prot_H-elongata_contig10713.589.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10713.589.1
Unique Nameprot_H-elongata_contig10713.589.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length277
Homology
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BLAST of mRNA_H-elongata_contig10713.589.1 vs. uniprot
Match: D8LU85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU85_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 5.470e-21
Identity = 46/91 (50.55%), Postives = 59/91 (64.84%), Query Frame = 0 
Query:    1 DGVLPAAELIYTMFQECPGWARSYGRHAAHMSLAVFRLYGRREPYDALKTIIGVADNEFIPDWE--GNQHGGHICGLGCCMTLAGVLLTLK 89
            DG+LP AEL   M  +CPGW RSYGRHAAH++LAVFRL+G R  YD L  ++    ++ IP ++  G  +GGH CGLG C  L+  L  L 
Sbjct:  317 DGMLPMAELTTAMLTKCPGWGRSYGRHAAHLALAVFRLHGHRHSYDTLSDLVRKTSDDPIPSFDDSGGGYGGHACGLGACRVLSESLSALS 407
[Close]
BLAST of mRNA_H-elongata_contig10713.589.1 vs. uniprot
Match: A0A6H5KXY9_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXY9_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 1.820e-19
Identity = 45/88 (51.14%), Postives = 56/88 (63.64%), Query Frame = 0 
Query:    1 DGVLPAAELIYTMFQECPGWARSYGRHAAHMSLAVFRLYGRREPYDALKTIIGVADNEFIPDWEGNQHGGHICGLGCCMTLAGVLLTL 88
            DG+LP AEL   M  +CPGW RSYGRHAAH+SLAVFRL+G R  YD L  ++    ++ IP +E +  GG  C LG C  L+  L  L
Sbjct:  459 DGMLPMAELTTAMLTKCPGWGRSYGRHAAHLSLAVFRLHGHRHSYDNLSDLVRKTSDDPIPPFEDSGGGGQACRLGACRVLSESLSAL 546
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10713.589.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LU85_ECTSI5.470e-2150.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KXY9_9PHAE1.820e-1951.14Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10713contigH-elongata_contig10713:2970..5238 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10713.589.1mRNA_H-elongata_contig10713.589.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10713 2970..5238 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10713.589.1 ID=prot_H-elongata_contig10713.589.1|Name=mRNA_H-elongata_contig10713.589.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=277bp
DGVLPAAELIYTMFQECPGWARSYGRHAAHMSLAVFRLYGRREPYDALKT
IIGVADNEFIPDWEGNQHGGHICGLGCCMTLAGVLLTLKPSDASGQTIPT
GSSTPPPPSPPPSLTTATITTSATSVCSQVESCSPDSGQAARIISQTTSR
DSLGDVSALCAGSKRGRASLIKHQQQLFAEAVTPSPVEASGHHVVAESRR
QRAMSLLSNVAPITRLGLTEEAQVGHHRSQNSGVRIKTSPSSQLPGNERA
FAAPRSAVKTVLDADSSLKVKTAGAVS
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