prot_H-elongata_contig107324.604.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig107324.604.1
Unique Nameprot_H-elongata_contig107324.604.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length54
Homology
BLAST of mRNA_H-elongata_contig107324.604.1 vs. uniprot
Match: A0A5J4Y1M7_9CHLO (Eukaryotic translation initiation factor 2 subunit 3-like n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y1M7_9CHLO)

HSP 1 Score: 89.4 bits (220), Expect = 1.900e-20
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 0
Query:    7 QRLDTLEPSKLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQ 54
            Q L TL+PSKLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQ
Sbjct:   10 QNLKTLDPSKLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQ 57          
BLAST of mRNA_H-elongata_contig107324.604.1 vs. uniprot
Match: A0A7S2G0C5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G0C5_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 5.940e-20
Identity = 43/48 (89.58%), Postives = 46/48 (95.83%), Query Frame = 0
Query:    7 QRLDTLEPSKLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQ 54
            Q L+ L+P+KLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQ
Sbjct:   18 QDLENLDPAKLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQ 65          
BLAST of mRNA_H-elongata_contig107324.604.1 vs. uniprot
Match: A0A6U2E599_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2E599_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 7.490e-20
Identity = 41/51 (80.39%), Postives = 47/51 (92.16%), Query Frame = 0
Query:    4 ILPQRLDTLEPSKLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQ 54
            ++PQ   T++P+KLT LTPEVISRQATIN+GTIGHVAHGKSTVVKAISGVQ
Sbjct:   34 LMPQDAKTVDPAKLTALTPEVISRQATINVGTIGHVAHGKSTVVKAISGVQ 84          
BLAST of mRNA_H-elongata_contig107324.604.1 vs. uniprot
Match: A0A6P6Y6A6_DERPT (Protein-synthesizing GTPase n=5 Tax=Psoroptidia TaxID=223472 RepID=A0A6P6Y6A6_DERPT)

HSP 1 Score: 90.1 bits (222), Expect = 7.760e-20
Identity = 46/48 (95.83%), Postives = 46/48 (95.83%), Query Frame = 0
Query:    7 QRLDTLEPSKLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQ 54
            Q LDTLE SKLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQ
Sbjct:    8 QNLDTLETSKLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQ 55          
BLAST of mRNA_H-elongata_contig107324.604.1 vs. uniprot
Match: A0A5J4Y2U5_9CHLO (Protein-synthesizing GTPase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y2U5_9CHLO)

HSP 1 Score: 89.4 bits (220), Expect = 1.500e-19
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 0
Query:    7 QRLDTLEPSKLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQ 54
            Q L TL+PSKLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQ
Sbjct:   10 QNLKTLDPSKLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQ 57          
BLAST of mRNA_H-elongata_contig107324.604.1 vs. uniprot
Match: UPI000719BF2A (eukaryotic translation initiation factor 2 subunit 3-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719BF2A)

HSP 1 Score: 82.0 bits (201), Expect = 3.300e-19
Identity = 42/48 (87.50%), Postives = 44/48 (91.67%), Query Frame = 0
Query:    7 QRLDTLEPSKLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQ 54
            Q L TL+  +LTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQ
Sbjct:   20 QDLSTLDIKELTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQ 67          
BLAST of mRNA_H-elongata_contig107324.604.1 vs. uniprot
Match: A0A1A9X442_9MUSC (Uncharacterized protein n=1 Tax=Glossina brevipalpis TaxID=37001 RepID=A0A1A9X442_9MUSC)

HSP 1 Score: 81.3 bits (199), Expect = 5.520e-19
Identity = 42/48 (87.50%), Postives = 43/48 (89.58%), Query Frame = 0
Query:    7 QRLDTLEPSKLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQ 54
            Q L  LE S LTPL+PEVISRQATINIGTIGHVAHGKSTVVKAISGVQ
Sbjct:   17 QDLSNLEVSNLTPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQ 64          
BLAST of mRNA_H-elongata_contig107324.604.1 vs. uniprot
Match: A0A835YYS7_9STRA (Protein-synthesizing GTPase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYS7_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 5.720e-19
Identity = 44/48 (91.67%), Postives = 46/48 (95.83%), Query Frame = 0
Query:    7 QRLDTLEPSKLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQ 54
            Q L TL+P+KLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQ
Sbjct:   46 QDLSTLDPAKLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQ 93          
BLAST of mRNA_H-elongata_contig107324.604.1 vs. uniprot
Match: A0A0D2KP87_9CHLO (Eukaryotic translation initiation factor 2 subunit 3 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2KP87_9CHLO)

HSP 1 Score: 82.4 bits (202), Expect = 6.710e-19
Identity = 41/48 (85.42%), Postives = 45/48 (93.75%), Query Frame = 0
Query:    7 QRLDTLEPSKLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQ 54
            Q L TL+P+ LTPL+PEVISRQATINIGTIGHVAHGKSTVVKAI+GVQ
Sbjct:   10 QDLKTLDPAALTPLSPEVISRQATINIGTIGHVAHGKSTVVKAITGVQ 57          
BLAST of mRNA_H-elongata_contig107324.604.1 vs. uniprot
Match: A0A1S3D8E8_DIACI (eukaryotic translation initiation factor 2 subunit 3-like n=1 Tax=Diaphorina citri TaxID=121845 RepID=A0A1S3D8E8_DIACI)

HSP 1 Score: 84.0 bits (206), Expect = 9.330e-19
Identity = 43/48 (89.58%), Postives = 45/48 (93.75%), Query Frame = 0
Query:    7 QRLDTLEPSKLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQ 54
            Q L TL+ +KLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQ
Sbjct:   22 QDLSTLDITKLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQ 69          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig107324.604.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5J4Y1M7_9CHLO1.900e-2093.75Eukaryotic translation initiation factor 2 subunit... [more]
A0A7S2G0C5_9STRA5.940e-2089.58Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A6U2E599_9STRA7.490e-2080.39Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A6P6Y6A6_DERPT7.760e-2095.83Protein-synthesizing GTPase n=5 Tax=Psoroptidia Ta... [more]
A0A5J4Y2U5_9CHLO1.500e-1993.75Protein-synthesizing GTPase n=1 Tax=Trebouxia sp. ... [more]
UPI000719BF2A3.300e-1987.50eukaryotic translation initiation factor 2 subunit... [more]
A0A1A9X442_9MUSC5.520e-1987.50Uncharacterized protein n=1 Tax=Glossina brevipalp... [more]
A0A835YYS7_9STRA5.720e-1991.67Protein-synthesizing GTPase n=2 Tax=Tribonema minu... [more]
A0A0D2KP87_9CHLO6.710e-1985.42Eukaryotic translation initiation factor 2 subunit... [more]
A0A1S3D8E8_DIACI9.330e-1989.58eukaryotic translation initiation factor 2 subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 23..54
e-value: 2.1E-6
score: 29.4
NoneNo IPR availablePANTHERPTHR42854FAMILY NOT NAMEDcoord: 7..53
NoneNo IPR availablePANTHERPTHR42854:SF7EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3-RELATEDcoord: 7..53
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 22..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig107324contigH-elongata_contig107324:210..371 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig107324.604.1mRNA_H-elongata_contig107324.604.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig107324 210..371 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig107324.604.1 ID=prot_H-elongata_contig107324.604.1|Name=mRNA_H-elongata_contig107324.604.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=54bp
MYFILPQRLDTLEPSKLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAI
SGVQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase