mRNA_H-elongata_contig10767.629.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig10767.629.1
Unique NamemRNA_H-elongata_contig10767.629.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig10767.629.1 vs. uniprot
Match: A0A6H5KRV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRV1_9PHAE)

HSP 1 Score: 301 bits (771), Expect = 5.360e-80
Identity = 388/988 (39.27%), Postives = 447/988 (45.24%), Query Frame = 1 
Query:   88 RKCDFDKAVYRRFIDHEAEVDEDLSDDDEDEILGEYDSEDSFVNDGPLSYETTSPSSQGGDTPSRSQETLVEGGXXXXXXXXXXXXXXXGGWGSKFDGVVDEKGMYLQLLAESPSPNPFLRGGDVGSSDRRA----------GGRH-------------PRGRGRASDRFAFINAVMAHARDGGDLLEIEEACRSD---GFTQEGYEGTPK----VTSPRQERGKMAH--EWSPSTAMSSGGSGVSLGGQTSHSRGGHDAQSMYSQALRQAHPKSPSPPRPR-----GEVLVAPPKTPPRETGKENLPCTKPTADKYTDPSSTTGGVPERNTGGCVDLTGDYRITKS----------------------------------------------------HPDEVEPGVTFGCAGGREVVVRG-FGSTALSSVAPLGQRTANGGPSATNAAQVKGEVVAPSAPSCGSGFSREKKIGANIADSACGGRGNSGPDRIGVGSKSNGSTSLTDRQRQIMLENREKALARLKQRQQEAAAAQAGVGRPVGAIATVPTAASSRYIPKTARAGPGAGGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENGEKNASNXXXXXXXXXXXXXXXAHVAA-------------VSCTIRDRGVTAKSTMTTIGNVGQRA----------------------AAPQRLGSPSAALASASAKSTIGATSTTILLTTLALSAPRAHALESLAAELRSREGFAVHASPLGGGS------RDVDLAVGSQCAVCVRSVRQFLAQTQVSSAAAPPSPSSYVSPRSSGGGNHALAAGDSVKPALLVLLETALQRYARVVVIVEGLNGEQLQLR-----------REATGKVETLRGASVVPSDGWRVTADKVVALVEQEAVAGVGLPVEVTGPSLNTAQEKFLAFLLRAPTLSYPGGLYLLQAFRGRSGKEMIASSAKEFQSAVPGMTARQAAMLKRFLAS 2625
            R CDFDKA YRR+ID EAEVDED+SDDDE E+  +YDSEDSFVNDGPLSY T S                    XXXXXXXXXXXXX  G  G KFD   DE  MY QLL +                               G H                  RAS RFAF+NAVMAHAR+GGD L+IEEAC SD   GFTQEGY GTP+     T+P   RG  A   +WSP   MSSGGS  S G  T+  RG   A+ MYSQAL QAHP SP+ PR       G  L AP      + GKEN+      A                                                                                     H D   P V       R   V G + STA S++    Q +++G       A+V G+         G+G + E                                TSLT+ QRQ MLENR KALARLK +Q                                           XXXXXXXXXXXXXXXXXXXXX            ++G      XXXXXXXXXXXXXXX                  +S + RD+  TA  + +  G    RA                      AAP +L SP  A  +                  +  SAPRA  LE LA ELR R G  +HA+PLGGG       RDVDLAVG+QCAVCVR+ +Q L+QT  S    P SPS     R  G          +    L+ LL  ALQRYARVVV+VEGL GE +              REA GKVE LRGASVV   GWR  ADKV  LV +E   G+GLP  VTGPSL  AQ KFL+ LLRAPTLSYPGGL +L+AFRGRSGKE++ASSA+E Q++VPGMTA+QAA LKRFL S
Sbjct: 1527 RGCDFDKASYRRYIDTEAEVDEDVSDDDEAELENDYDSEDSFVNDGPLSYVTDSSQXX---XXXXXXXXXXXXXXXXXXXXXXXXXXQRGRKGPKFDTNEDETAMYRQLLQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRSGWHVTXXXXXXXXXXXXXXXXRASSRFAFVNAVMAHAREGGDPLDIEEACGSDAASGFTQEGYAGTPESTATTTTPGSRRGGGAGCPDWSPCDGMSSGGS-ASDGRLTASERG---AEPMYSQALLQAHPGSPASPRAGAEGTGGRALTAPV----HQWGKENVAPAGSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRDASRPVVQ----NARRAAVAGRWTSTANSAIENSKQASSSG-------AEVPGKKG-------GAGPTAEXXX----------------XXXXXXXXXXXXXTSLTELQRQKMLENRAKALARLKAKQXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQRNRFKITMDMDSGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPRLSPSSRDKERTAVGSASVCGTTAPRASQXXXXXXXXXXXXXXXXXXXXAAPAKLSSPRPAPVAV-----------------VPFSAPRAATLEPLARELRPRAGIVLHATPLGGGGGDAGPGRDVDLAVGAQCAVCVRTRKQLLSQTHSS----PTSPS-----RREG----------AAPXXLVALLRAALQRYARVVVVVEGL-GEDVGXXXXXXXXXXXXPREAVGKVEALRGASVVACRGWRDAADKVEGLVRREESDGLGLPKVVTGPSLTPAQTKFLSALLRAPTLSYPGGLLMLEAFRGRSGKEVVASSARELQASVPGMTAQQAAKLKRFLMS 2426
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BLAST of mRNA_H-elongata_contig10767.629.1 vs. uniprot
Match: D7FP48_ECTSI (DEAD box helicase similar to CG7922-PA n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP48_ECTSI)

HSP 1 Score: 171 bits (433), Expect = 4.090e-39
Identity = 99/153 (64.71%), Postives = 110/153 (71.90%), Query Frame = 1 
Query: 2206 ALQRYARVVVIVEGLNGEQL-------------QLRREATGKVETLRGASVVPSDGWRVTADKVVALVEQEAVAGVGLPVEVTGPSLNTAQEKFLAFLLRAPTLSYPGGLYLLQAFRGRSGKEMIASSAKEFQSAVPGMTARQAAMLKRFLAS 2625
            ALQRYARVVV VEGL GE +                REA GKVE LRGASVV   GWR  ADKV  LV +E   G GLP  VTGPSL  AQ KFL+ LLRAPTLSYPGGL +L+AFRGRSGKE++ASSA+E Q++VPGMTA+QAA LKRFL S
Sbjct: 2496 ALQRYARVVVAVEGL-GEDVGGSXXXXXXXXXXXXPREAVGKVEALRGASVVACQGWRDAADKVEGLVRREENDGFGLPKVVTGPSLTPAQTKFLSALLRAPTLSYPGGLLMLEAFRGRSGKEVVASSARELQASVPGMTAQQAAKLKRFLMS 2647
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10767.629.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRV1_9PHAE5.360e-8039.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FP48_ECTSI4.090e-3964.71DEAD box helicase similar to CG7922-PA n=1 Tax=Ect... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10767contigH-elongata_contig10767:1400..7792 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score171.0
Seed ortholog evalue2.1e-39
Seed eggNOG ortholog2880.D7FP48
Preferred nameFANCM
KEGG koko:K10896
KEGG Pathwayko03460,map03460
KEGG ModuleM00413
GOsGO:0000003,GO:0000018,GO:0000019,GO:0000280,GO:0000712,GO:0000724,GO:0000725,GO:0003674,GO:0003678,GO:0003682,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007127,GO:0007131,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009892,GO:0009987,GO:0010605,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0022402,GO:0022414,GO:0031297,GO:0031323,GO:0031324,GO:0031974,GO:0031981,GO:0032392,GO:0032508,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0035825,GO:0036297,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043240,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045003,GO:0045005,GO:0045132,GO:0045910,GO:0045934,GO:0045950,GO:0046483,GO:0048285,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051276,GO:0051304,GO:0051307,GO:0051321,GO:0051716,GO:0060255,GO:0061982,GO:0065007,GO:0070013,GO:0070035,GO:0071103,GO:0071704,GO:0071821,GO:0071840,GO:0080090,GO:0090304,GO:0098813,GO:0140013,GO:0140097,GO:1901360,GO:1901576,GO:1903046
EggNOG free text desc.helicase activity
EggNOG OGsCOG1111@1,COG5141@1,KOG0354@2759,KOG0955@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03400
Hectar predicted targeting categoryother localisation
Exons7
Model size3709
Cds size2277
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929606.1615467-UTR-H-elongata_contig10767:1399..24321622929606.1615467-UTR-H-elongata_contig10767:1399..2432Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10767 1400..2432 -
1691679088.8671055-UTR-H-elongata_contig10767:1399..24321691679088.8671055-UTR-H-elongata_contig10767:1399..2432Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10767 1400..2432 -
1622929606.2616982-UTR-H-elongata_contig10767:5928..59311622929606.2616982-UTR-H-elongata_contig10767:5928..5931Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10767 5929..5931 -
1691679088.9191015-UTR-H-elongata_contig10767:5928..59311691679088.9191015-UTR-H-elongata_contig10767:5928..5931Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10767 5929..5931 -
1622929606.2796285-UTR-H-elongata_contig10767:6243..64391622929606.2796285-UTR-H-elongata_contig10767:6243..6439Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10767 6244..6439 -
1691679088.9315574-UTR-H-elongata_contig10767:6243..64391691679088.9315574-UTR-H-elongata_contig10767:6243..6439Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10767 6244..6439 -
1622929606.296348-UTR-H-elongata_contig10767:7102..71801622929606.296348-UTR-H-elongata_contig10767:7102..7180Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10767 7103..7180 -
1691679088.9422674-UTR-H-elongata_contig10767:7102..71801691679088.9422674-UTR-H-elongata_contig10767:7102..7180Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10767 7103..7180 -
1622929606.3219724-UTR-H-elongata_contig10767:7670..77921622929606.3219724-UTR-H-elongata_contig10767:7670..7792Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10767 7671..7792 -
1691679088.949291-UTR-H-elongata_contig10767:7670..77921691679088.949291-UTR-H-elongata_contig10767:7670..7792Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10767 7671..7792 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929606.1901429-CDS-H-elongata_contig10767:2432..25621622929606.1901429-CDS-H-elongata_contig10767:2432..2562Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10767 2433..2562 -
1691679088.8801293-CDS-H-elongata_contig10767:2432..25621691679088.8801293-CDS-H-elongata_contig10767:2432..2562Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10767 2433..2562 -
1622929606.2049117-CDS-H-elongata_contig10767:3243..33801622929606.2049117-CDS-H-elongata_contig10767:3243..3380Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10767 3244..3380 -
1691679088.8918188-CDS-H-elongata_contig10767:3243..33801691679088.8918188-CDS-H-elongata_contig10767:3243..3380Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10767 3244..3380 -
1622929606.223478-CDS-H-elongata_contig10767:3624..52961622929606.223478-CDS-H-elongata_contig10767:3624..5296Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10767 3625..5296 -
1691679088.8990252-CDS-H-elongata_contig10767:3624..52961691679088.8990252-CDS-H-elongata_contig10767:3624..5296Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10767 3625..5296 -
1622929606.239343-CDS-H-elongata_contig10767:5590..59281622929606.239343-CDS-H-elongata_contig10767:5590..5928Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10767 5591..5928 -
1691679088.9072003-CDS-H-elongata_contig10767:5590..59281691679088.9072003-CDS-H-elongata_contig10767:5590..5928Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10767 5591..5928 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10767.629.1prot_H-elongata_contig10767.629.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig10767 2433..5928 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig10767.629.1

>prot_H-elongata_contig10767.629.1 ID=prot_H-elongata_contig10767.629.1|Name=mRNA_H-elongata_contig10767.629.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=759bp
MYLQLLAESPSPNPFLRGGDVGSSDRRAGGRHPRGRGRASDRFAFINAVM
AHARDGGDLLEIEEACRSDGFTQEGYEGTPKVTSPRQERGKMAHEWSPST
AMSSGGSGVSLGGQTSHSRGGHDAQSMYSQALRQAHPKSPSPPRPRGEVL
VAPPKTPPRETGKENLPCTKPTADKYTDPSSTTGGVPERNTGGCVDLTGD
YRITKSHPDEVEPGVTFGCAGGREVVVRGFGSTALSSVAPLGQRTANGGP
SATNAAQVKGEVVAPSAPSCGSGFSREKKIGANIADSACGGRGNSGPDRI
GVGSKSNGSTSLTDRQRQIMLENREKALARLKQRQQEAAAAQAGVGRPVG
AIATVPTAASSRYIPKTARAGPGAGGPPEPGPEARQSSTSLAQRGRFRMT
MDMESDDDSDAENGEKNASNPPPPPIVALSASSSSAHVAAVSCTIRDRGV
TAKSTMTTIGNVGQRAAAPQRLGSPSAALASASAKSTIGATSTTILLTTL
ALSAPRAHALESLAAELRSREGFAVHASPLGGGSRDVDLAVGSQCAVCVR
SVRQFLAQTQVSSAAAPPSPSSYVSPRSSGGGNHALAAGDSVKPALLVLL
ETALQRYARVVVIVEGLNGEQLQLRREATGKVETLRGASVVPSDGWRVTA
DKVVALVEQEAVAGVGLPVEVTGPSLNTAQEKFLAFLLRAPTLSYPGGLY
LLQAFRGRSGKEMIASSAKEFQSAVPGMTARQAAMLKRFLASGGGAAQPI
VSRAAGRT*
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mRNA from alignment at H-elongata_contig10767:1400..7792-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig10767.629.1 ID=mRNA_H-elongata_contig10767.629.1|Name=mRNA_H-elongata_contig10767.629.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6393bp|location=Sequence derived from alignment at H-elongata_contig10767:1400..7792- (Himanthalia elongata Himel1 dioecious)
CAACGGATTTCGACGTCAGCGCGCAACAAGCGCCTGCGGAAGAACGGAAG
CGGAGATGGCGGCAAGAAGATTGGGAACGGAAATGGAAGGAAGTGCGACT
TCGACAAGGCTGTTTACCGAAGGTGAGTTCTGCGCTGAAGGCGGTGATGC
TTGCTGCAGAACGAAAAAGAGACGGGCGTTCGTGCGAAGGGTATGTCTGG
TGGGGCGGATGATAAAGGCGCACGAGCAGATCGTGTGAAGGGAGGCGAGG
GGGAGGGTGGATATATATTGCCGTATTTTGTACTGGAGCGTAGCGTAGGT
GGCAGTGTGTCCTAATGGAAAACGGCGCTAGTCTAGGCTATGCATTCTTT
GGTGTAGAATGCCGTGCGGCGGGTTCACAGCTCTGGTCCTTTGAGCGTAG
TCTTTCTCAAACAAAAAAACAAGATGCGTCCCCAAGATGTGCTATTTTGG
CTATATAATAGAAATCACCGTATTTTGGCTATTTTGCCTGTACGGTGTTT
TGTTTTGTTTTTGTTTGTTTTTTGTTTTGTGTGCGGTAGTTAGTTAGTTT
GCACTGAACAAAATCGCGCGCGGGGTCAAAAACACCGCCGCCGCCGGGGC
CGGTTGGAGCAGGTTTATCGACCACGAGGCAGAGGTTGACGAAGATCTTT
CGGACGACGACGAGGACGAAATTCTCGGCGAGTACGACAGGTGGGTTTTG
AGCACCACAAGAAGAATTTTAAAAAAACACACCAGATATTACAAAAAAAA
ACGCAAACAAGAAGTGTGCACCTTTTGTTCCAAACCTCGTACTATATAAC
ATTTTCGGTGGATCACGGAAGAAGGCAGGCGAGAAAGAGAAACCGTTGAT
GCTTTTCTGCTTCAATCAATAAAGGTTGAAAATAAATACGATACGAGTAT
AGTAATAGCAATAGTAATAGTAACGATGACAGTTAACCCCTATGGAACTC
GATTCGTTTTTTACATACTAAATTCAATATAAAACTTGAAATCCAGTTCC
TGGTGGGAGGAGAGGCGTCAATATATATATATACCTTACCTTTTTCTACG
GGTTGTTCCATTGCCTAAATTTTGGATTGCCCTCTTGTTCCGTAACTTTC
GGGTCCAATACAAACAAAAAAATGACGCCGCATGCTGCGCCGGGTTTTTT
TATGCGGATAGTCCTTGTACGAGATATAGAAAGAGAAGGTCGTGTTTAGT
TTTGGTTAGCTTTCAACGGGATGAGGGGTGCGGATTGGCGGGTTGTTGCT
TACAACCGATTGGTGCGGGACTTGCGTTCACTCGATTTATGTTTTCCCCT
CGTTCCTCTGGGATTTGTGTTGCCGTGTAAAACGCCTCCACCGAGAAACG
CAGCGAGGATAGCTTCGTCAATGACGGGCCGCTCTCGTACGAGACGACGT
CCCCTTCTTCGCAGGGAGGAGACACGCCGTCGCGCTCTCAAGAAACCCTT
GTGGAAGGCGGTGCCGGTGACGACGACGGTGCGCGGAGAAGGGCGAAGAG
ACGGCGCGGCGGTTGGGGTTCAAAGTTTGACGGCGTCGTGGATGAAAAGG
TGAGTCTTGCGCAGGGATTTTACGAAGATAAAAAAATGATGTCCCTTCCG
TGTTACGAGAGAGAGACAAGATATACCCATGAGTTTTTTTCCGTATCGGT
GCTCCATCGCCGCCGTCGCCGCAGCCGGCTCTGACGCTGAGGCTGAGCTC
TTATGTGATGCGTTATGCACTTCGTACCATGGGTGATTTTTTCTAACAAG
CCTCCCCCTGTCTCCGCGAACCGACGTTTCCTATTATCCGTCGCACCATC
TTCGCCCCTCTTTCCCTTTTGCCGACGGTTCGTAATTTTCAATGGCGTCA
TTTTCCGCAAGGGTATGTACCTGCAACTCCTGGCGGAGTCGCCGTCGCCG
AATCCTTTTCTCCGCGGTGGCGACGTTGGCTCCTCTGATCGGCGCGCGGG
AGGGCGCCACCCTCGGGGTCGTGGCAGAGCGTCGGACCGCTTTGCGTTCA
TCAACGCGGTCATGGCTCACGCACGGGACGGAGGAGACCTTTTAGAGATC
GAGGAGGCGTGCAGGTCCGATGGTTTCACCCAGGAAGGGTACGAGGGAAC
TCCGAAGGTGACGTCACCAAGGCAGGAAAGAGGGAAGATGGCCCACGAGT
GGTCACCGTCCACCGCGATGTCCTCCGGAGGCTCGGGAGTGTCTCTTGGA
GGGTAAGTCTAAGAGGCGAGGCAAGTGCGTAAAAACACATGCGGTTGGAT
GTTTGTGATCTCTCGCGTCTCGTGTCTCCTTCACGCGTTTCCCAGAGCTG
AACAAGTCCCACCTCGTCCCATATCGTCCCACGCGATTTTGGGGCCTTTT
GTAGCGTTGAGTTTTGATCGCATGAGCTCATGTTTTTATATCACGTCCCC
AGCGTCGTGCGCCTCCGTCCCATGCGATGCTTCCGTCGCGACGACTCCCG
CGCTCTTCCCGAACTTTCGCTCTCGCTGTGCTTCGTCTGGGCGCAGGCAA
ACCTCCCACTCCCGCGGTGGCCACGACGCTCAGTCCATGTACTCGCAGGC
ACTGCGGCAGGCGCACCCTAAATCCCCGTCTCCACCGCGACCTCGAGGCG
AGGTTTTGGTCGCTCCTCCAAAGACGCCACCCCGTGAAACCGGGAAGGAA
AACTTACCCTGTACGAAGCCGACCGCGGACAAGTACACCGATCCCAGTAG
CACAACAGGTGGGGTTCCTGAGAGGAACACGGGTGGGTGTGTTGACTTGA
CAGGCGACTATCGCATCACCAAGAGCCATCCCGACGAGGTTGAACCTGGT
GTAACCTTCGGCTGTGCAGGCGGAAGGGAAGTGGTGGTTCGCGGTTTTGG
TTCCACCGCGCTCTCATCCGTCGCACCGCTCGGGCAACGAACCGCAAACG
GTGGCCCCAGTGCCACGAATGCTGCTCAAGTAAAAGGTGAGGTGGTGGCA
CCGAGCGCTCCGTCCTGTGGCAGCGGCTTTTCAAGAGAAAAAAAAATAGG
CGCAAATATAGCGGATTCTGCTTGCGGGGGCCGTGGCAACAGTGGCCCCG
ATCGTATCGGGGTTGGAAGCAAGAGCAACGGGAGTACCTCGCTGACAGAT
CGGCAACGACAGATAATGCTGGAGAACCGAGAAAAGGCGCTTGCTCGGCT
CAAGCAGCGGCAGCAGGAGGCAGCAGCAGCCCAGGCGGGTGTCGGTCGAC
CAGTTGGCGCTATTGCGACGGTGCCGACCGCAGCATCAAGTAGATATATC
CCGAAGACGGCGCGAGCAGGCCCTGGCGCCGGTGGGCCTCCTGAACCCGG
TCCTGAAGCGAGACAGAGCTCAACGAGTTTGGCGCAGCGGGGGAGGTTCC
GGATGACCATGGACATGGAGTCCGATGACGATTCCGACGCGGAGAACGGA
GAAAAGAATGCATCGAACCCCCCCCCTCCCCCCATCGTCGCCTTGTCGGC
GTCGTCGTCGTCCGCGCATGTCGCGGCTGTGAGCTGCACAATCCGAGATC
GGGGAGTCACAGCAAAGAGCACGATGACTACAATTGGTAATGTTGGTCAG
AGGGCGGCCGCTCCGCAGCGTCTGGGATCACCGTCTGCAGCACTTGCTTC
GGCATCGGCAAAGTCAACGATCGGCGCTACTTCTACAACAATCTTGCTCA
CCACCCTCGCGTTGTCCGCGCCGCGGGCGCACGCCCTTGAGTCTCTGGCG
GCGGAGCTTCGATCCCGTGAGGGATTCGCCGTCCACGCCTCTCCCCTCGG
GGGCGGCTCCCGTGACGTGGACCTCGCCGTGGGCTCGCAGTGCGCCGTGT
GTGTGCGCAGCGTGCGGCAGTTTCTTGCACAGACACAAGTCTCTTCGGCG
GCGGCGCCTCCGTCTCCATCTTCATACGTGTCTCCTCGATCATCGGGCGG
CGGAAATCACGCTCTTGCTGCCGGCGACTCCGTGAAACCAGCGCTTCTTG
TGCTGCTAGAGACGGCCCTGCAGCGTTACGCGCGCGTCGTCGTGATCGTG
GAGGGACTAAATGGTGAGCAGCTGCAGCTGCGGCGGGAGGCTACTGGGAA
AGTGGAGACTTTGCGCGGGGCTTCCGTCGTGCCTAGCGACGGATGGCGTG
TGACAGCAGACAAGGTGGTGGCGCTGGTGGAGCAAGAGGCTGTCGCAGGG
GTTGGTCTCCCAGTGGAGGTATGTGCATGTATGCATGCGTAATGGAGAGG
GGGAGAAAAGCGCAGCTTTTTTCGAAGCGTGGAAGGAAAATAGGGTAGAC
GGGTGGTTTGATTTTTTGCTTATGTTTCTTAAGTTCGACCATGATCGATG
GTTCAGGCTCATTTCATATTAATCCAACAACGATAGATTAGCTCAAGAAC
GCCTCTTTATTTCTCGCTTGTTTCACCCTCCTCGCCGCCGCTCCTCGTGT
CTGGTTCCGCAGGTGACCGGCCCGTCGCTGAACACGGCTCAGGAGAAATT
CCTGGCGTTCTTGCTGCGGGCGCCCACACTGTCGTACCCCGGGGGGCTCT
ATTTGCTGCAGGCGTTCCGAGGGCGTTCCGGCAAAGAGATGATTGCCAGG
TGCGTCGTCTCCGGCTGCGGGGGGGAGTAAAACACGCTATGATGCACGCT
TCAGGCGGTATTTTAATGTTGGAGAGTGGAGCTCCGCCACAGACGGACGG
GCGAGAAGTCTACGCAAAAAACGCACGCTTATATTGTTTGTGTCTTTGGG
TAAAACCGCCTGGGTATAGATTGTGTTTTGCGACGGTGTACGCGGGACTT
TCGTTACCGTCCGCGCGCAAAAGTGCCGCTCGTCCTTTCGTAGCACTCGT
AAATTGCGCGTCCTGTCGCTGGAGAGTTGTTCGAGCTTACATGCGGGTTG
GCTTTTCTTGGATAAAAAGCCCGCACTGTGGTGGTGGCTGTATAATGCTT
TCCCGCCGACCGCATGAAAGTCCCCGTTATTATTTACGCTGTTCATAGAA
AACACGGGCGGGAGGGATAAGGGGGGGGGGGGGGGGGGGGGGCTTGGCAA
TCAAACAGGGCTTGCTTCGAGGTTATAACATTTTGGATAGGTGGGAAGAG
AGAACGAGTCCGGAGCTTCTCTCTATCTAATATATACATAAGTATTTGAT
GTGTTAGAGGCTAACGTTGTCTCCTGCGTATCTTTTTCCCTCTGTTCTGT
TGAAAAACGACATCTCTGCGCATCCATGTCTGTTTTTTTCTGTCTGCCGT
GACTTTGTTTGCTTTTTGAAACATGTGCAGTTCTGCCAAGGAGTTTCAGA
GCGCTGTGCCGGGTATGACAGCAAGACAGGCTGCCATGCTGAAGCGATTC
CTCGCTAGCGGTGGCGGCGCCGCTCAACCGATCGTGTCGAGGGCAGCCGG
AAGGACCTAAATACGAGTACCTCTCAGTGTCATGGTATATCTCGAGGGTA
GTGGTTGTGGTTCGAAGGATTCAGCGCGGCCAGGGTGGAATTTGATAGCG
CGCCGCGCGCATTGCTCGCGCGGGAGGCGTTGTGCGCGCGCGCCGATCCT
CTCAGCATTCCCGTTTTTAGCATAGATATAGCTTAGAGCGTTCGTTCGTA
TGTACGCGCCGAAAAATAAAACGGTAAGTGCAAGGACGGGATAAAATTGG
ACGGAGGCGATTTGTGCCGCGTTCCGAACGGGGGGAGAAGGGGAAGCTGA
ATAACGAAGTGGTCGCTTCGCAGGAACGGGGAGGAATGCGCCGCACTTGC
ACGTAAAGCGCTTGCGGTGGCCATCGATGATCCTTCCATTATGGGGGCGG
GTCTGTCTGCGTCGGCGCTACGTGGAGAAGCGGTTCGACCGGATGCATGC
GTTGCGGCTCTCATTCGCATATTTTATTAAAACGTATCACTCTGGCCCGA
AATATAAGCTAGATTTGGAAATTCGGGAATATAAGCCTAATTTGGATTAT
AACCGTCGTAGAGTGATTGTGCAGCTGTTCTATACGCGATGAAGTATGCA
TTTTTGGTGCGGTTGTATCGAAATATGGCCTAGGTATACCGGGGATGACT
TAAATGGTATCCCTGGGTTTCCTTGGGCTTTTAGCATTTTTGGCCAAATG
CTACCCTCAAACATCCAAAGAGCTCGTCCATCAGTGGGCGTCTCTCATTT
TCCTTGAGATACTCTCTGGGCACCTTCTCAGCAGCGCCTCCAGCAACGGA
CATGTCTTAACAGAAGATGGGGAGACCTTTACCCGGCGATTGGCACGCGA
GAGCTCTTCTTGCCCTTGCTCCCGGTGCTGTTGTGTGAAGGGCAAGATTG
TGCTATTTTGAAAAACAAGCTGAAACTGAAAGAGTTACGATGCTTTTATG
TCCCAAACCAACTTATACTTCGGGCCAGACTGGTACGTTTTTAATGCTCA
CCTTGGGTGCGGGTTAGGCTTTTTTTTATGCCATGGCCTCTTG
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Coding sequence (CDS) from alignment at H-elongata_contig10767:1400..7792-

>mRNA_H-elongata_contig10767.629.1 ID=mRNA_H-elongata_contig10767.629.1|Name=mRNA_H-elongata_contig10767.629.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4554bp|location=Sequence derived from alignment at H-elongata_contig10767:1400..7792- (Himanthalia elongata Himel1 dioecious)
ATGTACCTGCAACTCCTGGCGGAGTCGCCGTCGCCGAATCCTTTTCTCCG
CGGTGGCGACGTTGGCTCCTCTGATCGGCGCGCGGGAGGGCGCCACCCTC
GGGGTCGTGGCAGAGCGTCGGACCGCTTTGCGTTCATCAACGCGGTCATG
GCTCACGCACGGGACGGAGGAGACCTTTTAGAGATCGAGGAGGCGTGCAG
GTCCGATGGTTTCACCCAGGAAGGGTACGAGGGAACTCCGAAGGTGACGT
CACCAAGGCAGGAAAGAGGGAAGATGGCCCACGAGTGGTCACCGTCCACC
GCGATGTCCTCCGGAGGCTCGGGAGTGTCTCTTGGAGGATGTACCTGCAA
CTCCTGGCGGAGTCGCCGTCGCCGAATCCTTTTCTCCGCGGTGGCGACGT
TGGCTCCTCTGATCGGCGCGCGGGAGGGCGCCACCCTCGGGGTCGTGGCA
GAGCGTCGGACCGCTTTGCGTTCATCAACGCGGTCATGGCTCACGCACGG
GACGGAGGAGACCTTTTAGAGATCGAGGAGGCGTGCAGGTCCGATGGTTT
CACCCAGGAAGGGTACGAGGGAACTCCGAAGGTGACGTCACCAAGGCAGG
AAAGAGGGAAGATGGCCCACGAGTGGTCACCGTCCACCGCGATGTCCTCC
GGAGGCTCGGGAGTGTCTCTTGGAGGGCAAACCTCCCACTCCCGCGGTGG
CCACGACGCTCAGTCCATGTACTCGCAGGCACTGCGGCAGGCGCACCCTA
AATCCCCGTCTCCACCGCGACCTCGAGGCGAGGTTTTGGTCGCTCCTCCA
AAGACGCCACCCCGTGAAACCGGGAAGGAAAACTTACCCTGTACGAAGCC
GACCGCGGACAAGTACACCGATCCCAGTAGCACAACAGGTGGGGTTCCTG
AGAGGAACACGGGTGGGTGTGTTGACTTGACAGGCGACTATCGCATCACC
AAGAGCCATCCCGACGAGGTTGAACCTGGTGTAACCTTCGGCTGTGCAGG
CGGAAGGGAAGTGGTGGTTCGCGGTTTTGGTTCCACCGCGCTCTCATCCG
TCGCACCGCTCGGGCAACGAACCGCAAACGGTGGCCCCAGTGCCACGAAT
GCTGCTCAAGTAAAAGGTGAGGTGGTGGCACCGAGCGCTCCGTCCTGTGG
CAGCGGCTTTTCAAGAGAAAAAAAAATAGGCGCAAATATAGCGGATTCTG
CTTGCGGGGGCCGTGGCAACAGTGGCCCCGATCGTATCGGGGTTGGAAGC
AAGAGCAACGGGAGTACCTCGCTGACAGATCGGCAACGACAGATAATGCT
GGAGAACCGAGAAAAGGCGCTTGCTCGGCTCAAGCAGCGGCAGCAGGAGG
CAGCAGCAGCCCAGGCGGGTGTCGGTCGACCAGTTGGCGCTATTGCGACG
GTGCCGACCGCAGCATCAAGTAGATATATCCCGAAGACGGCGCGAGCAGG
CCCTGGCGCCGGTGGGCCTCCTGAACCCGGTCCTGAAGCGAGACAGAGCT
CAACGAGTTTGGCGCAGCGGGGGAGGTTCCGGATGACCATGGACATGGAG
TCCGATGACGATTCCGACGCGGAGAACGGAGAAAAGAATGCATCGAACCC
CCCCCCTCCCCCCATCGTCGCCTTGTCGGCGTCGTCGTCGTCCGCGCATG
TCGCGGCTGTGAGCTGCACAATCCGAGATCGGGGAGTCACAGCAAAGAGC
ACGATGACTACAATTGGTAATGTTGGTCAGAGGGCGGCCGCTCCGCAGCG
TCTGGGATCACCGTCTGCAGCACTTGCTTCGGCATCGGCAAAGTCAACGA
TCGGCGCTACTTCTACAACAATCTTGCTCACCACCCTCGCGTTGTCCGCG
CCGCGGGCGCACGCCCTTGAGTCTCTGGCGGCGGAGCTTCGATCCCGTGA
GGGATTCGCCGTCCACGCCTCTCCCCTCGGGGGCGGCTCCCGTGACGTGG
ACCTCGCCGTGGGCTCGCAGTGCGCCGTGTGTGTGCGCAGCGTGCGGCAG
TTTCTTGCACAGACACAAGTCTCTTCGGCGGCGGCGCCTCCGTCTCCATC
TTCATACGTGTCTCCTCGATCATCGGGCGGCGGAAATCACGCTCTTGCTG
CCGGCGACTCCGTGAAACCAGCGCTTCTTGTGCTGCTAGAGACGGCCCTG
CAGCGTTACGCGCGCGTCGTCGTGATCGTGGAGGGACTAAATGGTGAGCA
GCTGCAGCTGCGGCGGGAGGCTACTGGGAAAGTGGAGACTTTGCGCGGGG
CTTCCGTCGTGCCTAGCGACGGATGGCGTGTGACAGCAGACAAGGTGGTG
GCGCTGGTGGAGCAAGAGGCTGTCGCAGGGGTTGGTCTCCCAGTGGAGGC
AAACCTCCCACTCCCGCGGTGGCCACGACGCTCAGTCCATGTACTCGCAG
GCACTGCGGCAGGCGCACCCTAAATCCCCGTCTCCACCGCGACCTCGAGG
CGAGGTTTTGGTCGCTCCTCCAAAGACGCCACCCCGTGAAACCGGGAAGG
AAAACTTACCCTGTACGAAGCCGACCGCGGACAAGTACACCGATCCCAGT
AGCACAACAGGTGGGGTTCCTGAGAGGAACACGGGTGGGTGTGTTGACTT
GACAGGCGACTATCGCATCACCAAGAGCCATCCCGACGAGGTTGAACCTG
GTGTAACCTTCGGCTGTGCAGGCGGAAGGGAAGTGGTGGTTCGCGGTTTT
GGTTCCACCGCGCTCTCATCCGTCGCACCGCTCGGGCAACGAACCGCAAA
CGGTGGCCCCAGTGCCACGAATGCTGCTCAAGTAAAAGGTGAGGTGGTGG
CACCGAGCGCTCCGTCCTGTGGCAGCGGCTTTTCAAGAGAAAAAAAAATA
GGCGCAAATATAGCGGATTCTGCTTGCGGGGGCCGTGGCAACAGTGGCCC
CGATCGTATCGGGGTTGGAAGCAAGAGCAACGGGAGTACCTCGCTGACAG
ATCGGCAACGACAGATAATGCTGGAGAACCGAGAAAAGGCGCTTGCTCGG
CTCAAGCAGCGGCAGCAGGAGGCAGCAGCAGCCCAGGCGGGTGTCGGTCG
ACCAGTTGGCGCTATTGCGACGGTGCCGACCGCAGCATCAAGTAGATATA
TCCCGAAGACGGCGCGAGCAGGCCCTGGCGCCGGTGGGCCTCCTGAACCC
GGTCCTGAAGCGAGACAGAGCTCAACGAGTTTGGCGCAGCGGGGGAGGTT
CCGGATGACCATGGACATGGAGTCCGATGACGATTCCGACGCGGAGAACG
GAGAAAAGAATGCATCGAACCCCCCCCCTCCCCCCATCGTCGCCTTGTCG
GCGTCGTCGTCGTCCGCGCATGTCGCGGCTGTGAGCTGCACAATCCGAGA
TCGGGGAGTCACAGCAAAGAGCACGATGACTACAATTGGTAATGTTGGTC
AGAGGGCGGCCGCTCCGCAGCGTCTGGGATCACCGTCTGCAGCACTTGCT
TCGGCATCGGCAAAGTCAACGATCGGCGCTACTTCTACAACAATCTTGCT
CACCACCCTCGCGTTGTCCGCGCCGCGGGCGCACGCCCTTGAGTCTCTGG
CGGCGGAGCTTCGATCCCGTGAGGGATTCGCCGTCCACGCCTCTCCCCTC
GGGGGCGGCTCCCGTGACGTGGACCTCGCCGTGGGCTCGCAGTGCGCCGT
GTGTGTGCGCAGCGTGCGGCAGTTTCTTGCACAGACACAAGTCTCTTCGG
CGGCGGCGCCTCCGTCTCCATCTTCATACGTGTCTCCTCGATCATCGGGC
GGCGGAAATCACGCTCTTGCTGCCGGCGACTCCGTGAAACCAGCGCTTCT
TGTGCTGCTAGAGACGGCCCTGCAGCGTTACGCGCGCGTCGTCGTGATCG
TGGAGGGACTAAATGGTGAGCAGCTGCAGCTGCGGCGGGAGGCTACTGGG
AAAGTGGAGACTTTGCGCGGGGCTTCCGTCGTGCCTAGCGACGGATGGCG
TGTGACAGCAGACAAGGTGGTGGCGCTGGTGGAGCAAGAGGCTGTCGCAG
GGGTTGGTCTCCCAGTGGAGGTGACCGGCCCGTCGCTGAACACGGCTCAG
GAGAAATTCCTGGCGTTCTTGCTGCGGGCGCCCACACTGTCGTACCCCGG
GGGGCTCTATTTGCTGCAGGCGTTCCGAGGGCGTTCCGGCAAAGAGATGA
TTGCCAGGTGACCGGCCCGTCGCTGAACACGGCTCAGGAGAAATTCCTGG
CGTTCTTGCTGCGGGCGCCCACACTGTCGTACCCCGGGGGGCTCTATTTG
CTGCAGGCGTTCCGAGGGCGTTCCGGCAAAGAGATGATTGCCAGTTCTGC
CAAGGAGTTTCAGAGCGCTGTGCCGGGTATGACAGCAAGACAGGCTGCCA
TGCTGAAGCGATTCCTCGCTAGCGGTGGCGGCGCCGCTCAACCGATCGTG
TCGAGGGCAGCCGGAAGGACCTAATTCTGCCAAGGAGTTTCAGAGCGCTG
TGCCGGGTATGACAGCAAGACAGGCTGCCATGCTGAAGCGATTCCTCGCT
AGCGGTGGCGGCGCCGCTCAACCGATCGTGTCGAGGGCAGCCGGAAGGAC
CTAA
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