prot_H-elongata_contig107115.587.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig107115.587.1
Unique Nameprot_H-elongata_contig107115.587.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length236
Homology
BLAST of mRNA_H-elongata_contig107115.587.1 vs. uniprot
Match: D7G845_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G845_ECTSI)

HSP 1 Score: 383 bits (983), Expect = 3.580e-124
Identity = 205/247 (83.00%), Postives = 217/247 (87.85%), Query Frame = 0
Query:    1 MLTYFRVLKRRPPPPALFPVVMEGLAKFVHLVNLDTVEDLLDLLKDLLTHKE----LPLEAALYCVLAAFRALQGPGRELQTDEAAFVGALYRRLPDLLRRDIGDPTGRKTTACVVLVNDCLDAALGKRRELSTARVAAMIKRLLS-------SANPAWGAGAGGLLRGAHRLILRYPAAQQLLENELDRPGAGPFRPDIPNPEHANALSSAAWELSLLRHSSEPAVAAVATDVVAVGLQDGAVALA 236
            MLTYFRVLKRRPPPPALFP VMEGLAKFVHLVNLDTV+DLLDLLKDLLT +E    LPLEAAL+CVLAAFRALQGPGRELQTDEAAFV ALYRRLPDLLR + GD +GRKT  CV LV DCLDAALGKRRELSTARVAAMIKRLLS       SANPAWG GAGGLLRGAHRL+LRYPAAQQLLENE DRPG+GPFRPD+ NPEHANALSSAAWELSLLR+S EPA+AAVA D+VA+G QD A  LA
Sbjct:  589 MLTYFRVLKRRPPPPALFPAVMEGLAKFVHLVNLDTVQDLLDLLKDLLTEEEGEEELPLEAALHCVLAAFRALQGPGRELQTDEAAFVSALYRRLPDLLRPENGDASGRKTVLCVALVYDCLDAALGKRRELSTARVAAMIKRLLSISLQLTQSANPAWGLGAGGLLRGAHRLLLRYPAAQQLLENEQDRPGSGPFRPDLTNPEHANALSSAAWELSLLRNSCEPAIAAVAADIVALGSQDAASGLA 835          
BLAST of mRNA_H-elongata_contig107115.587.1 vs. uniprot
Match: A0A835YYK4_9STRA (CBF/Mak21 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYK4_9STRA)

HSP 1 Score: 190 bits (483), Expect = 5.170e-52
Identity = 117/222 (52.70%), Postives = 140/222 (63.06%), Query Frame = 0
Query:    2 LTYFRVLKRRPPPPALFPVVMEGLAKFVHLVNLDTVEDLLDLLKDLLTHKELPLEAALYCVLAAFRALQGPGRELQTDEAAFVGALYRRLPDLLRRDIGDPTGRKTTACVVLVNDCLDAALGKRRELSTARVAAMIKRLLSSANPAWGAGAGGLLRGAHRLILRYPAAQQLLENELDRPGAGPFRPDIPNPEHANALSSAAWELSLLRHSSEPAVAAVATDV 223
            L YFRVLK     PAL P VMEGLAKF HL+NLDTVEDLL LLK LL  ++L  EA+L+CVL AFR LQGPGRELQ D+  FV  LY  LP L      D   R   A V L  +C+D  L KRRE S ARVAA +KR+L  A       A  L+  AH L LRY  A+Q+LENE DR  AG +   + +P+HAN  +++ WELSLL+ S    VA  A+D+
Sbjct:  677 LMYFRVLKNHR-HPALLPAVMEGLAKFAHLINLDTVEDLLALLKGLLREEKLTFEASLHCVLMAFRTLQGPGRELQVDDKEFVVRLYALLPRL-----SDAANR---AYVTLATECVDTVLVKRREHSPARVAAFLKRILGLALHFPSGEAKALIGVAHALALRYGPARQMLENEQDRAAAGAYSALVEDPDHANPFATSCWELSLLKFSYHADVAKAASDM 889          
BLAST of mRNA_H-elongata_contig107115.587.1 vs. uniprot
Match: A0A1E7EU90_9STRA (NOC3p-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EU90_9STRA)

HSP 1 Score: 165 bits (417), Expect = 1.050e-43
Identity = 101/219 (46.12%), Postives = 140/219 (63.93%), Query Frame = 0
Query:    1 MLTYFRVLKRRPPPP--ALFPVVMEGLAKFVHLVNLDTVEDLLDLLKDLLTH-KELPLEAALYCVLAAFRALQGPGRELQTDEAAFVGALYRRLPDLLRRDIGDPTGRKTTACVVLVNDCLDAALGKRRELSTARVAAMIKRLLSSANPAWGAGAGGLLRGAHRLILRYPAAQQLLENELDRPGAGPFRPDIPNPEHANALSSAAWELSLLRHSSEPAV 216
            +LTYFR+LK         L PV +EGLAKF HL+N+DTV DLLD+LK+LL    +LPLEA+L CVL AF+ L+GPGRE+Q D+  ++  LY +L     R   + + RK T    L+  CL AA  KRRE ST RVAA +K+  + A  A    +  L+  A +++ RYP+A QLLE+E D   +G + PD+ +PEH+N  S++AWEL++L+    P V
Sbjct:  360 ILTYFRILKSTDTKTRHGLLPVALEGLAKFSHLINIDTVVDLLDVLKELLVEVDDLPLEASLNCVLTAFQTLEGPGREMQIDQKEYITPLYSQLA----RVGSEGSSRKITE---LLLRCLTAAFIKRREYSTVRVAAFLKQTFTVAMHAPVYTSVPLIALARQILQRYPSAHQLLESESDVITSGQYTPDVDDPEHSNPFSTSAWELAVLKFHFHPQV 571          
BLAST of mRNA_H-elongata_contig107115.587.1 vs. uniprot
Match: A0A7S4K774_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K774_9STRA)

HSP 1 Score: 164 bits (414), Expect = 1.830e-43
Identity = 102/231 (44.16%), Postives = 140/231 (60.61%), Query Frame = 0
Query:    2 LTYFRVLKRRPPPPA----LFPVVMEGLAKFVHLVNLDTVEDLLDLLKDLLTHK-ELPLEAALYCVLAAFRALQGPGRELQTDEAAFVGALYRRLPDLLRRDIGDPTGRKTTACVVLVNDCLDAALGKRRELSTARVAAMIKRLLSSANPAWGAGAGGLLRGAHRLILRYPAAQQLLENELDRPGAGPFRPDIPNPEHANALSSAAWELSLLRHSSEPAVAAVATDVVAVG 227
            LTYFRVLK           L P  +EGLAKF HL+N+DTVEDLLD+L+ +L     LPL+AAL CVL AF+ L+GPGRE+Q D   +V  LY ++P L     G  +G + T    L   C+ +A  +R+E S+ RVAA +KRL S+A  A    +  +L    +L+ RYP++Q+LLENE D   +G + PD  +PEH+N  +++ WEL+LLR  +   V A   D  A G
Sbjct:  315 LTYFRVLKADGLSDGRAAELLPPALEGLAKFAHLINMDTVEDLLDVLRAMLKRAGSLPLDAALNCVLTAFQTLEGPGREMQIDPKEYVLPLYAQIPRL-----GSESGARHTD---LALRCMTSAFLRRKEYSSVRVAAFVKRLSSAALHAPPPASAAMLCFVRQLLARYPSSQRLLENEQDIVASGAYAPDAEDPEHSNPYAASVWELALLRFRAHAPVVAEQADGAAAG 537          
BLAST of mRNA_H-elongata_contig107115.587.1 vs. uniprot
Match: A0A7S4ABC0_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ABC0_9STRA)

HSP 1 Score: 160 bits (406), Expect = 3.610e-42
Identity = 95/219 (43.38%), Postives = 138/219 (63.01%), Query Frame = 0
Query:    1 MLTYFRVLKRRPPPPA--LFPVVMEGLAKFVHLVNLDTVEDLLDLLKDLLTHKE-LPLEAALYCVLAAFRALQGPGRELQTDEAAFVGALYRRLPDLLRRDIGDPTGRKTTACVVLVNDCLDAALGKRRELSTARVAAMIKRLLSSANPAWGAGAGGLLRGAHRLILRYPAAQQLLENELDRPGAGPFRPDIPNPEHANALSSAAWELSLLRHSSEPAV 216
            +LTYFR+L+         + P  +EGLAKF HL+N+DTV DLLD+LK+LL   + LPLEA+L CVL AF+ L+GPGRE+Q D+  ++  LY +L       +G     K    ++L+  CL+AA  KRRE ST RVAA +K++ + A  +    +  L+  A +++ RYP+  QLLE+E D   +G + PD+ +PEH+N  S++AWELS L+    P V
Sbjct:  350 ILTYFRILRSTDSKTRHDILPAALEGLAKFSHLINIDTVVDLLDVLKELLVIVDTLPLEASLNCVLTAFQTLEGPGREMQIDQKEYIAPLYSQLAR-----VGTEENSKKNTRILLL--CLNAAFIKRREYSTVRVAAFVKQMFTVAMHSPVYTSVPLIALARQILQRYPSVHQLLESESDVITSGTYTPDVADPEHSNPFSTSAWELSCLKFHVHPQV 561          
BLAST of mRNA_H-elongata_contig107115.587.1 vs. uniprot
Match: A0A7S2EKH4_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EKH4_TRICV)

HSP 1 Score: 152 bits (383), Expect = 4.030e-42
Identity = 95/211 (45.02%), Postives = 125/211 (59.24%), Query Frame = 0
Query:    2 LTYFRVLKRRPPPPA----LFPVVMEGLAKFVHLVNLDTVEDLLDLLKDLLTHKE-LPLEAALYCVLAAFRALQGPGRELQTDEAAFVGALYRRLPDLLRRDIGDPTGRKTTACVVLVNDCLDAALGKRRELSTARVAAMIKRLLSSANPAWGAGAGGLLRGAHRLILRYPAAQQLLENELDRPGAGPFRPDIPNPEHANALSSAAWELSL 207
            LTYFRVLK      +    L P  +EGLAKF HL+N+DTV DLLD+LK +L   + LP +AAL CVL AF+ L+GPGRE+Q D+  ++  LY +LP L+  D     G        L   CL AA  +RRE S  RVAA ++RL S A  A    +  +L    +L+ RYP   +LLENE D   +G + P+  +PE  NA + +AWELSL
Sbjct:   28 LTYFRVLKSDDMTDSKVAELLPPALEGLAKFAHLINMDTVVDLLDVLKKMLKRVDALPTDAALNCVLTAFQTLEGPGREMQIDQKEYLLPLYNQLPRLVANDSCRDVG--------LALRCLSAAFLRRREYSDVRVAAFVRRLSSVALHAPPESSAPILAFVRQLLHRYPGISRLLENEQDVVASGRYLPESNDPERCNAFAGSAWELSL 230          
BLAST of mRNA_H-elongata_contig107115.587.1 vs. uniprot
Match: A0A448ZJX8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZJX8_9STRA)

HSP 1 Score: 160 bits (404), Expect = 6.780e-42
Identity = 97/219 (44.29%), Postives = 136/219 (62.10%), Query Frame = 0
Query:    1 MLTYFRVLKRRPPPPA--LFPVVMEGLAKFVHLVNLDTVEDLLDLLKDLLTHKE-LPLEAALYCVLAAFRALQGPGRELQTDEAAFVGALYRRLPDLLRRDIGDPTGRKTTACVVLVNDCLDAALGKRRELSTARVAAMIKRLLSSANPAWGAGAGGLLRGAHRLILRYPAAQQLLENELDRPGAGPFRPDIPNPEHANALSSAAWELSLLRHSSEPAV 216
            +LTYFRVLK         L P  +EGLAKF HLVN+DTV DLLD+LK+LL   + LPLEA+L CVL AF+ L+GPGRE+Q D+  ++  LY +L       +G     K    ++L   CL AA  KRRE S  RVAA +K++ + A  +    +  L+  A +++ RYP+  QLLE+E D   +G ++PD+ +PEH+N  S++AWEL+ L+    P V
Sbjct:  350 ILTYFRVLKSTDSKTRHDLLPAALEGLAKFSHLVNIDTVVDLLDVLKELLLIVDNLPLEASLNCVLTAFQTLEGPGREMQIDQKEYIAPLYSQLAR-----VGTEENSKKNTYILL--RCLTAAFIKRREYSIVRVAAFVKQMFTVAMHSPDYTSVPLIALARQILQRYPSVHQLLESESDVITSGTYKPDVADPEHSNPFSTSAWELACLKFHVHPQV 561          
BLAST of mRNA_H-elongata_contig107115.587.1 vs. uniprot
Match: B7FS96_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FS96_PHATC)

HSP 1 Score: 160 bits (404), Expect = 9.510e-42
Identity = 98/213 (46.01%), Postives = 133/213 (62.44%), Query Frame = 0
Query:    2 LTYFRVLKRRPPPPA----LFPVVMEGLAKFVHLVNLDTVEDLLDLLKDLLTHKE-LPLEAALYCVLAAFRALQGPGRELQTDEAAFVGALYRRLPDLLRRDIGDPTGRKTTACVVLVNDCLDAALGKRRELSTARVAAMIKRLLSSANPAWGAGAGGLLRGAHRLILRYPAAQQLLENELDRPGAGPFRPDIPNPEHANALSSAAWELSLLR 209
            LTYFR+LK      A    L P  +EGLAKF HL+N+DTV DLL +LKDLL     LPLEAAL C+L AF+ LQGPG+E+  D   ++  LY +LP L    +GD   R+    V+L   CL+AA  KRRE ST RV+A  K++L+ +       A  L+    +L+ RYP   Q+LENE D   +G + PD+ +PEH+N L+++AWEL+L +
Sbjct:  380 LTYFRILKHDNLQAAHVETLLPAALEGLAKFAHLINIDTVMDLLGVLKDLLKKMNALPLEAALNCILTAFQTLQGPGKEMNIDVKEYIVPLYTQLPRL----VGDVNCRRHLPTVLL---CLNAAFIKRREYSTIRVSAFWKQILTVSLHVPPHTAVPLIAFGRQLLQRYPVTHQMLENEQDVITSGEYTPDVEDPEHSNPLATSAWELALAK 585          
BLAST of mRNA_H-elongata_contig107115.587.1 vs. uniprot
Match: A0A7S2PRS0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PRS0_9STRA)

HSP 1 Score: 155 bits (391), Expect = 2.970e-41
Identity = 101/219 (46.12%), Postives = 131/219 (59.82%), Query Frame = 0
Query:    2 LTYFRVLKRRPPPPA---LFPVVMEGLAKFVHLVNLDTVEDLLDLLKDLL-THKELPLEAALYCVLAAFRALQGPGRELQTDEAAFVGALYRRLPDLLRRDIGDPTGRKTTACVVLVNDCLDAALGKRRELSTARVAAMIKRLLSSANPAWGAGAGGLLRGAHRLILRYPAAQQLLENELDRPGAGPFRPDIPNPEHANALSSAAWELSLLRHSSEPAV 216
            LTYFR+LK          L PV +EGLAKF HL+N+DTVEDLL+ LK LL T  ELPL+A+L C+L +F  LQGPGREL+ D+  +V  LY +L     R     T + T     LV  CL+ A  KRRE S  RVAA IK+LL+ A  A    +  ++  A  L  RY    QLLENELD   +G + P   +P+++N  ++AAWELS L+   +P V
Sbjct:  144 LTYFRILKSHGAGKNALHLLPVALEGLAKFSHLINIDTVEDLLEHLKGLLATVDELPLDASLNCILTSFSTLQGPGRELKIDQKEYVAPLYSQLS----RICSSSTIQHTN----LVLRCLNLAFLKRREFSNTRVAAFIKKLLTVAVHAPPYCSASMIAFARLLFHRYQGTHQLLENELDVVSSGKYSPFTEDPDYSNPFAAAAWELSALKFHIQPVV 354          
BLAST of mRNA_H-elongata_contig107115.587.1 vs. uniprot
Match: A0A7S2YSV4_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YSV4_9STRA)

HSP 1 Score: 154 bits (388), Expect = 1.250e-40
Identity = 93/211 (44.08%), Postives = 135/211 (63.98%), Query Frame = 0
Query:    2 LTYFRVLK--RRPPPPALFPVVMEGLAKFVHLVNLDTVEDLLDLLKDLLTHKEL-PLEAALYCVLAAFRALQGPGRELQTDEAAFVGALYRRLPDLLRRDIGDPTGRKTTACVVLVNDCLDAALGKRRELSTARVAAMIKRLLSSANPAWGAGAGGLLRGAHRLILRYPAAQQLLENELDRPGAGPFRPDIPNPEHANALSSAAWELSLLR 209
            LTYFR+LK         + PV + GLAKF HL+N+DTV+DLL +LKDLL + +L PL+AAL C+L AF+ LQGPG+EL+ D+  +V  LY ++  +  ++       K T  ++    CL AA  K++E S  RVAA +K++LS+A  +    A  LL    +++ RYP+AQQLLENE D   +G + PD+ +PE +N  +++ WELS LR
Sbjct:  151 LTYFRILKSDNLQAMEDVLPVALAGLAKFAHLINIDTVKDLLAVLKDLLKNVDLLPLDAALNCILTAFQTLQGPGQELKIDQKEYVVPLYSQIARITTKE----NSLKHTEILL---KCLSAAFLKQKEFSNVRVAAFVKQILSAAIHSPSYTAVPLLAFVRQMMQRYPSAQQLLENENDVITSGEYTPDVIDPEQSNPFATSGWELSTLR 354          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig107115.587.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G845_ECTSI3.580e-12483.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YYK4_9STRA5.170e-5252.70CBF/Mak21 family-domain-containing protein n=1 Tax... [more]
A0A1E7EU90_9STRA1.050e-4346.12NOC3p-domain-containing protein n=1 Tax=Fragilario... [more]
A0A7S4K774_9STRA1.830e-4344.16Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S4ABC0_9STRA3.610e-4243.38Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S2EKH4_TRICV4.030e-4245.02Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A448ZJX8_9STRA6.780e-4244.29Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
B7FS96_PHATC9.510e-4246.01Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2PRS0_9STRA2.970e-4146.12Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2YSV4_9STRA1.250e-4044.08Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005612CCAAT-binding factorPFAMPF03914CBFcoord: 61..220
e-value: 1.1E-15
score: 58.1
IPR016903Nucleolar complex-associated protein 3PANTHERPTHR14428NUCLEOLAR COMPLEX PROTEIN 3coord: 2..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig107115contigH-elongata_contig107115:175..1429 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig107115.587.1mRNA_H-elongata_contig107115.587.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig107115 169..1429 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig107115.587.1 ID=prot_H-elongata_contig107115.587.1|Name=mRNA_H-elongata_contig107115.587.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=236bp
MLTYFRVLKRRPPPPALFPVVMEGLAKFVHLVNLDTVEDLLDLLKDLLTH
KELPLEAALYCVLAAFRALQGPGRELQTDEAAFVGALYRRLPDLLRRDIG
DPTGRKTTACVVLVNDCLDAALGKRRELSTARVAAMIKRLLSSANPAWGA
GAGGLLRGAHRLILRYPAAQQLLENELDRPGAGPFRPDIPNPEHANALSS
AAWELSLLRHSSEPAVAAVATDVVAVGLQDGAVALA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005612CCAAT-binding_factor
IPR016903Nucleolar_cplx-assoc_3