prot_H-elongata_contig10730.601.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10730.601.1
Unique Nameprot_H-elongata_contig10730.601.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length227
Homology
BLAST of mRNA_H-elongata_contig10730.601.1 vs. uniprot
Match: D7FV68_ECTSI (Probable chromatin remodelling complex ATPase chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV68_ECTSI)

HSP 1 Score: 350 bits (898), Expect = 1.910e-108
Identity = 183/203 (90.15%), Postives = 193/203 (95.07%), Query Frame = 0
Query:    1 VVERAQQKLKLDAMIVQQGRLAENAKKLGKEQLLDALRFGADKVFRSKDTSITDADIDAIMEHGKEKTKALMESKLQISDKGDLLDFSLDGGIATQVYEGVDYSNKANRAEAAGGPVPFQLIDTGKRERKKVPSYKEDNFYRQQQAAAIKKRTVMPKHLRLPRMDECQFYDKKRLEQLHRREEQLFVEAKDKNLLPSDLNSYE 203
            VVERAQQKLKLDAMIVQQGRL +NAKKLGKEQLLDALRFGADKVFRSKDTSITDADIDAIM HGKEKTKALMESKLQ+SDKGDLLDFSLDGGIATQVYEGVDYSNKANRA+A GG VPFQ IDTGKRERKK+ SYKED FYRQQQAAAIK+RT+MPKHLRLPRMDECQFYDKKRLEQLHR+EEQLFVEAK+K  LP+DL +YE
Sbjct:  703 VVERAQQKLKLDAMIVQQGRLTDNAKKLGKEQLLDALRFGADKVFRSKDTSITDADIDAIMAHGKEKTKALMESKLQVSDKGDLLDFSLDGGIATQVYEGVDYSNKANRADAGGGAVPFQFIDTGKRERKKIASYKEDTFYRQQQAAAIKRRTMMPKHLRLPRMDECQFYDKKRLEQLHRKEEQLFVEAKEKGDLPNDLTNYE 905          
BLAST of mRNA_H-elongata_contig10730.601.1 vs. uniprot
Match: A0A835YGX5_9STRA (Putative chromatin remodelling complex ATPase chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGX5_9STRA)

HSP 1 Score: 207 bits (527), Expect = 6.910e-58
Identity = 123/201 (61.19%), Postives = 157/201 (78.11%), Query Frame = 0
Query:    1 VVERAQQKLKLDAMIVQQGRLAE-NAKKLGKEQLLDALRFGADKVFRSKDTSITDADIDAIMEHGKEKTKALMESKLQISDKGDLLDFSLDGGIATQVYEGVDYSNKANRAEAAGGPVPFQLIDTGKRERKKVPSY--KEDNFYRQQQAAAIKKR-TVMPKHLRLPRMDECQFYDKKRLEQLHRREEQLFVEAKDKNLLPS 197
            VVERAQQKLK+DAMIVQQGRL E N KK  K++LL+A+RFGAD VFRSK++SI+D DIDAI+  G+++TK + E+++  +DKGD+LDF LDGG+ TQ +EGVDYSN+ANR +A     PF  IDTGKRERKKV SY   E    +Q+ AAA +KR T +PKHLRLP+MDE QFYD+KRL +L+  EE+L+ +AK +  LPS
Sbjct:  734 VVERAQQKLKMDAMIVQQGRLQEQNNKKFSKDELLEAIRFGADSVFRSKESSISDEDIDAILAAGEKRTKEI-EARISKADKGDMLDFRLDGGLETQRFEGVDYSNRANRIDAG---APF-YIDTGKRERKKVQSYVSSETQGLQQKAAAAARKRGTRLPKHLRLPKMDEWQFYDRKRLTELNELEEELYAKAKQEGKLPS 929          
BLAST of mRNA_H-elongata_contig10730.601.1 vs. uniprot
Match: A0A7S3UVN6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVN6_HETAK)

HSP 1 Score: 177 bits (450), Expect = 1.400e-52
Identity = 111/200 (55.50%), Postives = 139/200 (69.50%), Query Frame = 0
Query:    1 VVERAQQKLKLDAMIVQQGRLAENAKKLGKEQLLDALRFGADKVFRSKDTSITDADIDAIMEHGKEKTKALMESKLQISDKGDLLDFSLDGGIATQVYEGVDYSNKANRAEAAGGPVPFQLIDTGKRERKKVPSYK--EDNF---YRQQQAAAI-----KKRTVMPKHLRLPRMDECQFYDKKRLEQLHRREEQLFVEAK 190
            VVERAQQKLKLDAM+VQQGRL E  KK+ K+ LL A+RFGAD+VFRSK+++ITD DIDAI+E GK KT  L E K+Q S+KGDLLDF LDGG  +Q +EGVDY ++  R+   G      +ID GKRERKKV  Y+  +D     +   +AAA      KKR+ +P+  RLPRMD+ Q++ K RLE LH  EE+ F E K
Sbjct:   18 VVERAQQKLKLDAMVVQQGRLQEKEKKVSKDDLLSAVRFGADQVFRSKESTITDEDIDAILERGKNKTAELQE-KIQASEKGDLLDFRLDGGFKSQEFEGVDYGDRETRSRMLG------VIDIGKRERKKVVQYQYADDPLAPAHGNAKAAAAAAWSGKKRSRLPRAFRLPRMDDWQWFAKGRLEALHAMEERKFAELK 210          
BLAST of mRNA_H-elongata_contig10730.601.1 vs. uniprot
Match: A0A7S2F963_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F963_9STRA)

HSP 1 Score: 187 bits (476), Expect = 2.770e-52
Identity = 110/204 (53.92%), Postives = 142/204 (69.61%), Query Frame = 0
Query:    1 VVERAQQKLKLDAMIVQQGRLAENAKKLGKEQLLDALRFGADKVFRSKDTSITDADIDAIMEHGKEKTKALMESKLQISDKGDLLDFSLDGGIATQVYEGVDYSNKANR-AEAAGGPVPFQLIDTGKRERKKVPSYKEDNFYRQQ--QAAAIKKRTVMPKHLRLPRMDECQFYDKKRLEQLHRREEQLFVEAKDKNLLPSDLNS 201
            VVERA QKLKLDAM+VQQGRL +  KKL KE +L A++FGAD VFR+ DTSITD DIDAI+E G++KT  L   KL+ + KGD+LDF LDG + TQVYEGVDYS+  NR +  A   V  Q     KR+RK V +Y ED +YR+Q    ++  ++  MPKHLRLP+M+E QFYD  +L+ LH  EE  ++E K+K  LP  + +
Sbjct:   53 VVERAHQKLKLDAMVVQQGRLQDKEKKLSKEDMLAAIKFGADHVFRANDTSITDEDIDAIIERGQKKTSDLF-GKLEEASKGDVLDFKLDGSMPTQVYEGVDYSDSKNRQSNLAELMVLDQATADDKRQRKPVTNYNEDAYYRKQINVGSSDARKVKMPKHLRLPKMEEWQFYDTDKLQSLHALEEARYMELKEKKALPPSIKT 255          
BLAST of mRNA_H-elongata_contig10730.601.1 vs. uniprot
Match: A0A4Q3BVT5_9BACT (SANT domain-containing protein n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q3BVT5_9BACT)

HSP 1 Score: 181 bits (459), Expect = 3.200e-52
Identity = 106/200 (53.00%), Postives = 143/200 (71.50%), Query Frame = 0
Query:    1 VVERAQQKLKLDAMIVQQGRLAENAKKLGKEQLLDALRFGADKVFRSKDTSITDADIDAIMEHGKEKTKALMESKLQISDKGDLLDFSLDGGIATQVYEGVDYSNKANRAEAAGGPVPFQLIDTGKRERKKVPSYKEDNFYRQQQAAAIK---KRTVMPKHLRLPRMDECQFYDKKRLEQLHRREEQLFVEAKDKNLLPS 197
            VVERAQQKLKLDAM+VQQGRL +  KK+ K+ LLD LRFGADK+FRSK+++ITDADID I+E GK +T+ + E KLQ+++KGD+ DF LDGG+  QV+EG DYS   ++ E     + F  ID GKRERK V SY E     Q +AAA++   K+  +P+HLRL ++++ QF+D+ RL +L   E +LF E  +K  +PS
Sbjct:   10 VVERAQQKLKLDAMVVQQGRLQDKEKKMSKQDLLDTLRFGADKIFRSKESTITDADIDLILEEGKRRTEEMTE-KLQVAEKGDMYDFRLDGGMGAQVFEGKDYSRDRDKGEK-NPLLNFAFIDPGKRERKTVLSYSES----QPRAAAVEEGEKKPKLPRHLRLNKLEDWQFFDRPRLGELQAEEVRLFDELVEKGEVPS 203          
BLAST of mRNA_H-elongata_contig10730.601.1 vs. uniprot
Match: A0A7S3HIT7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HIT7_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.690e-46
Identity = 104/188 (55.32%), Postives = 134/188 (71.28%), Query Frame = 0
Query:    1 VVERAQQKLKLDAMIVQQGRLAENAKKLGKEQLLDALRFGADKVFRSKDTSITDADIDAIMEHGKEKTKALMESKLQISDKGDLLDFSLDGGIATQVYEGVDYSNKANRAEAAGGPVPFQLIDTGKRERKKVPSYKEDNFYRQQQAAAIK--KRTVMPKHLRLPRMDECQFYDKKRLEQLHRREEQLF 186
            VVERAQQKLKLDAM+VQQGRL +  KK+ K+ LLD LRFGADK+FRSKD++I+DADID I+E G+++T+ +  +KLQ +DKGD+ DF LDGG+ATQV+EGVDYS K  R         F  +D GKRERK V +Y E       +A A+   KR  +P+HLRL +M++ QF+DK RL  L   E +LF
Sbjct:  407 VVERAQQKLKLDAMVVQQGRLQDKEKKMTKQDLLDTLRFGADKIFRSKDSTISDADIDLILEEGRKRTEEM--TKLQTNDKGDMYDFKLDGGMATQVFEGVDYSTKDARERELLAQSAF-FLDPGKRERKGVANYSETAT----RAPALDEDKRPKLPRHLRLNKMEDWQFFDKARLTDLQAEEIRLF 587          
BLAST of mRNA_H-elongata_contig10730.601.1 vs. uniprot
Match: A0A7S1USI6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1USI6_9STRA)

HSP 1 Score: 173 bits (438), Expect = 5.060e-46
Identity = 115/238 (48.32%), Postives = 156/238 (65.55%), Query Frame = 0
Query:    1 VVERAQQKLKLDAMIVQQGRLAENAKKLGKEQLLDALRFGADKVFRSKDTSITDADIDAIMEHGKEKTKALMESKLQISDKGDLLDFSLDGG-IATQVYEGVDYSNKANRAEAAGGPVPFQLIDTGKRERKKVPSYKEDNFYRQQQAA-------AIKKRTVMPKHLRLPRMDECQFYDKKRLEQLHRREEQLFVEAKDKNLLPSDLNSYEA-----REKERXXXXXXXEPSEQALLL 225
            +VERAQQKLKLDAM+VQQGRL E  +K+ +++LL+A+RFGADKVF++KD+SITD DID I++ GK+KT  L E KLQ +DKGDLLDF LDGG ++ Q +EG+DY+ KA +A+A      F ++D GKRER+ V +Y E   Y+ Q AA       A KK+  +PK LRLPRM+E Q +D+  L+++   EE+ F       LLP D+    A     +E+E+        P E   LL
Sbjct:  218 IVERAQQKLKLDAMVVQQGRLKEK-EKMSRDELLNAVRFGADKVFKTKDSSITDDDIDLILDQGKKKTAELNE-KLQNADKGDLLDFKLDGGGLSAQTFEGIDYA-KAAQAQAE----MFGIMDIGKRERRTVANYNESQLYQNQIAALQGTKKPAKKKQPKLPKSLRLPRMEEYQMFDRTALQKISEEEEKAF------KLLPEDIQKMAAGKIPKKEEEKEEGKEEAAPFEMPPLL 442          
BLAST of mRNA_H-elongata_contig10730.601.1 vs. uniprot
Match: A0A7S2UIC6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UIC6_9STRA)

HSP 1 Score: 172 bits (435), Expect = 1.490e-45
Identity = 106/198 (53.54%), Postives = 135/198 (68.18%), Query Frame = 0
Query:    1 VVERAQQKLKLDAMIVQQGRLAENAKKLGKEQLLDALRFGADKVFRSKDTSITDADIDAIMEHGKEKTKALMESKLQISDKGDLLDFSLDGGIATQVYEGVDYSNKANRAEAA-GGPVPFQLI---DTGKRERKKVPSYKEDNFYRQQQA--------AAIKKRTVMPKHLRLPRMDECQFYDKKRLEQLHRREEQLF 186
            VVERAQQKLKLDAM+VQQGRL +    L  E+LL A+RFGADKVF+SKD+SITD DID I++ GK+KT+ + E KLQ ++KGD+LDF LDGGI+TQ +EG+DYS +    +A     V  +L+   D GKRER+ V +Y ED  Y+QQ A           KK T +PK+LRLPRM+E Q +D+  L  L   EE  F
Sbjct:  673 VVERAQQKLKLDAMVVQQGRLKDKDS-LSSEELLAAVRFGADKVFKSKDSSITDDDIDMILDQGKKKTQEMNE-KLQNAEKGDMLDFKLDGGISTQTFEGIDYSQRGKDMDAVKAAQVQAELLGIMDMGKRERRTVANYNEDQLYKQQIALQQGGRVKVRKKKETRLPKYLRLPRMEEWQMFDRDALLALQEMEENAF 868          
BLAST of mRNA_H-elongata_contig10730.601.1 vs. uniprot
Match: A0A7S2LAQ2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LAQ2_9STRA)

HSP 1 Score: 169 bits (429), Expect = 9.400e-45
Identity = 101/209 (48.33%), Postives = 139/209 (66.51%), Query Frame = 0
Query:    1 VVERAQQKLKLDAMIVQQGRLAENAKKLGKEQLLDALRFGADKVFRSKDTSITDADIDAIMEHGKEKTKALMESKLQISDKGDLLDFSLDGGIATQVYEGVDYSNKANRAEAAGGPVPFQLIDTGKRERKKVPSYKEDNFYRQQQAAAI------KKRTVMPKHLRLPRMDECQFYDKKRLEQLHRREEQLFVEAKDKNLLPSDLNSYE 203
            +VERAQQKLKLDAM+VQQGRL +   KL  +++L A+RFGADK+F+S D+SIT+ DID I++ GK+KT+A+ E KL++++KGDLLDF LD G + Q +EGVDYS+  +R+E  G      ++D GKRER  V +Y E   Y+Q     +      KK   +PK LRLPRMDE Q +D+  L  +   EE+ +    D+  LP+DL   E
Sbjct:  424 IVERAQQKLKLDAMVVQQGRLKDAKAKLSSDEILKAVRFGADKIFKSTDSSITNDDIDLILDAGKKKTEAMNE-KLKVAEKGDLLDFKLDVGESLQTFEGVDYSHAQSRSEILG------ILDLGKRERNVVANYNESVLYKQVADGGLPKPERKKKEKRLPKFLRLPRMDEWQMFDRDTLNIIQLEEEKEYKRLADEGKLPTDLTKVE 625          
BLAST of mRNA_H-elongata_contig10730.601.1 vs. uniprot
Match: B8C4D6_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4D6_THAPS)

HSP 1 Score: 167 bits (424), Expect = 4.190e-44
Identity = 106/216 (49.07%), Postives = 140/216 (64.81%), Query Frame = 0
Query:    1 VVERAQQKLKLDAMIVQQGRLAENAKKLGKEQLLDALRFGADKVFRSKDTSITDADIDAIMEHGKEKTKALMESKLQISDKGDLLDFSLDGGIATQVYEGVDYSNKANRAEAAGGPVPFQLIDTGKRERKKVPSYKEDNFYRQQQAAA--------IKKRTVMPKHLRLPRMDECQFYDKKRLEQLHRREEQLFVEAKDKNLLPSDLNSYEAREKE 208
            VVERAQQKLKLDAM+VQQGRL +  K L +E+LLDA+RFGADK+F+SKD+SITD DID I+ +G +KT+ L + KLQ + KGD+LDF LDGG++ Q +EG+DYS +A  A+     +   ++D GKRER+ V +Y E+  Y QQ A          +KK   +PK  RLPRM+E Q +D+  L  L   EEQ F        LP D+   +  E E
Sbjct:  587 VVERAQQKLKLDAMVVQQGRLKDKDK-LSREELLDAVRFGADKIFKSKDSSITDDDIDIILGYGAKKTQELND-KLQAAQKGDMLDFKLDGGLSAQTFEGIDYSEEAKNAQFQAEILG--IMDVGKRERRTV-AYNENQLYMQQMAQQGANPPKKKVKKEIKLPKMFRLPRMEEWQMFDRDSLNALQEVEEQAF------RALPEDIQETKEGEAE 791          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10730.601.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV68_ECTSI1.910e-10890.15Probable chromatin remodelling complex ATPase chai... [more]
A0A835YGX5_9STRA6.910e-5861.19Putative chromatin remodelling complex ATPase chai... [more]
A0A7S3UVN6_HETAK1.400e-5255.50Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2F963_9STRA2.770e-5253.92Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A4Q3BVT5_9BACT3.200e-5253.00SANT domain-containing protein n=1 Tax=Verrucomicr... [more]
A0A7S3HIT7_9STRA1.690e-4655.32Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S1USI6_9STRA5.060e-4648.32Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2UIC6_9STRA1.490e-4553.54Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S2LAQ2_9STRA9.400e-4548.33Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
B8C4D6_THAPS4.190e-4449.07Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 172..192
NoneNo IPR availableGENE3D3.40.50.300coord: 1..80
e-value: 1.7E-6
score: 29.3
NoneNo IPR availablePANTHERPTHR10799:SF979coord: 1..213
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 1..213
IPR036306ISWI, HAND domain superfamilyGENE3D1.10.1040.30coord: 125..224
e-value: 4.0E-5
score: 26.2
IPR036306ISWI, HAND domain superfamilySUPERFAMILY101224HAND domain of the nucleosome remodeling ATPase ISWIcoord: 138..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10730contigH-elongata_contig10730:718..4630 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10730.601.1mRNA_H-elongata_contig10730.601.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10730 718..4630 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10730.601.1 ID=prot_H-elongata_contig10730.601.1|Name=mRNA_H-elongata_contig10730.601.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=227bp
VVERAQQKLKLDAMIVQQGRLAENAKKLGKEQLLDALRFGADKVFRSKDT
SITDADIDAIMEHGKEKTKALMESKLQISDKGDLLDFSLDGGIATQVYEG
VDYSNKANRAEAAGGPVPFQLIDTGKRERKKVPSYKEDNFYRQQQAAAIK
KRTVMPKHLRLPRMDECQFYDKKRLEQLHRREEQLFVEAKDKNLLPSDLN
SYEAREKEREKQREQEEPSEQALLLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036306ISWI_HAND-dom_sf