prot_H-elongata_contig100011.6.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig100011.6.1
Unique Nameprot_H-elongata_contig100011.6.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length101
Homology
BLAST of mRNA_H-elongata_contig100011.6.1 vs. uniprot
Match: D7FUT2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUT2_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 3.320e-46
Identity = 83/91 (91.21%), Postives = 86/91 (94.51%), Query Frame = 0
Query:    1 MGNKISLENELINLRLTSKQMQRSAIKCNKNEAAAKAKLRDAIKAGNIEGARIYGQNAIREKNQALNCLRLSSRIDAVGSRLETAIRMKQV 91
            MGNK+SLENELINLRLTSKQ QR AIKC KNE AAKAKLR+AIKAGNIEGARIYGQNAIREKNQ+LNCLRLSSRIDAV SRLETAIRMKQV
Sbjct:    1 MGNKVSLENELINLRLTSKQQQRGAIKCTKNENAAKAKLREAIKAGNIEGARIYGQNAIREKNQSLNCLRLSSRIDAVASRLETAIRMKQV 91          
BLAST of mRNA_H-elongata_contig100011.6.1 vs. uniprot
Match: A0A7S1Z7S6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z7S6_TRICV)

HSP 1 Score: 137 bits (346), Expect = 5.680e-39
Identity = 72/91 (79.12%), Postives = 81/91 (89.01%), Query Frame = 0
Query:    1 MGNKISLENELINLRLTSKQMQRSAIKCNKNEAAAKAKLRDAIKAGNIEGARIYGQNAIREKNQALNCLRLSSRIDAVGSRLETAIRMKQV 91
            MGNKISLE+ELINLR+TSKQMQRSA KC KNE AA  KL+ AIK GN EGARIYGQ+AIREKNQALNC+R++SRIDAV SR+ETA+RM QV
Sbjct:    1 MGNKISLEDELINLRITSKQMQRSAKKCEKNEKAALEKLKKAIKQGNAEGARIYGQDAIREKNQALNCIRMASRIDAVSSRIETAVRMNQV 91          
BLAST of mRNA_H-elongata_contig100011.6.1 vs. uniprot
Match: A0A7S4MGQ3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MGQ3_9STRA)

HSP 1 Score: 132 bits (333), Expect = 5.110e-37
Identity = 69/91 (75.82%), Postives = 80/91 (87.91%), Query Frame = 0
Query:    1 MGNKISLENELINLRLTSKQMQRSAIKCNKNEAAAKAKLRDAIKAGNIEGARIYGQNAIREKNQALNCLRLSSRIDAVGSRLETAIRMKQV 91
            MGN +SLE+ELINLR+TSKQMQRSA KC KNE AA  KL+ AIK+GN EGARIYGQ+AIREKNQALNC+R++SRIDAV SR+ETA+RM  V
Sbjct:    1 MGNSVSLEDELINLRITSKQMQRSAKKCEKNEKAAIEKLKKAIKSGNPEGARIYGQDAIREKNQALNCMRMASRIDAVASRIETAVRMNTV 91          
BLAST of mRNA_H-elongata_contig100011.6.1 vs. uniprot
Match: B8C7T4_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C7T4_THAPS)

HSP 1 Score: 131 bits (329), Expect = 2.170e-36
Identity = 71/91 (78.02%), Postives = 77/91 (84.62%), Query Frame = 0
Query:    1 MGNKISLENELINLRLTSKQMQRSAIKCNKNEAAAKAKLRDAIKAGNIEGARIYGQNAIREKNQALNCLRLSSRIDAVGSRLETAIRMKQV 91
            MGN ISLE ELINLR+TSKQMQRS+ KC KNE AA  KL+ AIK GN EGARIY Q+AIREKNQALNCLRL+SRIDAV SRLETA+RM  V
Sbjct:    1 MGNSISLEEELINLRMTSKQMQRSSKKCEKNEKAAVDKLKKAIKQGNSEGARIYAQDAIREKNQALNCLRLASRIDAVASRLETAVRMNTV 91          
BLAST of mRNA_H-elongata_contig100011.6.1 vs. uniprot
Match: A0A836C887_9STRA (Snf7-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C887_9STRA)

HSP 1 Score: 130 bits (328), Expect = 2.680e-36
Identity = 69/91 (75.82%), Postives = 82/91 (90.11%), Query Frame = 0
Query:    1 MGNKISLENELINLRLTSKQMQRSAIKCNKNEAAAKAKLRDAIKAGNIEGARIYGQNAIREKNQALNCLRLSSRIDAVGSRLETAIRMKQV 91
            MGNK+SLE ELINL+LT+KQMQRS+ KCNK EAAAKAK++ AI+ GN+EGA+I  QNAIREKNQ+LN LRL+SRIDAV +RLETA+RMKQV
Sbjct:    1 MGNKVSLETELINLKLTAKQMQRSSTKCNKAEAAAKAKVKVAIQKGNMEGAKIAAQNAIREKNQSLNYLRLASRIDAVAARLETAVRMKQV 91          
BLAST of mRNA_H-elongata_contig100011.6.1 vs. uniprot
Match: A0A7S2SCB7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SCB7_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.270e-34
Identity = 68/91 (74.73%), Postives = 78/91 (85.71%), Query Frame = 0
Query:    1 MGNKISLENELINLRLTSKQMQRSAIKCNKNEAAAKAKLRDAIKAGNIEGARIYGQNAIREKNQALNCLRLSSRIDAVGSRLETAIRMKQV 91
            MGNKISLE+ELINLR+TSKQMQRSA K  KNE A   KL+ AIK GN EGA+IYGQ+AIREKNQALNC R++SR+DAV SR+ETAIRM +V
Sbjct:    1 MGNKISLEDELINLRITSKQMQRSAKKSEKNEKANIEKLKQAIKKGNSEGAKIYGQSAIREKNQALNCQRMASRVDAVSSRIETAIRMGEV 91          
BLAST of mRNA_H-elongata_contig100011.6.1 vs. uniprot
Match: A0A836CEV0_9STRA (Snf7-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEV0_9STRA)

HSP 1 Score: 125 bits (314), Expect = 3.800e-34
Identity = 67/91 (73.63%), Postives = 80/91 (87.91%), Query Frame = 0
Query:    1 MGNKISLENELINLRLTSKQMQRSAIKCNKNEAAAKAKLRDAIKAGNIEGARIYGQNAIREKNQALNCLRLSSRIDAVGSRLETAIRMKQV 91
            MGNK+SLE ELIN+RLTSKQMQR++ KC KNEA+AK +++ +I+ GN+EGA+I  QNAIREKNQALN LRLSSRIDAV SRLETAIR KQ+
Sbjct:    1 MGNKVSLEEELINMRLTSKQMQRASKKCEKNEASAKNRVKLSIQKGNMEGAKIEAQNAIREKNQALNYLRLSSRIDAVSSRLETAIRTKQM 91          
BLAST of mRNA_H-elongata_contig100011.6.1 vs. uniprot
Match: A0A1E7FAS9_9STRA (Charged multivesicular body protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAS9_9STRA)

HSP 1 Score: 123 bits (308), Expect = 3.230e-33
Identity = 64/91 (70.33%), Postives = 78/91 (85.71%), Query Frame = 0
Query:    1 MGNKISLENELINLRLTSKQMQRSAIKCNKNEAAAKAKLRDAIKAGNIEGARIYGQNAIREKNQALNCLRLSSRIDAVGSRLETAIRMKQV 91
            MGN++SLE+E++NLR+ SKQMQRSA KC KNE A+  KL+ AI+ GN EGARIYGQ+AIREKNQALN LR++SRIDA  SR+ETA+RM QV
Sbjct:    1 MGNRVSLEDEMVNLRIVSKQMQRSAKKCEKNEKASMDKLKKAIQKGNHEGARIYGQDAIREKNQALNHLRMASRIDACSSRIETAVRMGQV 91          
BLAST of mRNA_H-elongata_contig100011.6.1 vs. uniprot
Match: A0A7R9WCX5_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WCX5_9STRA)

HSP 1 Score: 122 bits (307), Expect = 5.780e-33
Identity = 66/90 (73.33%), Postives = 76/90 (84.44%), Query Frame = 0
Query:    2 GNKISLENELINLRLTSKQMQRSAIKCNKNEAAAKAKLRDAIKAGNIEGARIYGQNAIREKNQALNCLRLSSRIDAVGSRLETAIRMKQV 91
            G K SLE+ELINLR+TSK MQRSA KC KNE AA  KL+ AIK GN EGARI+GQ+AIREKNQALNCL+++SRIDAV SR+ETA+RM  V
Sbjct:   13 GGKPSLEDELINLRITSKTMQRSAKKCEKNEKAAIEKLKKAIKQGNAEGARIHGQDAIREKNQALNCLKMASRIDAVSSRIETAVRMGTV 102          
BLAST of mRNA_H-elongata_contig100011.6.1 vs. uniprot
Match: A0A7S2L033_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L033_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.230e-32
Identity = 65/91 (71.43%), Postives = 77/91 (84.62%), Query Frame = 0
Query:    1 MGNKISLENELINLRLTSKQMQRSAIKCNKNEAAAKAKLRDAIKAGNIEGARIYGQNAIREKNQALNCLRLSSRIDAVGSRLETAIRMKQV 91
            MGNKISLE+ELINLR+TSK M RS++KC K+E AA  +L+ AIK GN EGARIY Q+AIREKNQA+N LR++SRIDAV +RLETAIRM  V
Sbjct:    1 MGNKISLEDELINLRITSKSMNRSSVKCKKSEKAALDRLKKAIKQGNTEGARIYAQDAIREKNQAVNHLRMASRIDAVAARLETAIRMDTV 91          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig100011.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUT2_ECTSI3.320e-4691.21Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1Z7S6_TRICV5.680e-3979.12Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S4MGQ3_9STRA5.110e-3775.82Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
B8C7T4_THAPS2.170e-3678.02Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A836C887_9STRA2.680e-3675.82Snf7-domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S2SCB7_9STRA1.270e-3474.73Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A836CEV0_9STRA3.800e-3473.63Snf7-domain-containing protein n=1 Tax=Tribonema m... [more]
A0A1E7FAS9_9STRA3.230e-3370.33Charged multivesicular body protein n=1 Tax=Fragil... [more]
A0A7R9WCX5_9STRA5.780e-3373.33Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2L033_9STRA1.230e-3271.43Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10476:SF2CHARGED MULTIVESICULAR BODY PROTEIN 1Bcoord: 7..92
NoneNo IPR availablePANTHERPTHR10476CHARGED MULTIVESICULAR BODY PROTEINcoord: 7..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig100011contigH-elongata_contig100011:909..1211 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig100011.6.1mRNA_H-elongata_contig100011.6.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig100011 909..1211 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig100011.6.1 ID=prot_H-elongata_contig100011.6.1|Name=mRNA_H-elongata_contig100011.6.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp
MGNKISLENELINLRLTSKQMQRSAIKCNKNEAAAKAKLRDAIKAGNIEG
ARIYGQNAIREKNQALNCLRLSSRIDAVGSRLETAIRMKQVIWERLMLKV
*
back to top