prot_H-elongata_contig10767.629.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10767.629.1
Unique Nameprot_H-elongata_contig10767.629.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length759
Homology
BLAST of mRNA_H-elongata_contig10767.629.1 vs. uniprot
Match: A0A6H5KRV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRV1_9PHAE)

HSP 1 Score: 251 bits (642), Expect = 1.050e-66
Identity = 319/824 (38.71%), Postives = 373/824 (45.27%), Query Frame = 0
Query:   38 RASDRFAFINAVMAHARDGGDLLEIEEACRSD---GFTQEGYEGTPK----VTSPRQERGKMAH--EWSPSTAMSSGGSGVSLGGQTSHSRGGHDAQSMYSQALRQAHPKSPSPPRPR-----GEVLVAPPKTPPRETGKENLPCTKPTADKYTDPSSTTGGVPERNTGGCVDLTGDYRITKS----------------------------------------------------HPDEVEPGVTFGCAGGREVVVRG-FGSTALSSVAPLGQRTANGGPSATNAAQVKGEVVAPSAPSCGSGFSREKKIGANIADSACGGRGNSGPDRIGVGSKSNGSTSLTDRQRQIMLENREKALARLKQRQQEAAAAQAGVGRPVGAIATVPTAASSRYIPKTARAGPGAGGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENGEKNASNXXXXXXXXXXXXXXXAHVAA-------------VSCTIRDRGVTAKSTMTTIGNVGQRA----------------------AAPQRLGSPSAALASASAKSTIGATSTTILLTTLALSAPRAHALESLAAELRSREGFAVHASPLGGGS------RDVDLAVGSQCAVCVRSVRQFLAQTQVSSAAAPPSPSSYVSPRSSGGGNHALAAGDSVKPALLVLLETALQRYARVVVIVEGLNGEQLQLR-----------REATGKVETLRGASVVPSDGWRVTADKVVALVEQEAVAGVGLPVEVTGPSLNTAQEKFLAFLLRAPTLSYPGGLYLLQAFRGRSGKEMIASSAKEFQSAVPGMTARQAAMLKRFLAS 742
            RAS RFAF+NAVMAHAR+GGD L+IEEAC SD   GFTQEGY GTP+     T+P   RG  A   +WSP   MSSGGS  S G  T+  RG   A+ MYSQAL QAHP SP+ PR       G  L AP      + GKEN+      A                                                                                     H D   P V       R   V G + STA S++    Q +++G       A+V G+         G+G + E                                TSLT+ QRQ MLENR KALARLK +Q                                           XXXXXXXXXXXXXXXXXXXXX            ++G      XXXXXXXXXXXXXXX                  +S + RD+  TA  + +  G    RA                      AAP +L SP  A  +                  +  SAPRA  LE LA ELR R G  +HA+PLGGG       RDVDLAVG+QCAVCVR+ +Q L+QT  S    P SPS     R  G          +    L+ LL  ALQRYARVVV+VEGL GE +              REA GKVE LRGASVV   GWR  ADKV  LV +E   G+GLP  VTGPSL  AQ KFL+ LLRAPTLSYPGGL +L+AFRGRSGKE++ASSA+E Q++VPGMTA+QAA LKRFL S
Sbjct: 1688 RASSRFAFVNAVMAHAREGGDPLDIEEACGSDAASGFTQEGYAGTPESTATTTTPGSRRGGGAGCPDWSPCDGMSSGGS-ASDGRLTASERG---AEPMYSQALLQAHPGSPASPRAGAEGTGGRALTAPV----HQWGKENVAPAGSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRDASRPVVQ----NARRAAVAGRWTSTANSAIENSKQASSSG-------AEVPGKKG-------GAGPTAEXXX----------------XXXXXXXXXXXXXTSLTELQRQKMLENRAKALARLKAKQXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQRNRFKITMDMDSGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPRLSPSSRDKERTAVGSASVCGTTAPRASQXXXXXXXXXXXXXXXXXXXXAAPAKLSSPRPAPVAV-----------------VPFSAPRAATLEPLARELRPRAGIVLHATPLGGGGGDAGPGRDVDLAVGAQCAVCVRTRKQLLSQTHSS----PTSPS-----RREG----------AAPXXLVALLRAALQRYARVVVVVEGL-GEDVGXXXXXXXXXXXXPREAVGKVEALRGASVVACRGWRDAADKVEGLVRREESDGLGLPKVVTGPSLTPAQTKFLSALLRAPTLSYPGGLLMLEAFRGRSGKEVVASSARELQASVPGMTAQQAAKLKRFLMS 2426          
BLAST of mRNA_H-elongata_contig10767.629.1 vs. uniprot
Match: D7FP48_ECTSI (DEAD box helicase similar to CG7922-PA n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP48_ECTSI)

HSP 1 Score: 171 bits (433), Expect = 3.650e-40
Identity = 99/153 (64.71%), Postives = 110/153 (71.90%), Query Frame = 0
Query:  603 ALQRYARVVVIVEGLNGEQL-------------QLRREATGKVETLRGASVVPSDGWRVTADKVVALVEQEAVAGVGLPVEVTGPSLNTAQEKFLAFLLRAPTLSYPGGLYLLQAFRGRSGKEMIASSAKEFQSAVPGMTARQAAMLKRFLAS 742
            ALQRYARVVV VEGL GE +                REA GKVE LRGASVV   GWR  ADKV  LV +E   G GLP  VTGPSL  AQ KFL+ LLRAPTLSYPGGL +L+AFRGRSGKE++ASSA+E Q++VPGMTA+QAA LKRFL S
Sbjct: 2496 ALQRYARVVVAVEGL-GEDVGGSXXXXXXXXXXXXPREAVGKVEALRGASVVACQGWRDAADKVEGLVRREENDGFGLPKVVTGPSLTPAQTKFLSALLRAPTLSYPGGLLMLEAFRGRSGKEVVASSARELQASVPGMTAQQAAKLKRFLMS 2647          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10767.629.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRV1_9PHAE1.050e-6638.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FP48_ECTSI3.650e-4064.71DEAD box helicase similar to CG7922-PA n=1 Tax=Ect... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 321..341

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10767contigH-elongata_contig10767:2433..5928 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10767.629.1mRNA_H-elongata_contig10767.629.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10767 1400..7792 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10767.629.1 ID=prot_H-elongata_contig10767.629.1|Name=mRNA_H-elongata_contig10767.629.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=759bp
MYLQLLAESPSPNPFLRGGDVGSSDRRAGGRHPRGRGRASDRFAFINAVM
AHARDGGDLLEIEEACRSDGFTQEGYEGTPKVTSPRQERGKMAHEWSPST
AMSSGGSGVSLGGQTSHSRGGHDAQSMYSQALRQAHPKSPSPPRPRGEVL
VAPPKTPPRETGKENLPCTKPTADKYTDPSSTTGGVPERNTGGCVDLTGD
YRITKSHPDEVEPGVTFGCAGGREVVVRGFGSTALSSVAPLGQRTANGGP
SATNAAQVKGEVVAPSAPSCGSGFSREKKIGANIADSACGGRGNSGPDRI
GVGSKSNGSTSLTDRQRQIMLENREKALARLKQRQQEAAAAQAGVGRPVG
AIATVPTAASSRYIPKTARAGPGAGGPPEPGPEARQSSTSLAQRGRFRMT
MDMESDDDSDAENGEKNASNPPPPPIVALSASSSSAHVAAVSCTIRDRGV
TAKSTMTTIGNVGQRAAAPQRLGSPSAALASASAKSTIGATSTTILLTTL
ALSAPRAHALESLAAELRSREGFAVHASPLGGGSRDVDLAVGSQCAVCVR
SVRQFLAQTQVSSAAAPPSPSSYVSPRSSGGGNHALAAGDSVKPALLVLL
ETALQRYARVVVIVEGLNGEQLQLRREATGKVETLRGASVVPSDGWRVTA
DKVVALVEQEAVAGVGLPVEVTGPSLNTAQEKFLAFLLRAPTLSYPGGLY
LLQAFRGRSGKEMIASSAKEFQSAVPGMTARQAAMLKRFLASGGGAAQPI
VSRAAGRT*
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