prot_H-elongata_contig107274.598.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig107274.598.1
Unique Nameprot_H-elongata_contig107274.598.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length288
Homology
BLAST of mRNA_H-elongata_contig107274.598.1 vs. uniprot
Match: A0A1X7UV95_AMPQE (Uncharacterized protein n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UV95_AMPQE)

HSP 1 Score: 78.6 bits (192), Expect = 8.660e-13
Identity = 67/270 (24.81%), Postives = 118/270 (43.70%), Query Frame = 0
Query:   39 VFQNPTYENSAGAWAFIEVLGKAYLHQVGEALDASDFLGLQVDESTDISDSNNCLI------------------------------------DGAAAMTWSRSGAATILAQEQPHRLLFHCVVHRQSLGAQAACLEVALTKEVDAVVTAVNGFFSHSSVRKGNLKIIQVANAIGGKNLPTLEGIYKIRFLSRGIAVESLCANYHAILIFMAEEAGQFFV-----LLERIASFQVMGMLLFMTDVLAILNSFNRFFQYRLLSYGDIRATLN 267
            V +N  Y +   A   +E +          +L AS F+G+ VDE TDI+  +N ++                                    DGA AMT  R G    + +  P+ +  HC+ +R SL    A  ++   +    V+ ++  +FSHSSVR   L+ IQ  N +    L   + +Y +R+LS  IAV ++     A++ F   EA Q+       L ++++++Q +     + DVL I+   ++ FQ   +++  I+  +N
Sbjct:   37 VTKNAQYSSHQIAEEMLEAISSCIEESTDLSLQASPFIGVMVDECTDIATVSNPIVYAKTFKDGDVHTNFLKCMQMEEDKAITLEKVLGLSTDGARAMTGLREGLTGYMKRANPYIVPIHCIAYRLSLATSQASKQITCLQRYKRVLVSIYSYFSHSSVRLDRLREIQ--NVLDSPVLKYKQ-LYYVRWLSLHIAVSAVQRTLPALISFFDNEASQYEDPAARGLTKQLSTYQFITTTNLLCDVLDIITRLSKIFQGTNIAFSIIQLMVN 303          
BLAST of mRNA_H-elongata_contig107274.598.1 vs. uniprot
Match: F0YST4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YST4_AURAN)

HSP 1 Score: 52.4 bits (124), Expect = 5.990e-5
Identity = 43/148 (29.05%), Postives = 72/148 (48.65%), Query Frame = 0
Query:   65 QVGEALDASDFLGLQVDESTDISDSNNCLIDGAAAMTWSRSGAATILAQEQPHRLLFHCVVHRQSLGAQAACLEVALTKEVDAVVTAVNGFFSHSSVRKGNLKIIQVANAIGGKNLPTLEGIYKIRFLSRGIAVESLCANYHAILIFM 212
            Q  E L  SD+    +DESTD+SDS N  I     + + ++G A+            HC+ HR +L A       +    V+  + A+   F+ SS RK + KI +V +  G     T++  + +R+LSR  A+ S+  ++  +L F+
Sbjct:    1 QFPEELAESDWCAASIDESTDVSDSQNAGI----CVFFVKNGEASCA----------HCICHRLALAANEFAALTSHASVVEKTLRAIRRIFAFSSKRK-DAKIQEVNDESG-----TIKKRHTVRWLSRKGALTSVVGSFRRVLDFV 128          
BLAST of mRNA_H-elongata_contig107274.598.1 vs. uniprot
Match: A0A2J7PBR0_9NEOP (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7PBR0_9NEOP)

HSP 1 Score: 54.7 bits (130), Expect = 8.470e-5
Identity = 54/223 (24.22%), Postives = 91/223 (40.81%), Query Frame = 0
Query:   55 IEVLGKAYLHQVGEALDASDFLGLQVDESTDISDSNNCLI----------------------------DGAAAMTWSRSGAATILAQEQPHRLLFHCVVHRQSLGAQAACLEVALTKEVDAVVTAVNGFFSHSSVRKGNLKIIQVANAIGGKNLPTLEGIYKIRFLSRGIAVESLCANYHAILIFMAEEAGQFFVLLERIASFQVMGMLLFMTDVLAILNSFN 249
            +E +     + V + +    +  + +DESTD+SD+N  LI                            DGA +MT + SG    L Q Q      HC++H+++L A++  L   +   V  +   + G     + RK    + ++ +A G   L T     ++R+LSRG  +       H I  F+ EE      L   +   + +  L F+TD+   LN  N
Sbjct:   47 LEDISNQISNNVKDIIANCSYFSIALDESTDVSDTNQLLIFVRAIKEDFTIFEELLKVCSLHSTTRVTDGAKSMTGTISGFVGFLRQNQITVPTLHCIIHQEALCAKSIKLSTTMAT-VTKITNLIRGGNRSLTHRKFLTLLEEMDSAYGDLLLHT-----EVRWLSRGKCLVRFFELRHEIATFLREEVTNSAELQNDLEDVEFLRNLAFLTDITQHLNVLN 263          
BLAST of mRNA_H-elongata_contig107274.598.1 vs. uniprot
Match: A0A2J7Q3W1_9NEOP (Dimer_Tnp_hAT domain-containing protein n=26 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7Q3W1_9NEOP)

HSP 1 Score: 54.7 bits (130), Expect = 9.200e-5
Identity = 54/223 (24.22%), Postives = 91/223 (40.81%), Query Frame = 0
Query:   55 IEVLGKAYLHQVGEALDASDFLGLQVDESTDISDSNNCLI----------------------------DGAAAMTWSRSGAATILAQEQPHRLLFHCVVHRQSLGAQAACLEVALTKEVDAVVTAVNGFFSHSSVRKGNLKIIQVANAIGGKNLPTLEGIYKIRFLSRGIAVESLCANYHAILIFMAEEAGQFFVLLERIASFQVMGMLLFMTDVLAILNSFN 249
            +E +     + V + +    +  + +DESTD+SD+N  LI                            DGA +MT + SG    L Q Q      HC++H+++L A++  L   +   V  +   + G     + RK    + ++ +A G   L T     ++R+LSRG  +       H I  F+ EE      L   +   + +  L F+TD+   LN  N
Sbjct:  148 LEDISNQISNNVKDIIANCSYFSIALDESTDVSDTNQLLIFVRAIKEDFTIFEELLKVCSLHSTTRVTDGAKSMTGTISGFVGFLRQNQITVPTLHCIIHQEALCAKSIKLSTTMAT-VTKITNLIRGGNRSLTHRKFLTLLEEMDSAYGDLLLHT-----EVRWLSRGKCLVRFFELRHEIATFLREEVTNSAELQNDLEDVEFLRNLAFLTDITQHLNVLN 364          
BLAST of mRNA_H-elongata_contig107274.598.1 vs. uniprot
Match: A0A2J7QY16_9NEOP (RNB domain-containing protein n=2 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7QY16_9NEOP)

HSP 1 Score: 54.7 bits (130), Expect = 9.500e-5
Identity = 54/223 (24.22%), Postives = 91/223 (40.81%), Query Frame = 0
Query:   55 IEVLGKAYLHQVGEALDASDFLGLQVDESTDISDSNNCLI----------------------------DGAAAMTWSRSGAATILAQEQPHRLLFHCVVHRQSLGAQAACLEVALTKEVDAVVTAVNGFFSHSSVRKGNLKIIQVANAIGGKNLPTLEGIYKIRFLSRGIAVESLCANYHAILIFMAEEAGQFFVLLERIASFQVMGMLLFMTDVLAILNSFN 249
            +E +     + V + +    +  + +DESTD+SD+N  LI                            DGA +MT + SG    L Q Q      HC++H+++L A++  L   +   V  +   + G     + RK    + ++ +A G   L T     ++R+LSRG  +       H I  F+ EE      L   +   + +  L F+TD+   LN  N
Sbjct:   47 LEDISNQISNNVKDIIANCSYFSIALDESTDVSDTNQLLIFVRAIKEDFTIFEELLKVCSLHSTTRVTDGAKSMTGTISGFVGFLRQNQITVPTLHCIIHQEALCAKSIKLSTTMAT-VTKITNLIRGGNRSLTHRKFLTLLEEMDSAYGDLLLHT-----EVRWLSRGKCLVRFFELRHEIATFLREEVTNSAELQNDLEDVEFLRNLAFLTDITQHLNVLN 263          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig107274.598.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A1X7UV95_AMPQE8.660e-1324.81Uncharacterized protein n=2 Tax=Amphimedon queensl... [more]
F0YST4_AURAN5.990e-529.05Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A2J7PBR0_9NEOP8.470e-524.22Dimer_Tnp_hAT domain-containing protein n=2 Tax=Cr... [more]
A0A2J7Q3W1_9NEOP9.200e-524.22Dimer_Tnp_hAT domain-containing protein n=26 Tax=C... [more]
A0A2J7QY16_9NEOP9.500e-524.22RNB domain-containing protein n=2 Tax=Cryptotermes... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46880FAMILY NOT NAMEDcoord: 6..92
coord: 94..274
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..195
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 214..224
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 246..287
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 196..213
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 225..245
NoneNo IPR availableTMHMMTMhelixcoord: 226..248

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig107274contigH-elongata_contig107274:378..2002 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig107274.598.1mRNA_H-elongata_contig107274.598.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig107274 369..2002 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig107274.598.1 ID=prot_H-elongata_contig107274.598.1|Name=mRNA_H-elongata_contig107274.598.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=288bp
MSKTLVNTMRMAVHIVEMENAVQQFPYLARLVRACDGSVFQNPTYENSAG
AWAFIEVLGKAYLHQVGEALDASDFLGLQVDESTDISDSNNCLIDGAAAM
TWSRSGAATILAQEQPHRLLFHCVVHRQSLGAQAACLEVALTKEVDAVVT
AVNGFFSHSSVRKGNLKIIQVANAIGGKNLPTLEGIYKIRFLSRGIAVES
LCANYHAILIFMAEEAGQFFVLLERIASFQVMGMLLFMTDVLAILNSFNR
FFQYRLLSYGDIRATLNKTKTQLRVTFLDVNGLQVRI*
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