prot_H-elongata_contig10730.602.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10730.602.1
Unique Nameprot_H-elongata_contig10730.602.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length132
Homology
BLAST of mRNA_H-elongata_contig10730.602.1 vs. uniprot
Match: D7FV68_ECTSI (Probable chromatin remodelling complex ATPase chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV68_ECTSI)

HSP 1 Score: 218 bits (556), Expect = 2.220e-63
Identity = 108/131 (82.44%), Postives = 113/131 (86.26%), Query Frame = 0
Query:    1 VLPEALLSEKRRLLEEGFADWSKAQYMIFVRASAKYGRGAYDRIAAEVGKAEKDVELYAKAFWEXXXXXXXXXXXXRHVKNVEKGERKIEEINRLMGATNSFISKFSNPWEQLSFHYTGTQGKIFNANEDR 131
            VLPE LLSEK RLL EGFADWSKAQYMIFVRASAK+GRGAYDRIAAEVGKAEKDVE YAKAFWE            RHVKNVEKGERKIEEINRLMGAT SFISKF+NPWEQL+F YTGTQGK+FNA+EDR
Sbjct:  906 VLPEPLLSEKVRLLSEGFADWSKAQYMIFVRASAKHGRGAYDRIAAEVGKAEKDVERYAKAFWEKGSTAFAPADWERHVKNVEKGERKIEEINRLMGATRSFISKFANPWEQLTFQYTGTQGKVFNAHEDR 1036          
BLAST of mRNA_H-elongata_contig10730.602.1 vs. uniprot
Match: A0A835YGX5_9STRA (Putative chromatin remodelling complex ATPase chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGX5_9STRA)

HSP 1 Score: 152 bits (383), Expect = 4.430e-40
Identity = 73/132 (55.30%), Postives = 92/132 (69.70%), Query Frame = 0
Query:    1 VLPEALLSEKRRLLEEGFADWSKAQYMIFVRASAKYGRGAYDRIAAEVGKAEKDVELYAKAFWEXXXXXXXXXXXXRHVKNVEKGERKIEEINRLMGATNSFISKFSNPWEQLSFHYTGT-QGKIFNANEDR 131
            +LP  L +EK  LL +GF+DW+K  Y +FVRASAKYGR   D+IA EVGK E +V  YA AFW             RH++NVE+GE+KIEEI+RLM AT +F+++F NPWEQL+F Y    QGK+FNA EDR
Sbjct:  938 LLPPDLAAEKAALLAQGFSDWTKPHYQLFVRASAKYGRRHVDKIALEVGKTEAEVARYAAAFWALGATALAPAEWERHLRNVERGEKKIEEISRLMDATRAFVARFRNPWEQLAFQYANAAQGKVFNAPEDR 1069          
BLAST of mRNA_H-elongata_contig10730.602.1 vs. uniprot
Match: W7TTV2_9STRA (Putative chromatin remodelling complex atpase chain n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTV2_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.090e-35
Identity = 66/133 (49.62%), Postives = 87/133 (65.41%), Query Frame = 0
Query:    1 VLPEALLSEKRRLLEEGFADWSKAQYMIFVRASAKYGRGAYDRIAAEVGKAEKDVELYAKAFWEXXXXXXXXXXXXRHVKNVEKGERKIEEINRLMGATNSFISKFSNPWEQLSFHYTGTQGK--IFNANEDR 131
            +L   L  EK RLL EGF DWS+  + +F RASAKYGR +Y++IA E+GK E++V+ YA+ FW             + V  +EKGE+K+EEI RL  AT   +S+F NPWE+LSFHY G QGK  I++  EDR
Sbjct:  144 LLTPVLAEEKARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFWRKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDR 276          
BLAST of mRNA_H-elongata_contig10730.602.1 vs. uniprot
Match: K8YUK2_NANGC (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YUK2_NANGC)

HSP 1 Score: 139 bits (350), Expect = 1.220e-35
Identity = 66/133 (49.62%), Postives = 87/133 (65.41%), Query Frame = 0
Query:    1 VLPEALLSEKRRLLEEGFADWSKAQYMIFVRASAKYGRGAYDRIAAEVGKAEKDVELYAKAFWEXXXXXXXXXXXXRHVKNVEKGERKIEEINRLMGATNSFISKFSNPWEQLSFHYTGTQGK--IFNANEDR 131
            +L   L  EK RLL EGF DWS+  + +F RASAKYGR +Y++IA E+GK E++V+ YA+ FW             + V  +EKGE+K+EEI RL  AT   +S+F NPWE+LSFHY G QGK  I++  EDR
Sbjct:  933 LLTPVLAEEKARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFWRKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDR 1065          
BLAST of mRNA_H-elongata_contig10730.602.1 vs. uniprot
Match: A0A4D9CV79_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CV79_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.240e-35
Identity = 66/133 (49.62%), Postives = 87/133 (65.41%), Query Frame = 0
Query:    1 VLPEALLSEKRRLLEEGFADWSKAQYMIFVRASAKYGRGAYDRIAAEVGKAEKDVELYAKAFWEXXXXXXXXXXXXRHVKNVEKGERKIEEINRLMGATNSFISKFSNPWEQLSFHYTGTQGK--IFNANEDR 131
            +L   L  EK RLL EGF DWS+  + +F RASAKYGR +Y++IA E+GK E++V+ YA+ FW             + V  +EKGE+K+EEI RL  AT   +S+F NPWE+LSFHY G QGK  I++  EDR
Sbjct:  915 LLTPVLAGEKARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFWRKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDR 1047          
BLAST of mRNA_H-elongata_contig10730.602.1 vs. uniprot
Match: A0A4Q3BVT5_9BACT (SANT domain-containing protein n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q3BVT5_9BACT)

HSP 1 Score: 131 bits (330), Expect = 1.580e-34
Identity = 63/131 (48.09%), Postives = 85/131 (64.89%), Query Frame = 0
Query:    1 VLPEALLSEKRRLLEEGFADWSKAQYMIFVRASAKYGRGAYDRIAAEVGKAEKDVELYAKAFWEXXXXXXXXXXXXRHVKNVEKGERKIEEINRLMGATNSFISKFSNPWEQLSFHYTGTQGKIFNANEDR 131
            +LP AL  EK RLL EGFADW++ Q+  FV+ASAK+GRG  ++IA ++G+   +V  YA+AFWE            R  K +EKGE+++EEI+RL  AT   I  F +PWE+LSF   G  G+IF + EDR
Sbjct:  212 LLPPALQEEKTRLLAEGFADWTRVQFGHFVKASAKHGRGEVEKIAKDMGRPLDEVGRYARAFWERGPRDLPPSEWERVTKQIEKGEKRLEEISRLTAATGRLIGMFEDPWEELSFRNVGNTGRIFTSVEDR 342          
BLAST of mRNA_H-elongata_contig10730.602.1 vs. uniprot
Match: A0A7S3UXY0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXY0_HETAK)

HSP 1 Score: 124 bits (311), Expect = 6.810e-33
Identity = 59/131 (45.04%), Postives = 81/131 (61.83%), Query Frame = 0
Query:    1 VLPEALLSEKRRLLEEGFADWSKAQYMIFVRASAKYGRGAYDRIAAEVGKAEKDVELYAKAFWEXXXXXXXXXXXXRHVKNVEKGERKIEEINRLMGATNSFISKFSNPWEQLSFHYTGTQGKIFNANEDR 131
            +L + L  EK  LL EGF  W +  Y  F RASA++GR A+ +IA EV K  ++V  YA AFW+            R  KN+EKGER+I+E+ RLM A    ++KF +PWE L+F Y G QG+++N +EDR
Sbjct:   19 LLDDDLHREKVALLAEGFPGWLRQHYSTFCRASARHGRDAFAQIAQEVEKPVEEVAAYAAAFWKKGPSVIDPKEWDRVTKNIEKGERRIQEVGRLMAAARRLLAKFRDPWEDLTFQYVGQQGRVYNIHEDR 149          
BLAST of mRNA_H-elongata_contig10730.602.1 vs. uniprot
Match: A0A7S3HIT7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HIT7_9STRA)

HSP 1 Score: 128 bits (322), Expect = 7.220e-32
Identity = 60/131 (45.80%), Postives = 84/131 (64.12%), Query Frame = 0
Query:    1 VLPEALLSEKRRLLEEGFADWSKAQYMIFVRASAKYGRGAYDRIAAEVGKAEKDVELYAKAFWEXXXXXXXXXXXXRHVKNVEKGERKIEEINRLMGATNSFISKFSNPWEQLSFHYTGTQGKIFNANEDR 131
            VLP  L  EK +L+  GF DW+K  +  FVRASAK+GR  +++IA +VG+  ++ + Y++AFWE            R  K +EKGE+++EEI RL  AT   I+ F +PWE+L+F   G QG+IFNA EDR
Sbjct:  607 VLPPELHEEKTQLVAAGFGDWTKVHFNNFVRASAKHGRSEFEKIAKDVGRPVEETKRYSQAFWERGAAELPAADWERITKQIEKGEKRLEEIGRLTSATAKLITMFEDPWEELTFRNVGNQGRIFNAVEDR 737          
BLAST of mRNA_H-elongata_contig10730.602.1 vs. uniprot
Match: A0A7S1U7T9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7T9_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.990e-31
Identity = 58/120 (48.33%), Postives = 78/120 (65.00%), Query Frame = 0
Query:    1 VLPEALLSEKRRLLEEGFADWSKAQYMIFVRASAKYGRGAYDRIAAEVGKAEKDVELYAKAFWEXXXXXXXXXXXXRHVKNVEKGERKIEEINRLMGATNSFISKFSNPWEQLSFHYTGT 120
            VLPE  ++EK+ LL +GF DW++ Q+  F RASAKYGR A+ +IA E  + E +V  YA AFW             + VKN+EKGERK+EEI+RL  +T  FI  F++PWE L+F Y G+
Sbjct:   77 VLPEDEVAEKKALLAQGFGDWTRGQFSSFHRASAKYGRDAFAKIATECNRLEAEVSAYAAAFWSRGPSTFSAAEWDKIVKNIEKGERKLEEISRLTDSTRKFIGCFADPWEDLTFKYAGS 196          
BLAST of mRNA_H-elongata_contig10730.602.1 vs. uniprot
Match: B8C4D6_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4D6_THAPS)

HSP 1 Score: 114 bits (285), Expect = 6.920e-27
Identity = 60/125 (48.00%), Postives = 75/125 (60.00%), Query Frame = 0
Query:    9 EKRRLLEEGFADWSKAQYMIFVRASAKYGRGAYDRIAAEVGKAEKDVELYAKAFW--EXXXXXXXXXXXXRHVKNVEKGERKIEEINRLMGATNSFISKFSNPWEQLSFHYTGTQGKIFNANEDR 131
            EK RLL EGFADWS+  Y  FV+ASAKYGR  Y +IA +VGK    V+ YA+AFW  E            R VK +EKGE++IE++  L   T   IS F NPW +L F +   + K F A+EDR
Sbjct:  812 EKARLLAEGFADWSRHHYSSFVKASAKYGRTNYAKIAIDVGKPVSAVKTYAEAFWNEEFGKKRFSEHEHDRVVKLIEKGEKRIEDVKGLQRGTKILISLFENPWVELQFTHVNCKDKKFTADEDR 936          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10730.602.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV68_ECTSI2.220e-6382.44Probable chromatin remodelling complex ATPase chai... [more]
A0A835YGX5_9STRA4.430e-4055.30Putative chromatin remodelling complex ATPase chai... [more]
W7TTV2_9STRA1.090e-3549.62Putative chromatin remodelling complex atpase chai... [more]
K8YUK2_NANGC1.220e-3549.62Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A4D9CV79_9STRA1.240e-3549.62Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A4Q3BVT5_9BACT1.580e-3448.09SANT domain-containing protein n=1 Tax=Verrucomicr... [more]
A0A7S3UXY0_HETAK6.810e-3345.04Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3HIT7_9STRA7.220e-3245.80Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S1U7T9_9STRA1.990e-3148.33Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
B8C4D6_THAPS6.920e-2748.00Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.60coord: 18..100
e-value: 8.5E-22
score: 79.3
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 2..131
NoneNo IPR availablePANTHERPTHR10799:SF979coord: 2..131
IPR015195SLIDE domainPFAMPF09111SLIDEcoord: 76..131
e-value: 1.3E-11
score: 44.5
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 20..66
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 74..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10730contigH-elongata_contig10730:4969..8531 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10730.602.1mRNA_H-elongata_contig10730.602.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10730 4969..8531 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10730.602.1 ID=prot_H-elongata_contig10730.602.1|Name=mRNA_H-elongata_contig10730.602.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=132bp
VLPEALLSEKRRLLEEGFADWSKAQYMIFVRASAKYGRGAYDRIAAEVGK
AEKDVELYAKAFWEKGAEAFAAADWERHVKNVEKGERKIEEINRLMGATN
SFISKFSNPWEQLSFHYTGTQGKIFNANEDR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015195SLIDE
IPR009057Homeobox-like_sf