prot_H-elongata_contig107110.586.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig107110.586.1
Unique Nameprot_H-elongata_contig107110.586.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length172
Homology
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BLAST of mRNA_H-elongata_contig107110.586.1 vs. uniprot
Match: A0A2R5GY31_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GY31_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 7.580e-11
Identity = 56/174 (32.18%), Postives = 78/174 (44.83%), Query Frame = 0 
Query:    1 RVNNRAKELEVIVLWTQHETATQILWARIIRGCEGGDLAKRIVKIQRVKQKSDHLTRFDIYCASKGHQQ--DLLVRLRRHQHKWGWYLCRYIAEKVLDPKSRQDSRRKVIIEDSPAQQKEANPWLRVCTLNVNGVRGKQIDLRYLLENRQIGCLALQETLLRATDWNLNISGYH 172
            RV N A  +  I +W +   +    WAR+        + +RI+K+ +V Q    L RFD+Y  S    +  DLL R  R +  W   L R   E+                + + A    A   LR+   N+NG+R K+ DL  LL+       ALQETLLRATDW    S Y+
Sbjct:  128 RVLNGAAGVSQICVWGETSPSMACFWARLEYCVPNAQVRRRILKVNKVLQAEREL-RFDVYVVSTEAARILDLLRRNGRRRFDWHTRLHRPYHEREHPG------------DAAAAPAAGALKDLRLLAWNINGLRRKREDLASLLQTTVPHVAALQETLLRATDWRTRASKYN 288
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig107110.586.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2R5GY31_9STRA7.580e-1132.18Uncharacterized protein (Fragment) n=1 Tax=Hondaea... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 122..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig107110contigH-elongata_contig107110:858..1373 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig107110.586.1mRNA_H-elongata_contig107110.586.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig107110 858..1373 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig107110.586.1 ID=prot_H-elongata_contig107110.586.1|Name=mRNA_H-elongata_contig107110.586.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=172bp
RVNNRAKELEVIVLWTQHETATQILWARIIRGCEGGDLAKRIVKIQRVKQ
KSDHLTRFDIYCASKGHQQDLLVRLRRHQHKWGWYLCRYIAEKVLDPKSR
QDSRRKVIIEDSPAQQKEANPWLRVCTLNVNGVRGKQIDLRYLLENRQIG
CLALQETLLRATDWNLNISGYH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf