prot_H-elongata_contig107675.630.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig107675.630.1
Unique Nameprot_H-elongata_contig107675.630.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length188
Homology
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BLAST of mRNA_H-elongata_contig107675.630.1 vs. uniprot
Match: A0A6H5JGS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGS5_9PHAE)

HSP 1 Score: 261 bits (666), Expect = 1.450e-80
Identity = 143/187 (76.47%), Postives = 160/187 (85.56%), Query Frame = 0 
Query:    1 MTRLLVEGGASLDAVDVNGNGVVHAAVCDSPAVLAILIDNGADVTVANSHDLTPKGLCEQYCPPRLRGRMLQLLKEAMLARAKETARKERLTESQLNIEAVYHQLAMLRSKLAATAAARTEVPPSEAAAGAQTENSLLTLVEANVRVVEYQRDALQDLETTTTRVERMMRRLHMRLDTMSLKDTSHS 187
            MTRLLVEGGA+L+AVDVNGNGVVHAAVCDSPAVLAILID+GADVTVAN   LTP+ LCEQYCPPRL+ RMLQLLKE  LA+AK TARK ++ E Q+NIEAVYHQLAMLRSKLAATAAA T++P SEAA GAQ EN+LLTLVEANVRVVE QR AL+++E T  R+ERM RRLHMRLD +   D S S
Sbjct:  472 MTRLLVEGGANLEAVDVNGNGVVHAAVCDSPAVLAILIDHGADVTVANFDGLTPQRLCEQYCPPRLKERMLQLLKEGALAQAKATARKNQVAEEQVNIEAVYHQLAMLRSKLAATAAANTDIPASEAAEGAQMENALLTLVEANVRVVEGQRHALENMEKTVDRMERMFRRLHMRLDLVHPGDVSFS 658
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BLAST of mRNA_H-elongata_contig107675.630.1 vs. uniprot
Match: D7FI34_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI34_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 2.410e-77
Identity = 136/187 (72.73%), Postives = 150/187 (80.21%), Query Frame = 0 
Query:    1 MTRLLVEGGASLDAVDVNGNGVVHAAVCDSPAVLAILIDNGADVTVANSHDLTPKGLCEQYCPPRLRGRMLQLLKEAMLARAKETARKERLTESQLNIEAVYHQLAMLRSKLAATAAARTEVPPSEAAAGAQTENSLLTLVEANVRVVEYQRDALQDLETTTTRVERMMRRLHMRLDTMSLKDTSHS 187
            MTRLLVEGGA+L+AVDVNGNGVVHAAVCDSPAVLAILID+GADVTV+N   LTP+ LCEQYCPPRL+ RMLQLLKEA LA+AK TARK ++ E Q+NIEAVYHQLAMLRSKLAATAAA T++P SEAA GAQ EN+LLTLVEANVRVVE QR               M RRLHMRLD +   D S S
Sbjct:   99 MTRLLVEGGANLEAVDVNGNGVVHAAVCDSPAVLAILIDHGADVTVSNFDGLTPQRLCEQYCPPRLKERMLQLLKEAALAQAKATARKNQVAEEQVNIEAVYHQLAMLRSKLAATAAANTDIPASEAAEGAQMENALLTLVEANVRVVEGQRHXXXXXXXXXXXXXXMFRRLHMRLDLVHPGDVSFS 285
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig107675.630.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JGS5_9PHAE1.450e-8076.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI34_ECTSI2.410e-7772.73Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..97
e-value: 5.0E-9
score: 38.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..59
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..54
score: 11.426

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig107675contigH-elongata_contig107675:96..1717 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig107675.630.1mRNA_H-elongata_contig107675.630.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig107675 81..1717 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig107675.630.1 ID=prot_H-elongata_contig107675.630.1|Name=mRNA_H-elongata_contig107675.630.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=188bp
MTRLLVEGGASLDAVDVNGNGVVHAAVCDSPAVLAILIDNGADVTVANSH
DLTPKGLCEQYCPPRLRGRMLQLLKEAMLARAKETARKERLTESQLNIEA
VYHQLAMLRSKLAATAAARTEVPPSEAAAGAQTENSLLTLVEANVRVVEY
QRDALQDLETTTTRVERMMRRLHMRLDTMSLKDTSHS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom