFCS-KYTPAFSASWEIFLGVPP-GAIEKVLTRCCGLGDV--QTFWRYGV--LVHGGLGDLDGRGIFAVVTEY--SSTNNELTA-----QIFGDISTSAPWVALSYVTSAVSLMLMDFPGLRWNGSLKCPQHGYEMPFATKVN 701
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10775.638.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K8T1_9PHAE1.790e-2027.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW02_9PHAE1.910e-1429.34Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FVX5_ECTSI4.210e-1330.58LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FZA1_ECTSI2.470e-932.63LRR-GTPase of the ROCO family, incomplete sequence... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10775contigH-elongata_contig10775:3427..8987 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score91.3
Seed ortholog evalue1e-15
Seed eggNOG ortholog2880.D7FVX5
Preferred nameSLITRK2
GOsGO:0000902,GO:0000904,GO:0005575,GO:0005623,GO:0005886,GO:0007275,GO:0007399,GO:0007409,GO:0008150,GO:0009653,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0022008,GO:0030030,GO:0030154,GO:0030182,GO:0031175,GO:0031224,GO:0032501,GO:0032502,GO:0032989,GO:0032990,GO:0044087,GO:0044089,GO:0044425,GO:0044464,GO:0048468,GO:0048518,GO:0048522,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0051094,GO:0051128,GO:0051130,GO:0051239,GO:0051240,GO:0051960,GO:0051962,GO:0051963,GO:0051965,GO:0061564,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0120036,GO:0120039,GO:2000026
EggNOG free text desc.positive regulation of synapse assembly
EggNOG OGs2CMPC@1,2QR6C@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons7
Model size3111
Cds size1074
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929607.0660675-UTR-H-elongata_contig10775:3426..38651622929607.0660675-UTR-H-elongata_contig10775:3426..3865Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10775 3427..3865 +
1691679089.1795285-UTR-H-elongata_contig10775:3426..38651691679089.1795285-UTR-H-elongata_contig10775:3426..3865Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10775 3427..3865 +
1622929607.0799453-UTR-H-elongata_contig10775:4362..44981622929607.0799453-UTR-H-elongata_contig10775:4362..4498Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10775 4363..4498 +
1691679089.1933675-UTR-H-elongata_contig10775:4362..44981691679089.1933675-UTR-H-elongata_contig10775:4362..4498Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10775 4363..4498 +
1622929607.0917609-UTR-H-elongata_contig10775:4521..46671622929607.0917609-UTR-H-elongata_contig10775:4521..4667Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10775 4522..4667 +
1691679089.2030857-UTR-H-elongata_contig10775:4521..46671691679089.2030857-UTR-H-elongata_contig10775:4521..4667Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10775 4522..4667 +
1622929607.1712663-UTR-H-elongata_contig10775:7671..89871622929607.1712663-UTR-H-elongata_contig10775:7671..8987Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10775 7672..8987 +
1691679089.273102-UTR-H-elongata_contig10775:7671..89871691679089.273102-UTR-H-elongata_contig10775:7671..8987Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10775 7672..8987 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929607.1072447-CDS-H-elongata_contig10775:4667..46851622929607.1072447-CDS-H-elongata_contig10775:4667..4685Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10775 4668..4685 +
1691679089.2153378-CDS-H-elongata_contig10775:4667..46851691679089.2153378-CDS-H-elongata_contig10775:4667..4685Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10775 4668..4685 +
1622929607.1187737-CDS-H-elongata_contig10775:4702..52271622929607.1187737-CDS-H-elongata_contig10775:4702..5227Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10775 4703..5227 +
1691679089.2275577-CDS-H-elongata_contig10775:4702..52271691679089.2275577-CDS-H-elongata_contig10775:4702..5227Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10775 4703..5227 +
1622929607.1323943-CDS-H-elongata_contig10775:5722..58341622929607.1323943-CDS-H-elongata_contig10775:5722..5834Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10775 5723..5834 +
1691679089.237325-CDS-H-elongata_contig10775:5722..58341691679089.237325-CDS-H-elongata_contig10775:5722..5834Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10775 5723..5834 +
1622929607.1464865-CDS-H-elongata_contig10775:6433..65551622929607.1464865-CDS-H-elongata_contig10775:6433..6555Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10775 6434..6555 +
1691679089.2476938-CDS-H-elongata_contig10775:6433..65551691679089.2476938-CDS-H-elongata_contig10775:6433..6555Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10775 6434..6555 +
1622929607.1580338-CDS-H-elongata_contig10775:7374..76711622929607.1580338-CDS-H-elongata_contig10775:7374..7671Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10775 7375..7671 +
1691679089.263801-CDS-H-elongata_contig10775:7374..76711691679089.263801-CDS-H-elongata_contig10775:7374..7671Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10775 7375..7671 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10775.638.1prot_H-elongata_contig10775.638.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig10775 4668..7671 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig10775.638.1

>prot_H-elongata_contig10775.638.1 ID=prot_H-elongata_contig10775.638.1|Name=mRNA_H-elongata_contig10775.638.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=358bp
MNKACVRTASWGHIEEYLVLMRLPLNPTHKTLARFDAFERLREEWGVVAK
WEFKVGSPPHGLVERLVASCHAIGNVVMDTCWRRGACFVCHEASLDAAGG
YFALALQFTPSTTSNTPTAGTLVVQAFGNREGRALWGALRFVISAAWDIF
QEFPGLRWEAWVECPEHGQLQHYLPCVNDREEMSPARPIIRPRERPNCGC
PKGVASRLGTVLQRSPEWGPSPLEVVFNTGDEGRQHAQSFDDDGERRFTA
ALDITLKAPQETPIVDEASESEGWRTPEWVKSTLVAGPMGILALYETWVP
LLKVADYWREGALVKAITLTLFAMVLAITVAVAAAAFFKKLRLKYGLWPP
RTNMKND*
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mRNA from alignment at H-elongata_contig10775:3427..8987+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig10775.638.1 ID=mRNA_H-elongata_contig10775.638.1|Name=mRNA_H-elongata_contig10775.638.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5561bp|location=Sequence derived from alignment at H-elongata_contig10775:3427..8987+ (Himanthalia elongata Himel1 dioecious)
TTAAGCATTTAGTCAAAGAGAAGAACAAGCAGTCAAAAAGCGAACATTCT
ACATTTGTGGAAGGTATGAAGCTGGAGTGTGGGATTCAGCTTATTAGCTC
ATCTCCAACTTGTTACTGTGAGAATGGCTTAGCCGATCTCCAGGAGCGGC
TGAAGAAATGTGGAGAGGGTACGCGGTGGTTAATCCCGCCATCGTGGCGT
CTCGCTCTAGTGGTGCTGGATGCCGTTCATGAGGGAATCGACCCAGTAAA
TGCTGCTCGACACCACATGAACTACGAGGACCCGCTCCCAGTCGCATCGT
CGAGTAAATTACGTTGGGTACCCTGGGAGCAGCTTCAGATCGCCTGGAGG
AGCGTTCTAGATTCCCCTAAGCTTAATATTCCGCCGGAGCTCAGACCTGA
CGACTCCGAGTTTGCGCTTCAGAGCGTTATCGGTATGAGGTAAGAGGCTA
CCATAGACATGATGCCTCATGATATTTTCCTTTATTTTGACGAACCGGTG
AAGTTACACTTATTTGCTTCCCATGTCTTGTCCTGAGAATCGTGGATCAC
AAAAAGCAGCTAAGTTTAAACCCATAGGCAAGCTCCCCCCTCCACGAGCC
TGTCTACAGCCGTGGTTGCCGACTTCCACCATGCATTCTTCCGCTCTAAT
CCCAATCACATTATGCTCCCAGAAACTCGTTAAACGTGTGAGATGTTTCT
GAATCAAGCTAGTTGTATGTGGTAGGTTGTTCCCAAGAAAATCATACATT
AAATAGGTATTCTTGTTCGTGCGTAGAACGCAATTAATCTGCCTCACCAT
TTTCCGTAGTTCTCAACAATTTTTGTTATGATATCTTGTGGTGGAGGCCA
CTAACTGGTAAAGGGTTTTACTCTTATCGTTCCACCTCCTCATGTTTTCT
TGTCTTGCAATGCCTTGATTTTTTGTCACCCATCAGAGAACGCGCTGGGT
CGCTTCTGAAGCACCCTGGAGGAGTTTTCTTGGATGTGGAAGATTTCGCT
CTTTCTCTCGCTCCTATTCTTAACCATAAAACACAGCAGAAGGACTCTCG
TGGTGTGGCCGTTTTCGCGGACCGCAAGCTCGACACTCAATGGATGTTAA
ACGCCAGGACGCGACTCGTGAGCATGGGGATACTCGAAAGAAAATTCGCT
CTGGTTTTGTGGAAGAAGAATGACGGTTTGCCGGAGCAAACGTTCGACGT
ACTTGTGAAGCTTGGGATTCTTCTACCCCTGCCCCGGAGACATGAACAAA
GCGTGCGTCGTCCAAGGAACTGGGAGAGAACGGCGTCTTGGGGTCACATA
GAAGAATACTTGGTGTTGATGCGACTGCCGCTAAACCCCACTCATAAGAC
CTTGGCTCGCTTTGATGCCTTCGAAAGGCTTCGAGAAGAGTGGGGGGTGG
TGGCAAAGTGGGAATTCAAGGTAGGAAGTCCTCCTCATGGTCTGGTGGAA
CGGCTCGTGGCATCCTGTCACGCCATCGGTAACGTGGTGATGGACACTTG
CTGGAGGAGAGGTGCTTGCTTTGTCTGTCACGAAGCGAGCTTAGACGCTG
CAGGTGGCTACTTCGCTCTGGCGCTGCAATTCACCCCGAGTACCACATCA
AACACACCGACAGCGGGAACTTTGGTCGTTCAGGCGTTCGGAAATAGAGA
GGGTCGTGCTCTGTGGGGGGCTCTTCGTTTCGTCATTTCAGCCGCTTGGG
ATATATTTCAAGAGTTCCCAGGACTCCGTTGGGAAGCCTGGGTAGAGTGT
CCGGAGCATGGGCAACTGCAGCACTACCTGCCTTGCGTCAACGATCGCGA
GGTTTGCGTTACGTGCTTGATAGCTGTTCAATTCCACTGATTTAACATGT
ATAGTCAGTTCTACGTTAGACATATGATTCTAGAAAGGAATTTTCTAATA
GATATAGTCCGAAATTGATCGAGATATATATGTACAATGTAAACATGTGC
TTTACTTACCTATACCCTCTAAAAAATATACTTACGTGTGACGACTTTGT
GTTCAAAGGTAGTAATGTACACATTCAAACCAGACGATAGTTGGTCCCCT
GGACTGCACCTCTCAAGGCGCTAAGAAGGTGTAGATGTTCGGAGGGTTGG
GATGAGTTCAGTTTTTTTTAATAAGTATGTTATTATGCGTCACATTTACG
ATCAGTTTAAGGGTTTTCACGTTACTGTCCACCTGTTGCCTCCTTTGATC
ATCTGTTCGCTGTTGTCATGTGGCTAAGATATCCACATGATATTTCGACT
GTTTTTTTTCTAATATTCGGTTTGTCTGAATATCTTGCAACTGCAGGAAA
TGTCACCAGCTCGCCCAATAATACGTCCACGTGAAAGGCCAAATTGTGGT
TGCCCGAAAGGCGTGGCATCACGCTTAGGAACAGTGTTGCAGAGATCACC
AGAATGGGGTAAGAAGCGAGATTTCGCGAATATAAGTAATAAAGCCCTCA
AAATGGTCGAATTTATTTGGCGTGGATTTATGTGATACTCACCCCCTCCG
GCCGCCGTAGTACTCACTCCCGCATTCTTCATTAAAGTAGAATATGCCGT
AATTTAAATTATGGTATTCACCACAACATCGCTATATGTAGCATGTCATA
AGCATCTTGCGCAACAAGCCGAAATCTTAACATAGATTCGTCCATGTACC
ACCTGGTGATAATGTTCCTTGATTACAAGATGATGGCAGAAGCACGTACG
CCTGAGAAGCGGGGGGTGTAAGCTGTTGTAATGAAGGTCCCTATGAAACA
CTGGGTCTATCCACCGCCTTTGACGTAATGTTCTTATTAAAAAAACCTTG
AACTCATCCCAACTCTCCAAACATCCACATCTTCTTAGCGCCGTGAGAGG
TGCAATCCAGGGGGCCAACTATCGTCAGGTTTGTCATAAAAATATATATT
TTTTTGTGCGTCCATTTTTACCCAGTATTAGTGTTTTTGTACATCCAATG
ACCGCAAGCCAAAACAATATGATTCACAATAACATGTTTTCAATAATCCC
ATCGTAGGCCCGTCTCCTCTAGAAGTTGTCTTCAACACTGGAGACGAAGG
CAGGCAGCATGCTCAAAGCTTTGATGATGACGGGGAGAGACGGTTCACGG
CGGCTCTCGACATTACTCTTAAAGCACCAGTGAGAATGTGTAAAGGTTTT
GACCTTATATAGGTTGTGTTCTCTTCAATCCCGTACACCTAGATTTGGGT
AAACTTTTGTTGTGATCGCAGGAACAAAACAAGCGAGAAACTTAATGGTT
CTTACTCGATTTTTCTTGGGTTTTTGCCCACACAACGCGGAGGGCAGAGC
AGCTCCAGAGGTATCCTAATGTGTTAGCTCCCGTGAATCTTCTTTGCTCA
GGCCAGCGCTGCTGCTCCAGGCTAGTGTAGCGTTTTCACGAACTTTTTGA
ATATGACATGGCTTGTTTGGGAATATTAGCTCATTTCCGCTCAGAGTCGA
TGCCTCCAACACGCAGATCGTCGATCTTCGTCGATATCGTGTTACGGACA
GCGGTGTGATATAAAGATATAAACAATTATGCTAACGTAGGCCAATTGGA
TGTGCACCGAACAGCCCTATCGTGTCAATTGGTATATTGACGAGTAGTTG
AAGATTGTTCAAGTTTCCCTCAGCGCCAGGAATATGGTGTCGTACACTGG
CATTATTCCGAAGTGCAATGAGTTAACCGAGTATATAGCACATGTAAGGT
CAACCTGCTTAACAGCATTTCTCTGACATAATATAAATAGTTTCGGCGGT
ATCACTGGCCCGGCAACTTTCGCCGACATATGACTCTTGGGCTTTAGTTC
AAAGATAAACAAGGCAACCTCATGGCCCTTAAACTGGCTGGAAATGATGT
CGTTTACTTTGCCAATTTAAATGCAACGTGGATGATCGCCGACCTTTAAT
CGTGTCATCATTGACTTGCCTCCTCATCTATCACTTTAAATATCGCAGCA
AGAAACTCCGATCGTGGACGAAGCAAGCGAAAGCGAGGGGTGGAGGACGC
CTGAGTGGGTGAAAAGTACCTTAGTCGCGGGACCGATGGGAATTCTTGCC
CTTTACGAGACCTGGGTCCCTCTGTTGAAGGTGGCCGATTACTGGCGCGA
GGGTGCGCTTGTAAAGGCTATAACACTTACGTTATTTGCCATGGTTCTGG
CTATCACAGTGGCTGTCGCAGCCGCAGCCTTCTTCAAGAAACTCCGCCTC
AAGTATGGGTTGTGGCCACCTCGAACAAACATGAAGAACGACTAGATACT
ACGAAGATTGGGATCGCTACAAGGAAAACTTATGTATGCCGCCTCTACAG
AGTCGGAGTCGAAGGGGCAAGGGGGATTTAGATGTGGCTACTGATTCGTG
ATCGAGTATGGGGCGTCTTGACTTCCCGATCTGATTGGTTGTTGGACTTG
AAGCGCTACACAATCTTGAGAAATCGAGTCCAAGCCGTGCCCACGGTCCT
CCTGGGGGTGGCGAAAGTCGTATTACTTCCACGTAATCGAAGCGATGCAC
AAACCTGGCGCATTGCCCGAAAGCCGTTAAGGTTAAGGAGTCTTAAGTCT
TGGCTGTGATTGAGGACGAATTTTCCCGGGGCGATTTAGATTATGCGGGC
GCTGATCGCAGCCCAATGTTGTAGTGCAGATATTTCCCCTTGCTTATCAA
TTTGCATTAAACCGCGCAAACCGGCATGACACGTAAAGGGGGCGCCAAGC
CGGTTTGCGAATACTCCCCCCTTATGGGGAGCTATCCCTGGAGACGTTGG
ATAGTTCGCCTCGTACGTTTTCTTTCTTCTAAAAAACATATGAATTCAAC
CAAACCCTTCGAACATCCACACCTTCATTACACCACGAGTGGTCAAGTCA
GGGGGACCAACTATCGAAAGGTTCGAATGTGTGTATTACAGGAAAGTAGG
TCACAATACAGGTACTGTAGTGGTGAGGAAAAGCTTATTAGGGCGGAGAT
GGTAGCGCTGACTAAGCATATACCGGCTGCAGTTGATCCTTTGGCGAATG
CGTCAGCTGATTGGATCATAATAGTTCGCTACCCTTCTACGAGTGGTTGG
AATCTAGCTAAACACGAACTTACCATGGATAAGGGAAGCGTCGCCACACT
TTCATGAATTCTTACCTCCAATTTTGACTCGTAAAACGTATCGCAAATCT
AGTTGTGTAATACTTTGCGGCCCTGTAGGGGTGGGATGGATGTGAATAAA
CTATCGTGGGATTTCACCTCCTGAGCAGTAAAATAGTTTGAGTTGCAAGT
ATTTTAAAGGTTTTGGAAGTACATTTATTTGTGTTTCTCTATCTGGGATC
GGTGCTTGAAGGTATATCTGGGATCGGGAAATTCAAACTCCAACATGCTC
TTCAACCGGTGTGTTGACGTTGCTGTACAGGGGAGATTTCGGACACTGAC
GCAACGCCGGCTTTTCGTATACAATAGATTATGTCTGCACAACCTGAGAG
TAGTGTATGGTTGGCCCAAGCTGAAATCGAGAAAAAAAAAAAATTAATCC
ATCAGCGGGCAAGACAATTCCATCTGATTCGGCAGGGCTATATACTTTGG
GTAATGGTGGG
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Coding sequence (CDS) from alignment at H-elongata_contig10775:3427..8987+

>mRNA_H-elongata_contig10775.638.1 ID=mRNA_H-elongata_contig10775.638.1|Name=mRNA_H-elongata_contig10775.638.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2148bp|location=Sequence derived from alignment at H-elongata_contig10775:3427..8987+ (Himanthalia elongata Himel1 dioecious)
ATGAACAAAGCGTGCGTCATGAACAAAGCGTGCGTCAGAACGGCGTCTTG
GGGTCACATAGAAGAATACTTGGTGTTGATGCGACTGCCGCTAAACCCCA
CTCATAAGACCTTGGCTCGCTTTGATGCCTTCGAAAGGCTTCGAGAAGAG
TGGGGGGTGGTGGCAAAGTGGGAATTCAAGGTAGGAAGTCCTCCTCATGG
TCTGGTGGAACGGCTCGTGGCATCCTGTCACGCCATCGGTAACGTGGTGA
TGGACACTTGCTGGAGGAGAGGTGCTTGCTTTGTCTGTCACGAAGCGAGC
TTAGACGCTGCAGGTGGCTACTTCGCTCTGGCGCTGCAATTCACCCCGAG
TACCACATCAAACACACCGACAGCGGGAACTTTGGTCGTTCAGGCGTTCG
GAAATAGAGAGGGTCGTGCTCTGTGGGGGGCTCTTCGTTTCGTCATTTCA
GCCGCTTGGGATATATTTCAAGAGTTCCCAGGACTCCGTTGGGAAGCCTG
GGTAGAGTGTCCGGAGCATGGGCAACTGCAGCACTACCTGCCTTGCGTCA
ACGATCGCGAGAGAACGGCGTCTTGGGGTCACATAGAAGAATACTTGGTG
TTGATGCGACTGCCGCTAAACCCCACTCATAAGACCTTGGCTCGCTTTGA
TGCCTTCGAAAGGCTTCGAGAAGAGTGGGGGGTGGTGGCAAAGTGGGAAT
TCAAGGTAGGAAGTCCTCCTCATGGTCTGGTGGAACGGCTCGTGGCATCC
TGTCACGCCATCGGTAACGTGGTGATGGACACTTGCTGGAGGAGAGGTGC
TTGCTTTGTCTGTCACGAAGCGAGCTTAGACGCTGCAGGTGGCTACTTCG
CTCTGGCGCTGCAATTCACCCCGAGTACCACATCAAACACACCGACAGCG
GGAACTTTGGTCGTTCAGGCGTTCGGAAATAGAGAGGGTCGTGCTCTGTG
GGGGGCTCTTCGTTTCGTCATTTCAGCCGCTTGGGATATATTTCAAGAGT
TCCCAGGACTCCGTTGGGAAGCCTGGGTAGAGTGTCCGGAGCATGGGCAA
CTGCAGCACTACCTGCCTTGCGTCAACGATCGCGAGGAAATGTCACCAGC
TCGCCCAATAATACGTCCACGTGAAAGGCCAAATTGTGGTTGCCCGAAAG
GCGTGGCATCACGCTTAGGAACAGTGTTGCAGAGATCACCAGAATGGGGA
AATGTCACCAGCTCGCCCAATAATACGTCCACGTGAAAGGCCAAATTGTG
GTTGCCCGAAAGGCGTGGCATCACGCTTAGGAACAGTGTTGCAGAGATCA
CCAGAATGGGGCCCGTCTCCTCTAGAAGTTGTCTTCAACACTGGAGACGA
AGGCAGGCAGCATGCTCAAAGCTTTGATGATGACGGGGAGAGACGGTTCA
CGGCGGCTCTCGACATTACTCTTAAAGCACCAGCCCGTCTCCTCTAGAAG
TTGTCTTCAACACTGGAGACGAAGGCAGGCAGCATGCTCAAAGCTTTGAT
GATGACGGGGAGAGACGGTTCACGGCGGCTCTCGACATTACTCTTAAAGC
ACCACAAGAAACTCCGATCGTGGACGAAGCAAGCGAAAGCGAGGGGTGGA
GGACGCCTGAGTGGGTGAAAAGTACCTTAGTCGCGGGACCGATGGGAATT
CTTGCCCTTTACGAGACCTGGGTCCCTCTGTTGAAGGTGGCCGATTACTG
GCGCGAGGGTGCGCTTGTAAAGGCTATAACACTTACGTTATTTGCCATGG
TTCTGGCTATCACAGTGGCTGTCGCAGCCGCAGCCTTCTTCAAGAAACTC
CGCCTCAAGTATGGGTTGTGGCCACCTCGAACAAACATGAAGAACGACTA
GCAAGAAACTCCGATCGTGGACGAAGCAAGCGAAAGCGAGGGGTGGAGGA
CGCCTGAGTGGGTGAAAAGTACCTTAGTCGCGGGACCGATGGGAATTCTT
GCCCTTTACGAGACCTGGGTCCCTCTGTTGAAGGTGGCCGATTACTGGCG
CGAGGGTGCGCTTGTAAAGGCTATAACACTTACGTTATTTGCCATGGTTC
TGGCTATCACAGTGGCTGTCGCAGCCGCAGCCTTCTTCAAGAAACTCCGC
CTCAAGTATGGGTTGTGGCCACCTCGAACAAACATGAAGAACGACTAG
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