prot_H-elongata_contig107306.603.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig107306.603.1
Unique Nameprot_H-elongata_contig107306.603.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length116
Homology
BLAST of mRNA_H-elongata_contig107306.603.1 vs. uniprot
Match: A0A6H5JZ77_9PHAE (Glyco_hydro_114 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZ77_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 6.190e-25
Identity = 47/88 (53.41%), Postives = 64/88 (72.73%), Query Frame = 0
Query:   27 DYAQSTIDTLHDNGKCVMCYISIGSWEEWREDKDDFPEAALGKPLSSPWQDELWLDITNEDLKAIMVARVQKTASMNCDAIEPDNMDV 114
            D  Q  ID LHD GK V+CYISIG+ E+WR+D  +FP +A+G  +S  W  E W+D+ ++D++ IM ARV+  +SMNCDA+EPDNM V
Sbjct:  173 DAGQGVIDELHDKGKGVVCYISIGTVEDWRDDAKEFPSSAIGGDVSG-WAGEKWVDVNDQDVREIMTARVEMASSMNCDAVEPDNMMV 259          
BLAST of mRNA_H-elongata_contig107306.603.1 vs. uniprot
Match: A0A1X0HF01_9MYCO (Endo alpha-1,4 polygalactosaminidase n=2 Tax=Mycolicibacterium moriokaense TaxID=39691 RepID=A0A1X0HF01_9MYCO)

HSP 1 Score: 100 bits (250), Expect = 1.420e-23
Identity = 44/79 (55.70%), Postives = 55/79 (69.62%), Query Frame = 0
Query:   35 TLHDNGKCVMCYISIGSWEEWREDKDDFPEAALGKPLSSPWQDELWLDITNEDLKAIMVARVQKTASMNCDAIEPDNMD 113
            TL  NG+ V+CY S GSWEE+R D  DFP  A G PL +P+QDELWLDI N D++ +M  R+   A   CDA+EPDN+D
Sbjct:   85 TLKANGRKVICYFSAGSWEEFRPDAADFPAVANGNPLDAPFQDELWLDIRNADVRTLMQRRLDVAAERGCDAVEPDNVD 163          
BLAST of mRNA_H-elongata_contig107306.603.1 vs. uniprot
Match: D7FW90_ECTSI (Glyco_hydro_114 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW90_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 1.910e-23
Identity = 41/88 (46.59%), Postives = 56/88 (63.64%), Query Frame = 0
Query:   27 DYAQSTIDTLHDNGKCVMCYISIGSWEEWREDKDDFPEAALGKPLSSPWQDELWLDITNEDLKAIMVARVQKTASMNCDAIEPDNMDV 114
            D   S  D +   G  V+CY S G+ E+WRED DDFPE  LG PL+  W  E+W+D+ NE+++A+M AR+ K     CD +EPDN+ V
Sbjct:    8 DVDTSVFDEIKAQGSVVICYFSAGTREDWREDADDFPEEGLGAPLAD-WDGEVWVDVNNEEVRAVMAARLDKAVEKGCDGVEPDNVQV 94          
BLAST of mRNA_H-elongata_contig107306.603.1 vs. uniprot
Match: A0A6H5L4R5_9PHAE (Glyco_hydro_114 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4R5_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 3.330e-23
Identity = 40/85 (47.06%), Postives = 55/85 (64.71%), Query Frame = 0
Query:   31 STIDTLHDNGKCVMCYISIGSWEEWREDKDDFPEAALGKPLSSPWQDELWLDITNEDLKAIMVARVQKTASMNCDAIEPDNMDVS 115
            S  D +   G  V+CY S G+ E+WRED DDFPE  LGKPL+  W  E+W+D+ NE+++A+M AR+       CD +EPDN+  S
Sbjct:   62 SVFDEIKAQGSVVICYFSAGTREDWREDADDFPEEGLGKPLAD-WDGEVWVDVNNEEVRAVMAARLDTAVEKGCDGVEPDNVQAS 145          
BLAST of mRNA_H-elongata_contig107306.603.1 vs. uniprot
Match: D7FRL2_ECTSI (Endo alpha-1,4 polygalactosaminidase precusor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRL2_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 5.690e-23
Identity = 54/112 (48.21%), Postives = 71/112 (63.39%), Query Frame = 0
Query:   10 VTDSNSFSIHTPCD---------FESDYAQSTIDTLHDNGKCVMCYISIGSWEEWREDKDDFPEAALGKPLSSPWQDELWLDITNEDLKAIMVARVQKTASMNCDAIEPDNM 112
            V D+ +++++TP D          + D AQ TID LH  GK V CYIS+G+ E WRED   FP +A+G      WQ E +LDIT + ++ +M ARV+K A MNCDAIEPDNM
Sbjct:  824 VGDTWNYNLNTPVDTXXXXXVFFIDMDNAQDTIDELHGKGKYVSCYISVGTVESWREDAGAFPSSAVGNSWDD-WQGENFLDITQQSVRDLMEARVEKAARMNCDAIEPDNM 934          
BLAST of mRNA_H-elongata_contig107306.603.1 vs. uniprot
Match: A0A1I4UB85_9PROT (Glyco_hydro_114 domain-containing protein n=1 Tax=Nitrosomonas communis TaxID=44574 RepID=A0A1I4UB85_9PROT)

HSP 1 Score: 98.6 bits (244), Expect = 7.380e-23
Identity = 45/87 (51.72%), Postives = 56/87 (64.37%), Query Frame = 0
Query:   27 DYAQSTIDTLHDNGKCVMCYISIGSWEEWREDKDDFPEAALGKPLSSPWQDELWLDITNEDLKAIMVARVQKTASMNCDAIEPDNMD 113
            D  QS ID LH  G  V+CY S GSWE WRED D FPE  LG+   + W  E WLDI + ++++IM AR+    S  CDA+EPDN+D
Sbjct:   56 DSPQSLIDDLHAKGIAVVCYFSAGSWENWREDADQFPENVLGR--KNGWAGERWLDIRSNEVRSIMAARIGLARSKGCDAVEPDNVD 140          
BLAST of mRNA_H-elongata_contig107306.603.1 vs. uniprot
Match: UPI001E559D5E (endo alpha-1,4 polygalactosaminidase n=1 Tax=Saccharospirillum mangrovi TaxID=2161747 RepID=UPI001E559D5E)

HSP 1 Score: 97.4 bits (241), Expect = 2.330e-22
Identity = 51/113 (45.13%), Postives = 71/113 (62.83%), Query Frame = 0
Query:    1 KLLSSSAATVTDSNSFSIHTPCDFESDYAQSTIDTLHDNGKCVMCYISIGSWEEWREDKDDFPEAALGKPLSSPWQDELWLDITNEDLKAIMVARVQKTASMNCDAIEPDNMD 113
            +LL +  AT+  S +  I+    F++D  Q TID LHD+ + V+CY S GS+E WR+D+D+F    LGK L   W+DE WLDI + ++  IM AR+   A   CD +EPDNMD
Sbjct:   27 QLLVNDGATLNTSYNVEIYDVDLFDTD--QETIDELHDDNRFVICYFSAGSYENWRDDEDEFAGNELGKTLDG-WEDERWLDIRSTNVHRIMKARLDLAADKECDGVEPDNMD 136          
BLAST of mRNA_H-elongata_contig107306.603.1 vs. uniprot
Match: A0A317C8M1_9GAMM (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Leucothrix arctica TaxID=1481894 RepID=A0A317C8M1_9GAMM)

HSP 1 Score: 97.4 bits (241), Expect = 2.600e-22
Identity = 44/87 (50.57%), Postives = 58/87 (66.67%), Query Frame = 0
Query:   27 DYAQSTIDTLHDNGKCVMCYISIGSWEEWREDKDDFPEAALGKPLSSPWQDELWLDITNEDLKAIMVARVQKTASMNCDAIEPDNMD 113
            D  +S I+TLH NGK V+CY S GS+E WR+D   F +AALG  L   W+DE WLD+ ++ LK IM AR+      +CD +EPDN+D
Sbjct:   65 DSPKSLINTLHGNGKKVICYFSAGSYENWRDDAQQFDKAALGSILDG-WEDEQWLDVRSDSLKPIMTARLDLAKQKDCDGVEPDNVD 150          
BLAST of mRNA_H-elongata_contig107306.603.1 vs. uniprot
Match: A0A0F7FWD9_9ACTN (Endo alpha-1,4 polygalactosaminidase n=2 Tax=Streptomyces TaxID=1883 RepID=A0A0F7FWD9_9ACTN)

HSP 1 Score: 97.4 bits (241), Expect = 3.050e-22
Identity = 43/88 (48.86%), Postives = 58/88 (65.91%), Query Frame = 0
Query:   27 DYAQSTIDTLHDNGKCVMCYISIGSWEEWREDKDDFPEAALGKPLSSPWQDELWLDITNED-LKAIMVARVQKTASMNCDAIEPDNMD 113
            D + + +DTLH  G+ V+CYIS+GSWE+WR D  DFP++ +G PL   W+ E WLD+   D L+ +M AR    A    DA+EPDNMD
Sbjct:   82 DNSAAVVDTLHSEGRKVICYISVGSWEDWRPDAGDFPDSVIGNPLDE-WEGEQWLDVRQLDTLRPLMAARFDMCADKGFDAVEPDNMD 168          
BLAST of mRNA_H-elongata_contig107306.603.1 vs. uniprot
Match: A0A8K0WUY1_9HYPO (Glycoside hydrolase superfamily n=1 Tax=Stachybotrys elegans TaxID=80388 RepID=A0A8K0WUY1_9HYPO)

HSP 1 Score: 97.8 bits (242), Expect = 3.330e-22
Identity = 45/87 (51.72%), Postives = 57/87 (65.52%), Query Frame = 0
Query:   27 DYAQSTIDTLHDNGKCVMCYISIGSWEEWREDKDDFPEAALGKPLSSPWQDELWLDITNEDLKAIMVARVQKTASMNCDAIEPDNMD 113
            D  Q T   L   GK V+CY S GSWE+WR+DKDDF +  LGK L   W DE WLD+T+ +++ IM  R+Q  A   CDAI+PDN+D
Sbjct:   88 DNDQETFAMLQAAGKKVICYFSAGSWEDWRDDKDDFNDEDLGKELDG-WPDERWLDLTSTNVRNIMTRRIQVAADKGCDAIDPDNVD 173          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig107306.603.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZ77_9PHAE6.190e-2553.41Glyco_hydro_114 domain-containing protein n=2 Tax=... [more]
A0A1X0HF01_9MYCO1.420e-2355.70Endo alpha-1,4 polygalactosaminidase n=2 Tax=Mycol... [more]
D7FW90_ECTSI1.910e-2346.59Glyco_hydro_114 domain-containing protein n=1 Tax=... [more]
A0A6H5L4R5_9PHAE3.330e-2347.06Glyco_hydro_114 domain-containing protein n=1 Tax=... [more]
D7FRL2_ECTSI5.690e-2348.21Endo alpha-1,4 polygalactosaminidase precusor n=1 ... [more]
A0A1I4UB85_9PROT7.380e-2351.72Glyco_hydro_114 domain-containing protein n=1 Tax=... [more]
UPI001E559D5E2.330e-2245.13endo alpha-1,4 polygalactosaminidase n=1 Tax=Sacch... [more]
A0A317C8M1_9GAMM2.600e-2250.57Endo alpha-1,4 polygalactosaminidase n=1 Tax=Leuco... [more]
A0A0F7FWD9_9ACTN3.050e-2248.86Endo alpha-1,4 polygalactosaminidase n=2 Tax=Strep... [more]
A0A8K0WUY1_9HYPO3.330e-2251.72Glycoside hydrolase superfamily n=1 Tax=Stachybotr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 10..115
e-value: 5.4E-8
score: 34.0
IPR004352Glycoside-hydrolase family GH114, TIM-barrel domainPFAMPF03537Glyco_hydro_114coord: 22..114
e-value: 2.3E-30
score: 105.6
NoneNo IPR availablePANTHERPTHR35273FAMILY NOT NAMEDcoord: 28..113
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 27..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig107306contigH-elongata_contig107306:1288..2071 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig107306.603.1mRNA_H-elongata_contig107306.603.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig107306 1288..2071 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig107306.603.1 ID=prot_H-elongata_contig107306.603.1|Name=mRNA_H-elongata_contig107306.603.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=116bp
KLLSSSAATVTDSNSFSIHTPCDFESDYAQSTIDTLHDNGKCVMCYISIG
SWEEWREDKDDFPEAALGKPLSSPWQDELWLDITNEDLKAIMVARVQKTA
SMNCDAIEPDNMDVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM
IPR004352GH114_TIM-barrel
IPR017853Glycoside_hydrolase_SF