mRNA_H-elongata_contig10758.625.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig10758.625.1
Unique NamemRNA_H-elongata_contig10758.625.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig10758.625.1 vs. uniprot
Match: D7G4Q9_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Q9_ECTSI)

HSP 1 Score: 809 bits (2089), Expect = 4.610e-289
Identity = 420/454 (92.51%), Postives = 431/454 (94.93%), Query Frame = 2 
Query:  110 MAEQQPPDVPSGDAARASTVDLESKEIWGDGADQLDEEILKMGTDELRQRMRLLDNEIRIMRSDTDRIRHESATQRDKIKDNKEKIKLNKQLPWLVGNVVEILDPEDDPDEEE-DGGAQDIDATRQAKSAVMKTSTRQTIYLPVPGLVPTAELTPGDLVGTNKDSYLILEKLPAEYDNRVKAMEVDEKPTEEYSDIGGLDKEIQELIEAVVLPMTHKHMFDNIGIRPPKGILLHGPPGTGKTLLARACAKQTDAIFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKCKDQSKGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFSSNEKIKVIAATNRPDVLDPALLRSGRLDRKIELPHPSEEARGRILQIHSRKMNVDKGDVNFEELARSCEDFNGAQLKAVCVEAGMLALRREAEQIKHEDFMEGINVVSAKKKGSLDYYA 1468
            MA+ QPP   +  AA A+T DLESKEIWGD ADQLDEEI+KMG++ELRQRMRLLDNEIRIMRSD DRIRHESATQ+DKIK+NK    LNKQLPWLVGNVVEILDPEDDP+    DGGAQDIDATR AKSAVMKTSTRQTIYLPVPGLVPT ELTPGDLVGTNKDSYLILEKLPAEYDNRVKAMEVDEKPTEEYSDIGGLDKEIQELIEAVVLPMTHKHMFDNIGIRPPKGILLHGPPGTGKTLLARACAKQTDAIFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKCKDQ KGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFSSN+KIKVIAATNRPDVLDPALLRSGRLDRKIELPHPSEEARGRILQIHSRKMNVDK DVNFEELARSC+DFNGAQLKAVCVEAGMLALRREAEQIKHED MEGINVVSAKKKGSLDYYA
Sbjct:    1 MADPQPPSADAAPAA-AATADLESKEIWGDEADQLDEEIMKMGSEELRQRMRLLDNEIRIMRSDQDRIRHESATQKDKIKENKXXXXLNKQLPWLVGNVVEILDPEDDPEXXXXDGGAQDIDATRSAKSAVMKTSTRQTIYLPVPGLVPTEELTPGDLVGTNKDSYLILEKLPAEYDNRVKAMEVDEKPTEEYSDIGGLDKEIQELIEAVVLPMTHKHMFDNIGIRPPKGILLHGPPGTGKTLLARACAKQTDAIFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKCKDQQKGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFSSNDKIKVIAATNRPDVLDPALLRSGRLDRKIELPHPSEEARGRILQIHSRKMNVDKSDVNFEELARSCDDFNGAQLKAVCVEAGMLALRREAEQIKHEDLMEGINVVSAKKKGSLDYYA 453
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BLAST of mRNA_H-elongata_contig10758.625.1 vs. uniprot
Match: A0A836CGA2_9STRA (26S protease regulatory subunit 6A-A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGA2_9STRA)

HSP 1 Score: 739 bits (1907), Expect = 1.020e-261
Identity = 376/434 (86.64%), Postives = 402/434 (92.63%), Query Frame = 2 
Query:  167 VDLESKEIWGDGADQLDEEILKMGTDELRQRMRLLDNEIRIMRSDTDRIRHESATQRDKIKDNKEKIKLNKQLPWLVGNVVEILDPEDDPDEEEDGGAQDIDATRQAKSAVMKTSTRQTIYLPVPGLVPTAELTPGDLVGTNKDSYLILEKLPAEYDNRVKAMEVDEKPTEEYSDIGGLDKEIQELIEAVVLPMTHKHMFDNIGIRPPKGILLHGPPGTGKTLLARACAKQTDAIFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKCKDQSKGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFSSNEKIKVIAATNRPDVLDPALLRSGRLDRKIELPHPSEEARGRILQIHSRKMNVDKGDVNFEELARSCEDFNGAQLKAVCVEAGMLALRREAEQIKHEDFMEGINVVSAKKKGSLDYYA 1468
             DLE  EIWG   + +D+EIL MG +ELRQRMRLLDNEIRIMRSD +RIRHES TQR+KIK+N   +KLNKQLPWLVGNV+E+L   D+P+EEEDG A D DA+R  KS VMKTSTRQTI+LP+PGLVP  ELTPGDLVGTNKDSYLILEKLPAE+DNRVKAMEVDEKPTEEYSDIGGLDK+IQELIEAVVLPMTHKHMFDNIGIR PKG+LL+GPPGTGKTLLARACAKQTDAIFLKLAGPQLVQMFIGDGAKLVRDAFELAKEK KDQ KGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELL+QLDGFSSN+KIKVIAATNRPDVLDPALLRSGRLDRKIELPHPSEEAR RILQIHSRKMNV+KGDVNFEEL+RSC+DFNGAQLKAVCVEAGMLALRR A +I+HEDFMEGI VVSAKKKGSLDYYA
Sbjct:    2 ADLEGDEIWGGEGEGIDQEILAMGNEELRQRMRLLDNEIRIMRSDMERIRHESNTQREKIKENXXXVKLNKQLPWLVGNVIEVLSLTDEPEEEEDGAAMDTDASRSGKSCVMKTSTRQTIFLPIPGLVPVDELTPGDLVGTNKDSYLILEKLPAEFDNRVKAMEVDEKPTEEYSDIGGLDKQIQELIEAVVLPMTHKHMFDNIGIRAPKGVLLYGPPGTGKTLLARACAKQTDAIFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKVKDQGKGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLSQLDGFSSNDKIKVIAATNRPDVLDPALLRSGRLDRKIELPHPSEEARARILQIHSRKMNVNKGDVNFEELSRSCDDFNGAQLKAVCVEAGMLALRRGASEIRHEDFMEGIAVVSAKKKGSLDYYA 435
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BLAST of mRNA_H-elongata_contig10758.625.1 vs. uniprot
Match: A0A6V1PEK8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PEK8_HETAK)

HSP 1 Score: 705 bits (1819), Expect = 2.460e-248
Identity = 356/436 (81.65%), Postives = 398/436 (91.28%), Query Frame = 2 
Query:  161 STVDLESKEIWGDGADQLDEEILKMGTDELRQRMRLLDNEIRIMRSDTDRIRHESATQRDKIKDNKEKIKLNKQLPWLVGNVVEILDPEDDPDEEEDGGAQDIDATRQAKSAVMKTSTRQTIYLPVPGLVPTAELTPGDLVGTNKDSYLILEKLPAEYDNRVKAMEVDEKPTEEYSDIGGLDKEIQELIEAVVLPMTHKHMFDNIGIRPPKGILLHGPPGTGKTLLARACAKQTDAIFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKCKDQSKGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFSSNEKIKVIAATNRPDVLDPALLRSGRLDRKIELPHPSEEARGRILQIHSRKMNVDKGDVNFEELARSCEDFNGAQLKAVCVEAGMLALRREAEQIKHEDFMEGINVVSAKKKGSLDYYA 1468
            ++ D+ESKEIWGD AD++D+EIL+MG +E+RQR+RLLDN IRIMRSD  RI HE+  Q++K+KDN EK+KLNKQLP+LVGNVVE+L+ E +      G A D+DA R+  SAV+KTSTRQTI+LP+PGLVPT EL PG+LVGTNKDSYLILEKLPAEYD+RVKAMEVDEKPTEEYSDIGGLDK+IQELIEAVVLPMTHK MFD IGIRPPKG+LLHGPPGTGKT+LARACAKQT+AIFLKLAGPQLVQMFIGDGAKLVRDAFELAKEK ++Q   GAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELL+QLDGF SN+KIKVIAATNRPDVLDPALLRSGRLDRK+ELPHP+EEAR RILQIHSRKMNVDK DVNF+EL RSC+DFNGAQLKAVCVEAGMLALRR A +IKHEDFMEGI VV+AKKKG+L+YYA
Sbjct:    2 ASKDIESKEIWGDDADEIDQEILEMGVEEIRQRIRLLDNNIRIMRSDMQRISHETNAQKEKVKDNNEKVKLNKQLPYLVGNVVEMLEMEPEXXXXXXGAAADVDAGRKGVSAVIKTSTRQTIFLPIPGLVPTEELKPGELVGTNKDSYLILEKLPAEYDSRVKAMEVDEKPTEEYSDIGGLDKQIQELIEAVVLPMTHKEMFDTIGIRPPKGVLLHGPPGTGKTMLARACAKQTEAIFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKVQEQGAKGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLSQLDGFQSNDKIKVIAATNRPDVLDPALLRSGRLDRKVELPHPTEEARARILQIHSRKMNVDKEDVNFDELGRSCDDFNGAQLKAVCVEAGMLALRRAAAEIKHEDFMEGITVVAAKKKGNLNYYA 437
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BLAST of mRNA_H-elongata_contig10758.625.1 vs. uniprot
Match: A0A7S2UXQ0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXQ0_9STRA)

HSP 1 Score: 696 bits (1796), Expect = 7.570e-245
Identity = 354/436 (81.19%), Postives = 398/436 (91.28%), Query Frame = 2 
Query:  161 STVDLESKEIWGDGADQLDEEILKMGTDELRQRMRLLDNEIRIMRSDTDRIRHESATQRDKIKDNKEKIKLNKQLPWLVGNVVEILDPEDDPDEEEDGGAQDIDATRQAKSAVMKTSTRQTIYLPVPGLVPTAELTPGDLVGTNKDSYLILEKLPAEYDNRVKAMEVDEKPTEEYSDIGGLDKEIQELIEAVVLPMTHKHMFDNIGIRPPKGILLHGPPGTGKTLLARACAKQTDAIFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKCKDQSKGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFSSNEKIKVIAATNRPDVLDPALLRSGRLDRKIELPHPSEEARGRILQIHSRKMNVDKGDVNFEELARSCEDFNGAQLKAVCVEAGMLALRREAEQIKHEDFMEGINVVSAKKKGSLDYYA 1468
            +T DLESK+IWG+  +++D+EIL+M T+ELRQR+RLLDN+IRIMRSD  RI HE+ TQR+KIK+N +KIKLNKQLP+LVGNVVEIL+   + +EEEDG AQDIDA R   SAV+KTS RQTIYLPVPGLV   EL PG+L+GTNKDSYLILEKLPAEYD+RVKAMEVDEKPTEEYSDIGGLDK+IQEL+EAVVLPMTHK MF+ IGIRPPKG+LL+GPPGTGKT+LARACAK TDA+FLKLAGPQLVQMFIGDGAKLVRDAF+LAKEK K++ + GAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELL+QLDGF+S   IKVIAATNRPDVLDPALLRSGRLDRKIELPHP+EEAR RILQIHSRKMNV+  DVNFEEL+RSC+DFNGAQLKAVCVEAGMLALRREA +I HEDFMEGI+VV+AKKK SL+YYA
Sbjct:    2 ATEDLESKDIWGEDGEEIDQEILQMSTEELRQRIRLLDNDIRIMRSDMQRINHETNTQREKIKENNDKIKLNKQLPYLVGNVVEILELGQEDEEEEDGAAQDIDAQRAGVSAVIKTSHRQTIYLPVPGLVDVKELKPGELIGTNKDSYLILEKLPAEYDSRVKAMEVDEKPTEEYSDIGGLDKQIQELVEAVVLPMTHKEMFETIGIRPPKGVLLYGPPGTGKTMLARACAKHTDAVFLKLAGPQLVQMFIGDGAKLVRDAFDLAKEKTKNEDRKGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLSQLDGFTSANNIKVIAATNRPDVLDPALLRSGRLDRKIELPHPTEEARARILQIHSRKMNVNHEDVNFEELSRSCDDFNGAQLKAVCVEAGMLALRREANEIVHEDFMEGISVVAAKKKASLNYYA 437
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BLAST of mRNA_H-elongata_contig10758.625.1 vs. uniprot
Match: K3WL48_GLOUD (AAA domain-containing protein n=23 Tax=Oomycota TaxID=4762 RepID=K3WL48_GLOUD)

HSP 1 Score: 694 bits (1791), Expect = 3.880e-244
Identity = 358/432 (82.87%), Postives = 389/432 (90.05%), Query Frame = 2 
Query:  173 LESKEIWGDGADQLDEEILKMGTDELRQRMRLLDNEIRIMRSDTDRIRHESATQRDKIKDNKEKIKLNKQLPWLVGNVVEILDPEDDPDEEEDGGAQDIDATRQAKSAVMKTSTRQTIYLPVPGLVPTAELTPGDLVGTNKDSYLILEKLPAEYDNRVKAMEVDEKPTEEYSDIGGLDKEIQELIEAVVLPMTHKHMFDNIGIRPPKGILLHGPPGTGKTLLARACAKQTDAIFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKCKDQSKGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFSSNEKIKVIAATNRPDVLDPALLRSGRLDRKIELPHPSEEARGRILQIHSRKMNVDKGDVNFEELARSCEDFNGAQLKAVCVEAGMLALRREAEQIKHEDFMEGINVVSAKKKGSLDYYA 1468
            LES EIWG   + LD EIL M  +ELRQR+RLLDN+IRIMRSD  RI HES +QR++IK+N EK+KLNKQLP+LVGNVVEIL+ EDD DE+ DG A D+DA R+ KSAV+KTSTRQTI+LP+PGLV +  L P DLVGTNKDSYLILEKLPAEYD+RVKAMEVDEKPTEEYSDIGGLDK+IQELIEAVVLPMTHK  FD IGI+PPKG+LLHGPPGTGKTLLARACAKQTDAIFLKLA PQLVQMFIGDGAKLVRDAFELAKEKCKDQ +GGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGF+SN  IKVIAATNRPDVLDPALLRSGRLDRKIELPHP+EEAR RILQIHSRKMNVD  D NF+ELAR  +DFNGAQLKAVCVEAGMLALRR++  IKHEDFMEGI+VVSAKKK +L YYA
Sbjct:    4 LESNEIWGSAEEGLDPEILLMSNEELRQRIRLLDNDIRIMRSDIQRINHESNSQRERIKENNEKVKLNKQLPYLVGNVVEILELEDDEDEQ-DGAATDVDAQRKGKSAVIKTSTRQTIFLPIPGLVDSESLIPNDLVGTNKDSYLILEKLPAEYDSRVKAMEVDEKPTEEYSDIGGLDKQIQELIEAVVLPMTHKEKFDAIGIQPPKGVLLHGPPGTGKTLLARACAKQTDAIFLKLAAPQLVQMFIGDGAKLVRDAFELAKEKCKDQKRGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFTSNTNIKVIAATNRPDVLDPALLRSGRLDRKIELPHPTEEARARILQIHSRKMNVDTEDTNFDELARCTDDFNGAQLKAVCVEAGMLALRRDSTVIKHEDFMEGISVVSAKKKATLQYYA 434
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BLAST of mRNA_H-elongata_contig10758.625.1 vs. uniprot
Match: A0A024UII9_9STRA (26S protease regulatory subunit 6A n=13 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024UII9_9STRA)

HSP 1 Score: 670 bits (1729), Expect = 1.050e-234
Identity = 350/432 (81.02%), Postives = 384/432 (88.89%), Query Frame = 2 
Query:  173 LESKEIWGDGADQLDEEILKMGTDELRQRMRLLDNEIRIMRSDTDRIRHESATQRDKIKDNKEKIKLNKQLPWLVGNVVEILDPEDDPDEEEDGGAQDIDATRQAKSAVMKTSTRQTIYLPVPGLVPTAELTPGDLVGTNKDSYLILEKLPAEYDNRVKAMEVDEKPTEEYSDIGGLDKEIQELIEAVVLPMTHKHMFDNIGIRPPKGILLHGPPGTGKTLLARACAKQTDAIFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKCKDQSKGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFSSNEKIKVIAATNRPDVLDPALLRSGRLDRKIELPHPSEEARGRILQIHSRKMNVDKGDVNFEELARSCEDFNGAQLKAVCVEAGMLALRREAEQIKHEDFMEGINVVSAKKKGSLDYYA 1468
            LE  +IWG    +++ +IL M  DEL+QR+RLLDNEIRIMRSD  RI HES TQR++IK+N EK+KLNKQLP+LVGNVVEIL  E++ D+E+DG A D D  R+ KSAV+KTSTRQTI+L +PGLV    L P DLVGTNKDSYLILEKLPAEYD+RVKAMEVDEKPTE+YSDIGGLDK+IQEL+EAVVLPMTH   F  IGI+PPKG+LL+GPPGTGKTLLARACAKQTDAIFLKLA PQLVQMFIGDGAKLVRDAFELAKEKCKD++KGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGF+SN KIKVIAATNRPDVLDPALLRSGRLDRKIELPHPSEEAR RI+QIHSRKMNVD  DVNF+ELAR  +DFNGAQLKAVCVEAGMLALRREA  IKHEDFMEGI VVSAKKK +L YYA
Sbjct:   10 LEGGDIWG----EIEPDILGMTNDELKQRIRLLDNEIRIMRSDITRINHESQTQRERIKENNEKVKLNKQLPYLVGNVVEILAMENE-DDEQDGAAADADVGRKGKSAVIKTSTRQTIFLSIPGLVDAESLIPNDLVGTNKDSYLILEKLPAEYDSRVKAMEVDEKPTEDYSDIGGLDKQIQELVEAVVLPMTHMERFLAIGIQPPKGVLLYGPPGTGKTLLARACAKQTDAIFLKLAAPQLVQMFIGDGAKLVRDAFELAKEKCKDKNKGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFTSNTKIKVIAATNRPDVLDPALLRSGRLDRKIELPHPSEEARARIMQIHSRKMNVDMEDVNFDELARCTDDFNGAQLKAVCVEAGMLALRREATIIKHEDFMEGIGVVSAKKKATLQYYA 436
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BLAST of mRNA_H-elongata_contig10758.625.1 vs. uniprot
Match: F0YJM7_AURAN (AAA domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJM7_AURAN)

HSP 1 Score: 663 bits (1711), Expect = 4.020e-232
Identity = 341/422 (80.81%), Postives = 381/422 (90.28%), Query Frame = 2 
Query:  206 DQLDEEILKMGTDELRQRMRLLDNEI-RIMRSDTDRIRHESATQRDKIKDNKEKIKLNKQLPWLVGNVVEILDPEDDPDEEEDGGAQDIDATRQAKSAVMKTSTRQTIYLPVPGLVPTAELTPGDLVGTNKDSYLILEKLPAEYDNRVKAMEVDEKPTEEYSDIGGLDKEIQELIEAVVLPMTHKHMFDNIGIRPPKGILLHGPPGTGKTLLARACAKQTDAIFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKCKDQSKGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFSSNEKIKVIAATNRPDVLDPALLRSGRLDRKIELPHPSEEARGRILQIHSRKMNVDKGDVNFEELARSCEDFNGAQLKAVCVEAGMLALRREAEQIKHEDFMEGINVVSAKKKGSLDYYA 1468
            D LD EI+ M +DE+RQR RL++N++ RIM+S+  RI+HES  QR++IK+N++KIKLNKQLP+LVGN++E+L+ E   D EEDG AQD+D  R  KS V++TSTRQTIYLPVPGLV T ELTPG+LVGTNKDSYLILEKLPAE+D+RVKAMEVDEKPTEEYSDIGG DK+I ELIEAVVLPMTH  MF  IGIRPPKG+LLHGPPGTGKTLLARACAKQTDAIFLKLAGPQLVQMFIGDGAKLVRDAFELAKEK    +K GAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELL+QLDGFSS++KIKVIAATNRPDVLDPALLRSGRLDRKIELPHP+E AR RI+QIHSRKMNVDK DVNFEELAR C+DFNGAQ KAVCVEAGMLALRREA  +KHEDFMEGI++V+AKKKGSL+YYA
Sbjct:    7 DDLDPEIMTMTSDEIRQRKRLIENDVVRIMKSEIQRIKHESEAQRERIKENQDKIKLNKQLPYLVGNIIEVLELES-VDGEEDGMAQDVDLNRSGKSVVIRTSTRQTIYLPVPGLVDTKELTPGELVGTNKDSYLILEKLPAEFDSRVKAMEVDEKPTEEYSDIGGCDKQINELIEAVVLPMTHAEMFSAIGIRPPKGVLLHGPPGTGKTLLARACAKQTDAIFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKVNAGNKSGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLSQLDGFSSDDKIKVIAATNRPDVLDPALLRSGRLDRKIELPHPTETARARIMQIHSRKMNVDKDDVNFEELARCCDDFNGAQCKAVCVEAGMLALRREAAFVKHEDFMEGISIVAAKKKGSLEYYA 427
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BLAST of mRNA_H-elongata_contig10758.625.1 vs. uniprot
Match: A0A7S0C264_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C264_9STRA)

HSP 1 Score: 654 bits (1688), Expect = 1.140e-228
Identity = 336/426 (78.87%), Postives = 384/426 (90.14%), Query Frame = 2 
Query:  203 ADQLDEEILKMGTDELRQRMRLLDNEIRIMRSDTDRIRHESATQRDKIKDNKEKIKLNKQLPWLVGNVVEILDPEDDPD----EEEDGGAQDIDATRQAKSAVMKTSTRQTIYLPVPGLVPTAELTPGDLVGTNKDSYLILEKLPAEYDNRVKAMEVDEKPTEEYSDIGGLDKEIQELIEAVVLPMTHKHMFDNIGIRPPKGILLHGPPGTGKTLLARACAKQTDAIFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKCKDQSKGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFSSNEKIKVIAATNRPDVLDPALLRSGRLDRKIELPHPSEEARGRILQIHSRKMNVDKGDVNFEELARSCEDFNGAQLKAVCVEAGMLALRREAEQIKHEDFMEGINVVSAKKKGSLDYYA 1468
            +D+LD+E L M T+ELRQR+RLLDN+IRIMRSD  RI HE   Q+++IK+N EK+KLNKQLP+LVGNVVEIL+P+ +      EEEDGGA D+DA R+ +SAV++TSTRQTI+LPVPGLV T EL P DLVGTNKDSYLILEKLPAE+D+RVKAME+DEKP+EEYSDIGG+DK+IQELIEAVVLPMTHK MFD IGI+PPKG+LLHGPPGTGKTLLARACA QT+A+FLKLAGPQLVQMFIGDGAKL+RDAFELAKEK K  +  GAI+FIDE+DAIGTKRFGG+QSGDREVQRTMLELL+QLDGFSSNE IKVIAATNRPDVLDPALLRSGRLDRKIELPHP+EEAR +IL+IHSRKMN+   DV +EELARSC+DFNGAQLKAVCVEAGMLALRRE  +I HEDF+EGI+ V+AKKKGSLDY+A
Sbjct:    1 SDELDDETLAMPTNELRQRIRLLDNDIRIMRSDVQRITHERVGQQERIKENVEKVKLNKQLPYLVGNVVEILEPDAEDGLEEMEEEDGGAADVDAQRKTRSAVIRTSTRQTIFLPVPGLVDTDELKPSDLVGTNKDSYLILEKLPAEFDSRVKAMEIDEKPSEEYSDIGGVDKQIQELIEAVVLPMTHKDMFDTIGIKPPKGVLLHGPPGTGKTLLARACANQTNAVFLKLAGPQLVQMFIGDGAKLIRDAFELAKEKIKTGTAAGAILFIDEIDAIGTKRFGGDQSGDREVQRTMLELLSQLDGFSSNEMIKVIAATNRPDVLDPALLRSGRLDRKIELPHPTEEARVKILKIHSRKMNI-SSDVVYEELARSCDDFNGAQLKAVCVEAGMLALRREVSEICHEDFIEGISEVAAKKKGSLDYFA 425
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BLAST of mRNA_H-elongata_contig10758.625.1 vs. uniprot
Match: A0A7S2UP47_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UP47_9STRA)

HSP 1 Score: 652 bits (1682), Expect = 3.590e-227
Identity = 340/455 (74.73%), Postives = 388/455 (85.27%), Query Frame = 2 
Query:  170 DLESKEIWGDG-----------------ADQ-LDEEILKMGTDELRQRMRLLDNEIRIMRSDTDRIRHESATQRDKIKDNKEKIKLNKQLPWLVGNVVEILDPED----DPDEEEDGGAQDIDATRQAKSAVMKTSTRQTIYLPVPGLVPTAELTPGDLVGTNKDSYLILEKLPAEYDNRVKAMEVDEKPTEEYSDIGGLDKEIQELIEAVVLPMTHKHMFDNIGIRPPKGILLHGPPGTGKTLLARACAKQTDAIFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKCKDQSKGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFSSNEKIKVIAATNRPDVLDPALLRSGRLDRKIELPHPSEEARGRILQIHSRKMNVDKGDVNFEELARSCEDFNGAQLKAVCVEAGMLALRREAEQIKHEDFMEGINVVSAKKKGSLDYYA 1468
            DLE  +IWG+                  AD+ LD+E   M   ELRQR+ LLDN+IRIMRSD  RI HES  QRD+I++N EK+K+NKQLP+LVGNVVE+L+PE     D  EE++G A D+DA R+ +SAV++TSTRQTIYLP+PGLV T EL P DLVGTNKDSYLILEKLP+E+D+RVKAMEVDE+PTEEYSDIGG DK+IQELIEAVVLPMTHK MFD IGI+PPKG+LL+GPPGTGKTLLARACA QT+A+FLK+AGPQLVQMFIGDGAKL+RDAFE+AKEK K  +  GAIIFIDE+DAIGTKRFGG+QSGDREVQRTMLELL+QLDGFSSNE IKVIAATNRPDVLDPALLRSGRLDRKIELPHP EEAR +I++IHSRKMNV   DV FEELARSC+DFNGAQLKAVCVEAGMLALRRE+ +I HEDF+EGI+VVSAKKKGSLDY+A
Sbjct:    9 DLEGADIWGESSAAVAAPAPEAEAAAPEADEGLDDETRHMSNSELRQRIHLLDNDIRIMRSDIQRITHESHAQRDRIRENMEKVKVNKQLPYLVGNVVEVLEPEAEDGLDNAEEDEGAAADVDANRKTRSAVIRTSTRQTIYLPIPGLVDTEELKPSDLVGTNKDSYLILEKLPSEFDSRVKAMEVDERPTEEYSDIGGCDKQIQELIEAVVLPMTHKDMFDTIGIKPPKGVLLYGPPGTGKTLLARACANQTNAVFLKIAGPQLVQMFIGDGAKLIRDAFEMAKEKIKSGTSAGAIIFIDEIDAIGTKRFGGDQSGDREVQRTMLELLSQLDGFSSNEMIKVIAATNRPDVLDPALLRSGRLDRKIELPHPGEEARAKIMRIHSRKMNVGS-DVVFEELARSCDDFNGAQLKAVCVEAGMLALRRESPEISHEDFIEGISVVSAKKKGSLDYFA 462
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BLAST of mRNA_H-elongata_contig10758.625.1 vs. uniprot
Match: A0A0P1B831_PLAHL (26s protease regulatory subunit 6a n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B831_PLAHL)

HSP 1 Score: 670 bits (1729), Expect = 7.200e-225
Identity = 352/441 (79.82%), Postives = 384/441 (87.07%), Query Frame = 2 
Query:  170 DLESKEIWGDGADQLDEEILKMGTDELRQRMRLLDNEIRIMRSDTDRIRHESATQRDKIKDNKEKIKLNKQLPWLVGNVVEILDPEDDPDEEEDGGAQDIDATRQAKSAVMKTSTRQTIYLPVPGLVPTAELTPGDLVGTNKDSYLILEKLPAEYDNRVKAMEVDEKPTEEYSDIGGLDKEIQELIEAVVLPMTHKHMFDNIGIRPPKGILLHGPPGTGKTLLARACAKQTDAIFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKCKDQSKGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFSSNEKIKVIAATNRPDVLDPALLRSGRLDRKIELPHPSEEARGRILQIHSRKMNVDKGDVNFEELARSCEDFNGAQLKAVCVEAGMLALRREAEQIKHEDFMEGINVVSAKKKGSLDYYA*CFFLLSR 1492
            +LES EIWG   +QLD EIL M  +ELRQR+RLLDN IRIMRSD  RI HES +QR++IK+N EK+KLNKQLP+LV NVVE+L+ EDD DE+ DG A D+DA R+ KSAV+KTSTRQTI+LP+PGLV +  L P DLVG NKDSYLILEKLP+EYD+RVKAMEVDEKPTEEYSDIGGLDK+IQEL+EAVVLPMTHK  F+ IGI PPKG+LLHGPPGTGKTLLARACAKQTDAIFLKLA PQLVQMFIGDGAKLVRDAFELAKEKCKDQ +GGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGF+SN KIKVIAATNRPDVLDPALLRSGRLDRKIELPHP+EEAR RILQIHSRKMNVD  D NF+ELARS +DFNGAQLKAVCVEAGMLALRRE+  IKHEDFMEGI         SLD Y   +F L R
Sbjct:  448 ELESSEIWG-ADEQLDPEILLMSNEELRQRIRLLDNNIRIMRSDIQRINHESNSQRERIKENNEKVKLNKQLPYLVANVVEVLELEDDEDEQ-DGAATDVDAARKGKSAVIKTSTRQTIFLPIPGLVDSTTLIPNDLVGVNKDSYLILEKLPSEYDSRVKAMEVDEKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFEAIGIMPPKGVLLHGPPGTGKTLLARACAKQTDAIFLKLAAPQLVQMFIGDGAKLVRDAFELAKEKCKDQDRGGAIIFIDELDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFTSNTKIKVIAATNRPDVLDPALLRSGRLDRKIELPHPTEEARARILQIHSRKMNVDTEDTNFDELARSTDDFNGAQLKAVCVEAGMLALRRESNVIKHEDFMEGI---------SLDNYDFEYFSLKR 877
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10758.625.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4Q9_ECTSI4.610e-28992.51AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CGA2_9STRA1.020e-26186.6426S protease regulatory subunit 6A-A n=1 Tax=Tribo... [more]
A0A6V1PEK8_HETAK2.460e-24881.65Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2UXQ0_9STRA7.570e-24581.19Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K3WL48_GLOUD3.880e-24482.87AAA domain-containing protein n=23 Tax=Oomycota Ta... [more]
A0A024UII9_9STRA1.050e-23481.0226S protease regulatory subunit 6A n=13 Tax=Saprol... [more]
F0YJM7_AURAN4.020e-23280.81AAA domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A7S0C264_9STRA1.140e-22878.87Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2UP47_9STRA3.590e-22774.73Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A0P1B831_PLAHL7.200e-22579.8226s protease regulatory subunit 6a n=1 Tax=Plasmop... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10758contigH-elongata_contig10758:496..7490 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score813.9
Seed ortholog evalue3.7e-233
Seed eggNOG ortholog2880.D7G4Q9
KEGG koko:K03065
KEGG Pathwayko03050,ko05169,map03050,map05169
KEGG ModuleM00341
GOsGO:0000166,GO:0000502,GO:0000731,GO:0002020,GO:0002082,GO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005783,GO:0005789,GO:0005811,GO:0005829,GO:0006139,GO:0006140,GO:0006163,GO:0006259,GO:0006281,GO:0006301,GO:0006302,GO:0006464,GO:0006486,GO:0006487,GO:0006508,GO:0006511,GO:0006515,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006888,GO:0006914,GO:0006919,GO:0006950,GO:0006974,GO:0007034,GO:0007041,GO:0008047,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008333,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009109,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009166,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0010562,GO:0010604,GO:0010646,GO:0010647,GO:0010918,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016032,GO:0016043,GO:0016192,GO:0016197,GO:0016236,GO:0016462,GO:0016504,GO:0016567,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0017144,GO:0018130,GO:0018193,GO:0018196,GO:0018279,GO:0019058,GO:0019079,GO:0019219,GO:0019220,GO:0019222,GO:0019362,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019674,GO:0019693,GO:0019899,GO:0019902,GO:0019903,GO:0019904,GO:0019941,GO:0019985,GO:0022411,GO:0022607,GO:0023051,GO:0023056,GO:0030111,GO:0030162,GO:0030163,GO:0030177,GO:0030234,GO:0030433,GO:0030554,GO:0030808,GO:0030810,GO:0030970,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031331,GO:0031334,GO:0031399,GO:0031401,GO:0031593,GO:0031625,GO:0031974,GO:0031981,GO:0031984,GO:0032268,GO:0032270,GO:0032434,GO:0032436,GO:0032446,GO:0032509,GO:0032510,GO:0032527,GO:0032553,GO:0032555,GO:0032559,GO:0032984,GO:0032991,GO:0033036,GO:0033554,GO:0034098,GO:0034214,GO:0034404,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034976,GO:0035639,GO:0035800,GO:0035861,GO:0035966,GO:0035967,GO:0036094,GO:0036211,GO:0036435,GO:0036503,GO:0036513,GO:0042175,GO:0042176,GO:0042221,GO:0042287,GO:0042288,GO:0042325,GO:0042327,GO:0042391,GO:0042726,GO:0042728,GO:0042802,GO:0042886,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043161,GO:0043167,GO:0043168,GO:0043170,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043280,GO:0043281,GO:0043412,GO:0043413,GO:0043457,GO:0043467,GO:0043531,GO:0043632,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044389,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045184,GO:0045732,GO:0045838,GO:0045862,GO:0045935,GO:0045937,GO:0045981,GO:0046034,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046907,GO:0048193,GO:0048471,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051186,GO:0051187,GO:0051234,GO:0051246,GO:0051247,GO:0051259,GO:0051260,GO:0051336,GO:0051345,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0051788,GO:0051881,GO:0052547,GO:0052548,GO:0055086,GO:0060255,GO:0060828,GO:0061134,GO:0061136,GO:0061857,GO:0061919,GO:0062012,GO:0062013,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070085,GO:0070647,GO:0070727,GO:0070841,GO:0070842,GO:0070887,GO:0071218,GO:0071310,GO:0071702,GO:0071704,GO:0071705,GO:0071712,GO:0071840,GO:0071897,GO:0071985,GO:0072387,GO:0072389,GO:0072521,GO:0072524,GO:0080090,GO:0090085,GO:0090263,GO:0090304,GO:0090734,GO:0097159,GO:0097352,GO:0097367,GO:0098772,GO:0098796,GO:0098827,GO:0140030,GO:1900371,GO:1900373,GO:1900542,GO:1900544,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901698,GO:1901800,GO:1902494,GO:1903003,GO:1903004,GO:1903006,GO:1903007,GO:1903050,GO:1903052,GO:1903320,GO:1903322,GO:1903362,GO:1903364,GO:1903513,GO:1903578,GO:1903580,GO:1903715,GO:1903862,GO:1904288,GO:1904949,GO:1905368,GO:1905369,GO:1990381,GO:1990730,GO:2000058,GO:2000060,GO:2000116,GO:2000152,GO:2000158,GO:2001056,GO:2001169,GO:2001171
EggNOG free text desc.Belongs to the AAA ATPase family
EggNOG OGsCOG1222@1,KOG0652@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03051
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAAA ATPase domain
Ec32 orthologEc-20_000710.1
Exons11
Model size2311
Cds size1362
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929605.6876884-UTR-H-elongata_contig10758:495..13351622929605.6876884-UTR-H-elongata_contig10758:495..1335Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10758 496..1335 -
1691679088.6260886-UTR-H-elongata_contig10758:495..13351691679088.6260886-UTR-H-elongata_contig10758:495..1335Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10758 496..1335 -
1622929605.868369-UTR-H-elongata_contig10758:7381..74901622929605.868369-UTR-H-elongata_contig10758:7381..7490Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10758 7382..7490 -
1691679088.7586305-UTR-H-elongata_contig10758:7381..74901691679088.7586305-UTR-H-elongata_contig10758:7381..7490Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10758 7382..7490 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929605.7025642-CDS-H-elongata_contig10758:1335..14131622929605.7025642-CDS-H-elongata_contig10758:1335..1413Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10758 1336..1413 -
1691679088.6364892-CDS-H-elongata_contig10758:1335..14131691679088.6364892-CDS-H-elongata_contig10758:1335..1413Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10758 1336..1413 -
1622929605.7182496-CDS-H-elongata_contig10758:1857..19701622929605.7182496-CDS-H-elongata_contig10758:1857..1970Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10758 1858..1970 -
1691679088.6443796-CDS-H-elongata_contig10758:1857..19701691679088.6443796-CDS-H-elongata_contig10758:1857..1970Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10758 1858..1970 -
1622929605.730776-CDS-H-elongata_contig10758:2221..23721622929605.730776-CDS-H-elongata_contig10758:2221..2372Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10758 2222..2372 -
1691679088.6525195-CDS-H-elongata_contig10758:2221..23721691679088.6525195-CDS-H-elongata_contig10758:2221..2372Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10758 2222..2372 -
1622929605.7482777-CDS-H-elongata_contig10758:2721..28681622929605.7482777-CDS-H-elongata_contig10758:2721..2868Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10758 2722..2868 -
1691679088.6614408-CDS-H-elongata_contig10758:2721..28681691679088.6614408-CDS-H-elongata_contig10758:2721..2868Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10758 2722..2868 -
1622929605.7611957-CDS-H-elongata_contig10758:3700..37781622929605.7611957-CDS-H-elongata_contig10758:3700..3778Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10758 3701..3778 -
1691679088.6712263-CDS-H-elongata_contig10758:3700..37781691679088.6712263-CDS-H-elongata_contig10758:3700..3778Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10758 3701..3778 -
1622929605.7740924-CDS-H-elongata_contig10758:4083..42891622929605.7740924-CDS-H-elongata_contig10758:4083..4289Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10758 4084..4289 -
1691679088.6838684-CDS-H-elongata_contig10758:4083..42891691679088.6838684-CDS-H-elongata_contig10758:4083..4289Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10758 4084..4289 -
1622929605.785774-CDS-H-elongata_contig10758:4529..47071622929605.785774-CDS-H-elongata_contig10758:4529..4707Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10758 4530..4707 -
1691679088.7016244-CDS-H-elongata_contig10758:4529..47071691679088.7016244-CDS-H-elongata_contig10758:4529..4707Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10758 4530..4707 -
1622929605.805897-CDS-H-elongata_contig10758:5090..51981622929605.805897-CDS-H-elongata_contig10758:5090..5198Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10758 5091..5198 -
1691679088.7154853-CDS-H-elongata_contig10758:5090..51981691679088.7154853-CDS-H-elongata_contig10758:5090..5198Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10758 5091..5198 -
1622929605.8203433-CDS-H-elongata_contig10758:5569..56471622929605.8203433-CDS-H-elongata_contig10758:5569..5647Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10758 5570..5647 -
1691679088.7285926-CDS-H-elongata_contig10758:5569..56471691679088.7285926-CDS-H-elongata_contig10758:5569..5647Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10758 5570..5647 -
1622929605.8359501-CDS-H-elongata_contig10758:5908..60101622929605.8359501-CDS-H-elongata_contig10758:5908..6010Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10758 5909..6010 -
1691679088.739079-CDS-H-elongata_contig10758:5908..60101691679088.739079-CDS-H-elongata_contig10758:5908..6010Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10758 5909..6010 -
1622929605.8532505-CDS-H-elongata_contig10758:7258..73811622929605.8532505-CDS-H-elongata_contig10758:7258..7381Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10758 7259..7381 -
1691679088.7510784-CDS-H-elongata_contig10758:7258..73811691679088.7510784-CDS-H-elongata_contig10758:7258..7381Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10758 7259..7381 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10758.625.1prot_H-elongata_contig10758.625.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig10758 1336..7381 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig10758.625.1

>prot_H-elongata_contig10758.625.1 ID=prot_H-elongata_contig10758.625.1|Name=mRNA_H-elongata_contig10758.625.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=454bp
MAEQQPPDVPSGDAARASTVDLESKEIWGDGADQLDEEILKMGTDELRQR
MRLLDNEIRIMRSDTDRIRHESATQRDKIKDNKEKIKLNKQLPWLVGNVV
EILDPEDDPDEEEDGGAQDIDATRQAKSAVMKTSTRQTIYLPVPGLVPTA
ELTPGDLVGTNKDSYLILEKLPAEYDNRVKAMEVDEKPTEEYSDIGGLDK
EIQELIEAVVLPMTHKHMFDNIGIRPPKGILLHGPPGTGKTLLARACAKQ
TDAIFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKCKDQSKGGAIIFIDE
LDAIGTKRFGGEQSGDREVQRTMLELLNQLDGFSSNEKIKVIAATNRPDV
LDPALLRSGRLDRKIELPHPSEEARGRILQIHSRKMNVDKGDVNFEELAR
SCEDFNGAQLKAVCVEAGMLALRREAEQIKHEDFMEGINVVSAKKKGSLD
YYA*
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mRNA from alignment at H-elongata_contig10758:496..7490-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig10758.625.1 ID=mRNA_H-elongata_contig10758.625.1|Name=mRNA_H-elongata_contig10758.625.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6995bp|location=Sequence derived from alignment at H-elongata_contig10758:496..7490- (Himanthalia elongata Himel1 dioecious)
AAGCCTGCTAAGGTAGGTTAACGTTCAGCTTTAATCAGCAAGAATTGGGA
CTGGGGTGAATCAAAAACATTACACAGAATCGTAGTTTGAGGAAATAAAA
AAGTAAGACATGGCAGAACAGCAACCGCCGGACGTACCATCAGGCGATGC
AGCGAGAGCTTCTACTGTCGACCTGGAATCGAAGGAGATCTGGGGCGATG
GGGCTGACCAACTCGATGAAGAGATATTGAAGGTACATAAGTATATGTGC
TTGATCGTATCGCTGTGTCTGCAGTCGCAAAGGATGTTTACTGTGATGTG
GACAATACTATCAACTTGTTTGGAAATGTAAGCCTCCAGAAAATACATTA
AACGACAAAATACAGCTCAACACCTACATTTACGGTGGAAGCGACGTCCA
GCGCGGAGGGGATTGTTGTATACGGCGCGCAACTGGGGTAGCACCCGGTG
GATATCGCTATTTCACCCCGCTCTTAAATATGTGCCTGAATACGGTGGTG
TAGAATTTGTGCCAAAAGTAAAATCTCATTTGCGTGGTTAGAGTCCATGC
TTTCTTGGAGGTAAAGCCGAGGTCATTTTATCTTTAAAAACATCTGAACT
CATTCCAACCCGCCGAACTGTCTTATCACGTGCGCTTGGTAACATATTCT
AAAAACCATATGAACTCAATAAAAAAAAACTCCGAACATCCACACCTTCA
TTACATCATTACACCACGAGTGGTAAAGTCAATCATCAAGGGGAGGGGAC
TAGGACCAACTATCATCGTCAGATTGGAGTATCTACATTACTATTTATTA
GGCTCTCAGCAGAGCTATTATATAATCTCTTTGCGATCACCGCTCATCTC
CCTGCGTTTACTGGATGAAGCAGTTCGACATCTGTAACTTTTGAGGGAAA
CCCCCCTCTAAATATTAAAATATATAACGTTGATGTATTTAAGCCATCAG
CGACGAATTGTTGCGCCTTGTGATGTCGACTGCTCCTGTCTTTAGGTTGG
ATCGCCACGACTATCGCTAGTGACTATGCCTATTAAAGTGCTATGACTAT
TGACACTTGTAAGCGATTTTAAAGAAGCGGTGCAATTATGGGGTGCGGGG
GCGGTAAGCTTCGATTCCGTAACCTTCGTCCCTTCCAATATAGGTGGCAG
GCGCTTTGACATGGATTGCTGTAGTTGGCAGCGGTCAGTTGTTACAGTTA
CACAAAACGTTGTCCCCTTCAGGGGAAGGAAGGAAGGTATCTATGGGTCG
ATATGGCGTCGCGTGTCCGACGGAGAAGTCAGTAACTATTTGTCATCGTT
TACAAGCTCGACAACGCAACTCGACATAGATAATAACGTTAACATAAAAA
AACGTACTCGTATTCTACATCCATAAGCTCTAGAGAATATCGAATATCAA
ATAAGTACAAGTAAAGGTACAGTAGAAGATACTATATACCGAAAGGTGCT
CGTTTTCACTCGCATGCTTCTGTGGCACAGATGGGAACCGATGAGCTGCG
GCAGCGCATGCGATTGCTGGACAACGAGATCCGCATCATGCGAAGTGACA
CTGACCGCATCCGCCACGAGAGCGCCACTCAGGTCGGAGCTACAGCGCAT
ACTATGACCCTTCGAAGCAACTTGCAGCGATGTACATTCGCCGCTCCACG
TTTCGAGCGTGAGGCTTGCTCTCCAGGCAGACGTCGTCGATCTTAATACT
GGTACTGCTACTTGACTTACCGTAGTTAACAAGTTGCAGTTGAAGTTTTG
CGGTGTTACGGCTTCGCTGCACGTAAACCTCTAATGACCCGTTATCGTGC
TTAACTTGCTTCTCGATGGTATTATGGTATGATCGTGCTCCAGCGGGATA
AAATTAAAGACAACAAGGAGAAGATCAAGCTCAACAAGCAGCTGCCTTGG
CTTGTGGGAAACGTCGTTGAGGTGAGATATGGCCCCACGGAGAGGTGAGG
AGAGGTTCGATGTGGGCCAGCGTAGAACGCAAAACTTGAGAGTGCGGCGG
TAACATCAACTGCGAAATAGACCACAAATAATATCCTCACCTTTTGTTCT
CATTGAAAGCGGAGGGATGCTTACCCATACTTTCCTTCGAGTCTTCTTAC
CCATACTTTCCTGGTAACGTGTTCCACATCGGCGCCGCCCCTCCCTGTTC
ACCAAGCAGGTCAACTACGCATTCTCGTAGCCTCGGAAGACTCTTAAGGT
TTCCCCTGCGCTGGGATTTCGTGATTTTAGTATTATACCCTCTCTCTCCC
CGCTTACCTATCTATATGTCTTATCTGTATTTGCGCCATAAGATCCTTGA
TCCGGAGGACGATCCGGACGAAGAGGAAGACGGAGGCGCACAGGACATCG
ATGCCACTCGGCAGGCGAAGAGCGCGGTCATGAAGACATCAACACGGCAG
GTAATGAAGAAATTGTAGCTCAAGATCTACTTCCACGAGAAGACGCCTCG
GGAAGTGTATAATTGTTGTGGGAAATTCTATCCGATCGCTAATGATTTTA
AATGTTCGGCAAACCGGTCGTGCCACAACCCAAAACAGCGGCGAGACTAA
TCCGTGGGCAAATACACTTTTGAAACTTCAATCGATAAAAGGCTTCATGT
CAGGAAGGCGCAAGCGAAAATCGCCACACGAGTTGGTGTGCACAAGCATC
TCAGTTGCGAAAATGGCAGCGCGCCCGGACGCCTGAAGTCGTCAGCGCCT
CACGGATCAGTGTCGTTAACAAACGATTCCTGCGGCTATCTCCTAACCGT
TGCACTACGGCTTGACCCTCTTTGTCTTGGCAGACGATCTACCTTCCAGT
CCCCGGACTCGTGCCGACCGCTGAGCTCACGCCAGGTGATCTCGTGGGAA
CGAACAAAGACAGCTACCTCATCCTCGAGAAGCTGCCGGCGGAGTACGAT
AATCGTGTGAAGGCGATGGAGGTGGACGAGAAGCCCACGGAGGAGTACAG
CGACATCGGCGGTGAGACGAGGCGAATGACTGAAATCTCATTTAATCTCG
TGACCAAAAGATCAGCGGCCGTAGTATTCTTTCTAAGTGTCAAGTAAAAA
AAAAAAGTAATATATACCCCGCGAATCCACAAGCGGCTATACGTTATCTC
CCACCCTGTCCTGTCCTCTCCTCCATTTATCTGCAACAAACGTGTTCCAT
GACCTGACGCAACATGAAGCTGCGTGCCGTGACGCGTGTGATCTACTTTA
GGCCTAGACAAGGAGATCCAGGAGCTGATCGAAGCGGTGGTTTTACCCAT
GACCCACAAGCATATGTTCGACAACATCGGCATCCGGCCCCCCAAGGGCA
TCCTTCTTCACGGACCTCCCGGCACGGGGAAGACTTTGCTTGCGCGGGCC
TGCGCGAAGCAAACGGACGCTATCTTCCTCAAGCTTGCCGGCCCCCAGCT
TGTACAGGTGATACCCGAGGACTTTTGTGTCACAAATAAGGATATGGGAG
GGCAGGATAGGACACACAAGGGAAGAATGTATGGGAGCCTGGGAGCGAAA
CGATGCTAACGAAATGCGATGTTGGAATCCCCATATGTTTGCTTGCGTTG
GATACGGCAGAGATTTGCACTTGCCCTTCTCTATTTAAGGCTTATTTATC
TCCTGAGTGGCTACTACTCAGACCCTCTTTTTGTTCTCTTTATAATACTT
ATTTAATTAATCTTGCCACCTCACATGCCTCGTCCATATTGCACCTCGAC
CTCGAATCGAAGATGTTCATCGGGGATGGCGCGAAGCTTGTTCGTGACGC
GTTCGAGCTAGCTAAGGAGAAATGCAAGGACCAGTCGAAGGTAAGATGGC
GGTGCTCTCTGGCTCTTAAAATCAATCAAGCAAATCATTCGGCTTATAGC
GCCAACTGCACCTAAAATTTGACAGATCGTCGTGCAACGACTCTGGCAAA
CACGTGTCTTGCGATGAGCTATGCAGGCCTCTCTCAGCAATTTTTCTGCA
AGATACCGATCGTGAAGTATAGTTTGATCAAAATGGAGAAATTACCGGTT
TCTTTGAACCACCTCTGATACTGTCTGTAACGGCATCTTACCTGTACAGT
CTACCAATAGTGGGTGTGGGAAAAGAGAGGCGCACAATAATTGGTCCATG
GGGTTATCTGAATAGGCTGCACCTGTTTCTCAAGCTACCTTGAGGATTGC
TGGCTCAGAGCCGGCGCACTATTGGTGGTGAACGCCATCGGTACGTAAGT
GCGCGAACTGATGAAATCGGAATTGGCCGATGGCGGTTGACGGAAGATAT
GGACACCGTGAAAACAAGAGTATCCCAGGAGTACGCACTATATTCAGCCT
GGGTTGAGCGAATAAGCGGACTGACGCCGGACGGGACGGCTGAACCCGTC
TCGCGAGACCAAATTCTCAGACGCGAACGGGGACAGGGTTTCCGTGTTCA
GCTGATCATAAGCAGGACGCAACGAAATCGTGTTTATCCACTCTGCTCTA
TACAGTTTATCCAATCAAATAAGAAAACCCGAACGAAGAGCGGTTTCGAT
GCCCAGTCTCAGCGTGTGGCCACACCCTCACAAACCGTTGTAATGTTGTG
ATGGACACCATGGGGGATTATGGCATTTGCCTTTGCTTGCGCGCTTTTCT
ATCCCGGCCTCGTTGGCGGCAGGGAGGAGCTATCATCTTTATCGACGAGC
TTGACGCAATCGGGACGAAGAGATTCGGGGGGGAGCAGTCTGGGGATAGG
GAAGTGCAACGAACGATGCTGGAGCTTCTCAACCAGCTGGACGGCTTCAG
CAGTAACGAGAAGATCAAGGTGAACAAGGACCGGCGTATCTATAACTTCA
GCGTAAAACCACGGACCCGGAGCAAACCCCAACGGCCTTTATATTATTCC
CGGAGAGAGCGGCATTGATCATTCTTTTTATTTAAAATACTTGTTGGGAG
TCGAAGAAAACGGCAAATACCATGCAAACGTTTGTTTTCAATTGCTAACG
TGATCCTAATCGTGGGTGCTGCCGGTCGAGCGACCTCGGGCCTCGGGAAA
AGAATGGCCGAGAAGCCGCCTGACGCTTCTACAGGCGTGGAATCACCATT
TTTACTCCTAATAAACTCAACAACTCTTTTCCAAAGACGTTCGTTTCCGT
CGGTGTTGGATAAAACAGGTAATCGCGGCGACGAACAGGCCGGACGTTTT
GGACCCCGCGCTGTTGCGATCCGGACGACTGGACCGTAAGATCGAGCTGC
CGCATCCATCCGAGGAAGCAAGGGGGCGCATCCTTCAGATCCACAGCCGC
AAGATGAACGTGGATAAGGGTGAGAGTTCATAACCCGGTACCCCTAATAT
TTTAGACTGTTTCATGCTCTTAACACAAGGGTATTTCGAGCGACTCGTAT
ATCCCCGATATTTAGGTTTCGTGTTAGGAACGGCTTTTTCGTTTTGATGT
CCCCGTCCCCCCTTTTTTTCGCCAGGATTGAAAAATACAACTACAGTACC
CTCATCTCCCCTTCGTAGACGTGGTGGTGAATTATCCCAATCAAACCCTC
CCGAATCCTTCAACACGTAGGTGACGTGAACTTTGAGGAGCTTGCCAGGT
CTTGCGAAGATTTCAACGGTGCCCAGCTCAAGGCGGTTTGCGTCGAAGCG
GGCATGCTTGCGCTTCGACGGGAGGCCGAGCAGGTACGCGTAACGTACGA
AGTTGTAGACTGAAAAGTAACCAGAGCTATCACAACGGGCGCCTAATCGC
AAAGGTGTTGAAATCACGAAGGGCAGCAAGGCGTATAACGCGCATATTGT
CTTTAGATAGATACGACGCGGGACTGGCGGGAACGGGCAGGTGGATATTA
CCAATCCAAGGGCAAAACATATTCTCCCCTATGAAGCGCTACCCCCGGAT
ATACGGTATGATACGGAAAGACGATTTCGACCCCCCCCCCCCCCCCCCCC
CCCCCCCCAACCCCCCCGCCAACACAATCTGTACCGCCCACTGCGGCCAA
NNNNNNNNNNCCCCCCCCTCCTCCCAAAACCTGGGACATTAATATTTGGA
TTGGTCAGATGGCGAGAACTTGATCTTCGGTTCCACGCCCCGTCCCTTTA
CGTTTTGGCATCTTTCCGCTTGACCAGATTAAGCACGAAGACTTCATGGA
GGGGATAAATGTGGTCTCTGCCAAGAAAAAGGGATCGCTAGACTACTACG
CATGATGCTTTTTTTTACTAAGTCGCTTGATTTAGATAACAAAAGAAAAA
GTCTAGAGGTAGGGGGGCGGTGGTTAAGAGGAAATGAAGATTAACTATAC
AGCCAATCATATCTGGGTGGGAGGAGGTCAATTGTCACTGCGATAGGTCG
TCGGCAAACCCTGCCTTTCCGAAGATTTTGTTCTAATTAAGAAATCCTGG
AAAAGGGTGCAGCAGGCGAGGATGAGAAGGACCACTTTTCAAATAAATTA
ACCGATATATTCTGGTGGATGTTTGTTTTTGAACGCGCACATATTTCAGG
CGGCCAAATTCATTTTATCTTTTCTCAGAAGAATCACCTCGCTCCTACTC
GTTGTTGCCTCGGTGCCGCGTTAGCTTTTATTACCCATACCGAATCATTT
CTTTTTTGGGGTCTCGCAGATACCATTCTAGCGAAAGCGCGCCTTTCCAA
TCGCAGCACTGTCATATTGACAGCGAGAAGCGATGCCGAGGCGCTAGAGC
GAACCGCCACTGACACAGCCAACATTAAAATGTAGGAGGGCGATCGAACT
TCACCTCTTGGCCTGTCCGTGGCTGTCGGGGAATATTCAAGATGCAGAAA
AGGCAGGGAGCGTATGTTGCTGAAATTTCATCTCACTCTGCTATTTGATA
AAATGTGTCTCTTAGCTGGGGTCACCAAATGTACAGTTGTTACATTCTCT
CATGTATGGCTTCAAAACGTCGCCCCAACTTTTTTTCAGACTAGAGAGGT
TTCTCTGCGAACATATTTCATGACGATTTCCCGATGTCAAAATGTATTAC
GAGCTATTGACTTTTGAGAACATGTGCTATAAGAGGTGCACCGCG
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Coding sequence (CDS) from alignment at H-elongata_contig10758:496..7490-

>mRNA_H-elongata_contig10758.625.1 ID=mRNA_H-elongata_contig10758.625.1|Name=mRNA_H-elongata_contig10758.625.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2724bp|location=Sequence derived from alignment at H-elongata_contig10758:496..7490- (Himanthalia elongata Himel1 dioecious)
ATGGCAGAACAGCAACCGCCGGACGTACCATCAGGCGATGCAGCGAGAGC
TTCTACTGTCGACCTGGAATCGAAGGAGATCTGGGGCGATGGGGCTGACC
AACTCGATGAAGAGATATTGAAGATGGCAGAACAGCAACCGCCGGACGTA
CCATCAGGCGATGCAGCGAGAGCTTCTACTGTCGACCTGGAATCGAAGGA
GATCTGGGGCGATGGGGCTGACCAACTCGATGAAGAGATATTGAAGATGG
GAACCGATGAGCTGCGGCAGCGCATGCGATTGCTGGACAACGAGATCCGC
ATCATGCGAAGTGACACTGACCGCATCCGCCACGAGAGCGCCACTCAGAT
GGGAACCGATGAGCTGCGGCAGCGCATGCGATTGCTGGACAACGAGATCC
GCATCATGCGAAGTGACACTGACCGCATCCGCCACGAGAGCGCCACTCAG
CGGGATAAAATTAAAGACAACAAGGAGAAGATCAAGCTCAACAAGCAGCT
GCCTTGGCTTGTGGGAAACGTCGTTGAGCGGGATAAAATTAAAGACAACA
AGGAGAAGATCAAGCTCAACAAGCAGCTGCCTTGGCTTGTGGGAAACGTC
GTTGAGATCCTTGATCCGGAGGACGATCCGGACGAAGAGGAAGACGGAGG
CGCACAGGACATCGATGCCACTCGGCAGGCGAAGAGCGCGGTCATGAAGA
CATCAACACGGCAGATCCTTGATCCGGAGGACGATCCGGACGAAGAGGAA
GACGGAGGCGCACAGGACATCGATGCCACTCGGCAGGCGAAGAGCGCGGT
CATGAAGACATCAACACGGCAGACGATCTACCTTCCAGTCCCCGGACTCG
TGCCGACCGCTGAGCTCACGCCAGGTGATCTCGTGGGAACGAACAAAGAC
AGCTACCTCATCCTCGAGAAGCTGCCGGCGGAGTACGATAATCGTGTGAA
GGCGATGGAGGTGGACGAGAAGCCCACGGAGGAGTACAGCGACATCGGCG
ACGATCTACCTTCCAGTCCCCGGACTCGTGCCGACCGCTGAGCTCACGCC
AGGTGATCTCGTGGGAACGAACAAAGACAGCTACCTCATCCTCGAGAAGC
TGCCGGCGGAGTACGATAATCGTGTGAAGGCGATGGAGGTGGACGAGAAG
CCCACGGAGGAGTACAGCGACATCGGCGGCCTAGACAAGGAGATCCAGGA
GCTGATCGAAGCGGTGGTTTTACCCATGACCCACAAGCATATGTTCGACA
ACATCGGCATCCGGCCCCCCAAGGGCATCCTTCTTCACGGACCTCCCGGC
ACGGGGAAGACTTTGCTTGCGCGGGCCTGCGCGAAGCAAACGGACGCTAT
CTTCCTCAAGCTTGCCGGCCCCCAGCTTGTACAGGCCTAGACAAGGAGAT
CCAGGAGCTGATCGAAGCGGTGGTTTTACCCATGACCCACAAGCATATGT
TCGACAACATCGGCATCCGGCCCCCCAAGGGCATCCTTCTTCACGGACCT
CCCGGCACGGGGAAGACTTTGCTTGCGCGGGCCTGCGCGAAGCAAACGGA
CGCTATCTTCCTCAAGCTTGCCGGCCCCCAGCTTGTACAGATGTTCATCG
GGGATGGCGCGAAGCTTGTTCGTGACGCGTTCGAGCTAGCTAAGGAGAAA
TGCAAGGACCAGTCGAAGATGTTCATCGGGGATGGCGCGAAGCTTGTTCG
TGACGCGTTCGAGCTAGCTAAGGAGAAATGCAAGGACCAGTCGAAGGGAG
GAGCTATCATCTTTATCGACGAGCTTGACGCAATCGGGACGAAGAGATTC
GGGGGGGAGCAGTCTGGGGATAGGGAAGTGCAACGAACGATGCTGGAGCT
TCTCAACCAGCTGGACGGCTTCAGCAGTAACGAGAAGATCAAGGGAGGAG
CTATCATCTTTATCGACGAGCTTGACGCAATCGGGACGAAGAGATTCGGG
GGGGAGCAGTCTGGGGATAGGGAAGTGCAACGAACGATGCTGGAGCTTCT
CAACCAGCTGGACGGCTTCAGCAGTAACGAGAAGATCAAGGTAATCGCGG
CGACGAACAGGCCGGACGTTTTGGACCCCGCGCTGTTGCGATCCGGACGA
CTGGACCGTAAGATCGAGCTGCCGCATCCATCCGAGGAAGCAAGGGGGCG
CATCCTTCAGATCCACAGCCGCAAGATGAACGTGGATAAGGGTAATCGCG
GCGACGAACAGGCCGGACGTTTTGGACCCCGCGCTGTTGCGATCCGGACG
ACTGGACCGTAAGATCGAGCTGCCGCATCCATCCGAGGAAGCAAGGGGGC
GCATCCTTCAGATCCACAGCCGCAAGATGAACGTGGATAAGGGTGACGTG
AACTTTGAGGAGCTTGCCAGGTCTTGCGAAGATTTCAACGGTGCCCAGCT
CAAGGCGGTTTGCGTCGAAGCGGGCATGCTTGCGCTTCGACGGGAGGCCG
AGCAGGTGACGTGAACTTTGAGGAGCTTGCCAGGTCTTGCGAAGATTTCA
ACGGTGCCCAGCTCAAGGCGGTTTGCGTCGAAGCGGGCATGCTTGCGCTT
CGACGGGAGGCCGAGCAGATTAAGCACGAAGACTTCATGGAGGGGATAAA
TGTGGTCTCTGCCAAGAAAAAGGGATCGCTAGACTACTACGCATGAATTA
AGCACGAAGACTTCATGGAGGGGATAAATGTGGTCTCTGCCAAGAAAAAG
GGATCGCTAGACTACTACGCATGA
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