mRNA_H-elongata_contig107687.633.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig107687.633.1 vs. uniprot
Match: A0A6H5L5G7_9PHAE (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5G7_9PHAE) HSP 1 Score: 160 bits (405), Expect = 1.560e-43 Identity = 92/161 (57.14%), Postives = 102/161 (63.35%), Query Frame = 1
Query: 1 QVIELEPKNERNFYKRFRVFLSKRRYAEAISDLSRALELKPKYKQALAQRAKLLRMMGKCSESNKDYAALEVIDPKHADLETLYPMTKACAERLNAAAVAEKRKDWQAAASAYDAILDEQLDVVGAALLIRRARCHFALRRWLEAVADAGRAVKIAAEGDD 483
QVIELEPKNERNFYKRFRVFLS+R AALEVIDPKHADLE LYP+ CA+RL A AE +K W+AAA AYDAILDEQLD+VGA LL+RRARCHFAL RWL+A ADAGRA K+A+E DD
Sbjct: 107 QVIELEPKNERNFYKRFRVFLSRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALEVIDPKHADLENLYPLAITCAQRLAEGAAAEAQKKWEAAAEAYDAILDEQLDLVGAELLMRRARCHFALGRWLQAAADAGRAAKVASEADD 267
BLAST of mRNA_H-elongata_contig107687.633.1 vs. uniprot
Match: A0A7S1UAC9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAC9_9STRA) HSP 1 Score: 119 bits (297), Expect = 2.020e-28 Identity = 70/161 (43.48%), Postives = 105/161 (65.22%), Query Frame = 1
Query: 1 QVIELEPKNERNFYKRFRVFLSKRRYAEAISDLSRALELKPKYKQALAQRAKLLRMMGKCSESNKDYAALEVIDPKHADLETLYPMTKACAERLNAAAVAEKRKDWQAAASAYDAILDEQLDVVGAALLIRRARCHFALRRWLEAVADAGRAVKIAAEGDD 483
QVI LEP NERN+YKRFRV+ +R+Y EA++DL++ALE+KP+YK LAQRA++LR++GKC S DY L +DP+H DL + P + CA++ AAA A++ +W+A A ++ G + + RA + + EA+AD G+ +KI +GD+
Sbjct: 57 QVIRLEPGNERNYYKRFRVYQRQRKYREALNDLNKALEMKPEYKACLAQRARVLRVVGKCEASLADYEKLGKLDPEHKDLGEV-PRVRQCAQQSRAAASAQRAGNWRAVVDHLSAAMEVTEAADG--MHMERAWAYQQMGELYEAIADYGKVLKI--KGDN 212
BLAST of mRNA_H-elongata_contig107687.633.1 vs. uniprot
Match: A0A833WH03_PHYIN (DnaJ domain n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WH03_PHYIN) HSP 1 Score: 112 bits (280), Expect = 3.560e-26 Identity = 63/155 (40.65%), Postives = 100/155 (64.52%), Query Frame = 1
Query: 1 QVIELEPKNERNFYKRFRVFLSKRRYAEAISDLSRALELKPKYKQALAQRAKLLRMMGKCSESNKDYAALEVIDPKHADLETLYPMTKACAERLNAAAVAEKRKDWQAAASAYDAILDEQLDVVGAALLIRRARCHFALRRWLEAVADAGRAVKI 465
++IELEP+NERNFYKRFR +LS+R+Y+ A+SDLS +L++ PKYKQ QR KLL M+G+C+E+++D+ + + PK A +K CA ++ A A R D+Q+A + +L+ + LL+ RA+ +L+ +A+AD G +K+
Sbjct: 52 KLIELEPRNERNFYKRFRAYLSERKYSHALSDLSSSLDVNPKYKQGRLQRGKLLMMLGQCAEASQDFQTVVELYPKEATGAEQLDKSKECASNIDEAERAHTRGDYQSAYNYLTQVLEGSA-ISSVPLLLERAQLSVSLQNPYDAIADLGSILKL 205
BLAST of mRNA_H-elongata_contig107687.633.1 vs. uniprot
Match: A0A8J5M891_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M891_9STRA) HSP 1 Score: 113 bits (283), Expect = 3.560e-26 Identity = 65/155 (41.94%), Postives = 100/155 (64.52%), Query Frame = 1
Query: 1 QVIELEPKNERNFYKRFRVFLSKRRYAEAISDLSRALELKPKYKQALAQRAKLLRMMGKCSESNKDYAALEVIDPKHADLETLYPMTKACAERLNAAAVAEKRKDWQAAASAYDAILDEQLDVVGAALLIRRARCHFALRRWLEAVADAGRAVKI 465
++IELEPKNERNFYKRFR +LS+R+Y+ A+SDLS +L++ PKYKQ QR KLL M+G+C+E+++D+ AL + PK +K CA ++ A A R D+Q+A + +L+ + LL+ RA+ +L+ +A+AD G +K+
Sbjct: 348 KLIELEPKNERNFYKRFRAYLSERKYSHALSDLSSSLDVNPKYKQGRLQRGKLLMMLGQCAEASQDFQALVELYPKDTAGAEQLDKSKECASYIDEAERAHSRGDYQSAYNYLTQVLEGSA-ISSVPLLLERAQLSVSLQNPYDAIADLGSILKL 501
BLAST of mRNA_H-elongata_contig107687.633.1 vs. uniprot
Match: V9EQH9_PHYPR (J domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=V9EQH9_PHYPR) HSP 1 Score: 112 bits (280), Expect = 4.480e-26 Identity = 63/155 (40.65%), Postives = 100/155 (64.52%), Query Frame = 1
Query: 1 QVIELEPKNERNFYKRFRVFLSKRRYAEAISDLSRALELKPKYKQALAQRAKLLRMMGKCSESNKDYAALEVIDPKHADLETLYPMTKACAERLNAAAVAEKRKDWQAAASAYDAILDEQLDVVGAALLIRRARCHFALRRWLEAVADAGRAVKI 465
++IELEPKNERNFYKRFR +LS+R+Y+ A+SDLS +L++ PKYKQ QR KLL M+G+C+E+++D+ + + PK + +K CA ++ A A R D+Q+A + +L+ + LL+ RA+ +L+ +A+AD G +K+
Sbjct: 52 KLIELEPKNERNFYKRFRAYLSERKYSHALSDLSSSLDVNPKYKQGRLQRGKLLMMLGQCAEASQDFQTVVELYPKDSASAEQLDKSKECASYIDEAERAHSRGDYQSAYNYLSQVLEGSA-ISSVPLLLERAQLSVSLQNPYDAIADLGSILKL 205
BLAST of mRNA_H-elongata_contig107687.633.1 vs. uniprot
Match: A0A2D4BDK8_PYTIN (J domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDK8_PYTIN) HSP 1 Score: 112 bits (279), Expect = 6.890e-26 Identity = 63/155 (40.65%), Postives = 99/155 (63.87%), Query Frame = 1
Query: 1 QVIELEPKNERNFYKRFRVFLSKRRYAEAISDLSRALELKPKYKQALAQRAKLLRMMGKCSESNKDYAALEVIDPKHADLETLYPMTKACAERLNAAAVAEKRKDWQAAASAYDAILDEQLDVVGAALLIRRARCHFALRRWLEAVADAGRAVKI 465
++IELEPKNERN+YKR+R +LS+R+YA A+SDL+ +LE+ PKYKQ L QR KL M+G+C++++KD+ + + P A + CA ++ A A+ R D+Q+A + +L+E + ALL+ RA+ L +A+AD G +K+
Sbjct: 62 KLIELEPKNERNYYKRYRAYLSERKYAHALSDLTGSLEVNPKYKQGLLQRGKLYMMLGQCADASKDFENVLSLFPSEASAHDQLQKSNQCALYIDEAGRAQSRGDYQSAHAYLTQVLEETA-ISSVALLLERAQLSVTLGSPYDAIADLGSVLKL 215
BLAST of mRNA_H-elongata_contig107687.633.1 vs. uniprot
Match: A0A6T5P1C6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5P1C6_HETAK) HSP 1 Score: 112 bits (279), Expect = 7.450e-26 Identity = 66/158 (41.77%), Postives = 95/158 (60.13%), Query Frame = 1
Query: 1 QVIELEPKNERNFYKRFRVFLSKRRYAEAISDLSRALELKPKYKQALAQRAKLLRMMGKCSESNKDYAALEVIDPKHADLETLYPMTKACAERLNAAAVAEKRKDWQAAASAYDAILDEQLDVVGAALLIRRARCHFALRRWLEAVADAGRAVKIAAE 474
+VI++EPKNERN+YKRFRV+LS+R+Y EA+SDL+ ALE+KP YK ALAQRAKL R+ DP +L Y + CA+ + A A +R+DW+ A A LD L V L +R+A+ + + E +A++G+A+K+ E
Sbjct: 83 KVIQIEPKNERNYYKRFRVYLSQRKYREAVSDLTAALEIKPSYKVALAQRAKLHRLXXXXXXXXXXXXXXXXXDPNSKELGDGYEAAQLCAKAIKTAEEAARRRDWRVAKDQLQAALD--LTEVAHDLHVRKAQVCYEMNDHFEVIAESGKAIKLEPE 238
BLAST of mRNA_H-elongata_contig107687.633.1 vs. uniprot
Match: A0A0W8DFU2_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DFU2_PHYNI) HSP 1 Score: 112 bits (280), Expect = 9.240e-26 Identity = 63/155 (40.65%), Postives = 100/155 (64.52%), Query Frame = 1
Query: 1 QVIELEPKNERNFYKRFRVFLSKRRYAEAISDLSRALELKPKYKQALAQRAKLLRMMGKCSESNKDYAALEVIDPKHADLETLYPMTKACAERLNAAAVAEKRKDWQAAASAYDAILDEQLDVVGAALLIRRARCHFALRRWLEAVADAGRAVKI 465
++IELEPKNERNFYKRFR +LS+R+Y+ A+SDLS +L++ PKYKQ QR KLL M+G+C+E+++D+ + + PK + +K CA ++ A A R D+Q+A + +L+ + LL+ RA+ +L+ +A+AD G +K+
Sbjct: 499 KLIELEPKNERNFYKRFRAYLSERKYSHALSDLSSSLDVNPKYKQGRLQRGKLLMMLGQCAEASQDFQTVVELYPKDSASAEQLDKSKECASYIDEAERAHSRGDYQSAYNYLSQVLEGSA-ISSVPLLLERAQLSVSLQNPYDAIADLGSILKL 652
BLAST of mRNA_H-elongata_contig107687.633.1 vs. uniprot
Match: G5A6K4_PHYSP (J domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=G5A6K4_PHYSP) HSP 1 Score: 110 bits (274), Expect = 3.140e-25 Identity = 62/155 (40.00%), Postives = 100/155 (64.52%), Query Frame = 1
Query: 1 QVIELEPKNERNFYKRFRVFLSKRRYAEAISDLSRALELKPKYKQALAQRAKLLRMMGKCSESNKDYAALEVIDPKHADLETLYPMTKACAERLNAAAVAEKRKDWQAAASAYDAILDEQLDVVGAALLIRRARCHFALRRWLEAVADAGRAVKI 465
++IELEPKNERNFYKRFR +LS+R+Y+ A++DLS +L++ PKYKQ + QR KLL M+G+C+E+++D+ L + PK ++ CA ++ A A R D+Q+A + +L+ + LL+ RA+ +L+ +A+AD G +K+
Sbjct: 52 KLIELEPKNERNFYKRFRAYLSERKYSHALTDLSSSLDVNPKYKQGMLQRGKLLMMLGQCAEASQDFQNLVELYPKDTAGAEQLDKSRECAAYIDEAERAHSRGDYQSAYTYLTQVLEGSA-ISSVPLLLERAQLSVSLQNPYDAIADLGTILKL 205
BLAST of mRNA_H-elongata_contig107687.633.1 vs. uniprot
Match: A0A3R7MLN1_9STRA (J domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7MLN1_9STRA) HSP 1 Score: 107 bits (267), Expect = 3.020e-24 Identity = 61/155 (39.35%), Postives = 98/155 (63.23%), Query Frame = 1
Query: 1 QVIELEPKNERNFYKRFRVFLSKRRYAEAISDLSRALELKPKYKQALAQRAKLLRMMGKCSESNKDYAALEVIDPKHADLETLYPMTKACAERLNAAAVAEKRKDWQAAASAYDAILDEQLDVVGAALLIRRARCHFALRRWLEAVADAGRAVKI 465
++IELEPKNERNFYKRFR +LS+R+Y+ A+SDLS +L++ P+YKQ + QR KLL M+G+C+E++ D+ + P A ++ CA ++ A A R D+Q+A + +L+ + LL+ RA+ +L+ +A+AD G +K+
Sbjct: 52 KLIELEPKNERNFYKRFRAYLSERKYSHALSDLSLSLDVNPRYKQGILQRGKLLMMLGQCAEASADFQSFVEFYPTDAAGAEQLEKSRQCANYIDEAEHAHSRGDYQSAYTYLTQVLEGSA-ISSVPLLLERAQLSVSLQNPYDAIADLGSILKL 205 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig107687.633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig107687.633.1 >prot_H-elongata_contig107687.633.1 ID=prot_H-elongata_contig107687.633.1|Name=mRNA_H-elongata_contig107687.633.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=161bp QVIELEPKNERNFYKRFRVFLSKRRYAEAISDLSRALELKPKYKQALAQRback to top mRNA from alignment at H-elongata_contig107687:358..1702- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig107687.633.1 ID=mRNA_H-elongata_contig107687.633.1|Name=mRNA_H-elongata_contig107687.633.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1345bp|location=Sequence derived from alignment at H-elongata_contig107687:358..1702- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig107687:358..1702- >mRNA_H-elongata_contig107687.633.1 ID=mRNA_H-elongata_contig107687.633.1|Name=mRNA_H-elongata_contig107687.633.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=966bp|location=Sequence derived from alignment at H-elongata_contig107687:358..1702- (Himanthalia elongata Himel1 dioecious)back to top |