mRNA_H-elongata_contig10707.581.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig10707.581.1 vs. uniprot
Match: D7FM20_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM20_ECTSI) HSP 1 Score: 308 bits (790), Expect = 7.500e-99 Identity = 154/210 (73.33%), Postives = 180/210 (85.71%), Query Frame = 1
Query: 1 EQICQLKQQLMALGEQPMEEVVSLQEGKQRLREAIDALMGGDSSTETEQALQKWDRYVTNHPDHIKEQEKEVREWEEGNAARNAEALNLMKTFVPPEIFHAGLAELRDGGLSPAVAKRVFERKVLWLIRAPEGIISRTHVVELKSKFVANDLDIVESRALHACLPNRFENDADGAKFAWREGFRKRLRELLAKEAAGGLKPQEMRHPTYK 630
E I L++QL ALGEQP+EEVV+L+E K+RLREAIDALM GD+S E E AL+KWD+YVTNHPDHIKEQ E + WE N +N EAL+LMKTFVPP+IFHAGL LR GGL+PA+AKR+F+RKVLWLIRAP G++S+THVVELKSK++ANDLD+VESRALHACLP+ FENDADGAK AWR GFRKRL+ELL KEAAG LKP E+R P YK
Sbjct: 32 ELISTLRRQLTALGEQPIEEVVTLEEAKKRLREAIDALMAGDASAEMELALEKWDKYVTNHPDHIKEQAAEEQAWEAANEPKNNEALHLMKTFVPPDIFHAGLDGLRGGGLTPALAKRMFDRKVLWLIRAPIGMVSKTHVVELKSKYLANDLDVVESRALHACLPSTFENDADGAKTAWRAGFRKRLKELLDKEAAGQLKPAELRRPVYK 241
BLAST of mRNA_H-elongata_contig10707.581.1 vs. uniprot
Match: A0A7S2RMF6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RMF6_9STRA) HSP 1 Score: 176 bits (445), Expect = 4.040e-47 Identity = 89/208 (42.79%), Postives = 134/208 (64.42%), Query Frame = 1
Query: 4 QICQLKQQLMALGEQPMEEVVSLQEGKQRLREAIDALMGGDSSTETEQALQKWDRYVTNHPDHIKEQEKEVREWEEGNAARNAEALNLMKTFVPPEIFHAGLAELRDGGLSPAVAKRVFERKVLWLIRAPEGIISRTHVVELKSKFVANDLDIVESRALHACLPNRFENDADGAKFAWREGFRKRLRELLAKEAAGGLKPQEMRHPTY 627
QI LK QL G +P++EVVSL+E KQRL+ A++ ++GG+ + + KWD Y+ HP+H +EQ++ REWEE N +N +AL ++TFVPP+I++A L L+ G+ +AKR+++RK+LW R+ II++TH +LK KF LD+ E RA+ A LP F+ND+ G K WRE F +L+E++ +E L + H TY
Sbjct: 659 QIEMLKLQLKNAGVKPIDEVVSLEEAKQRLKRAVEQMIGGNEDAQVD--FDKWDEYIRCHPEHKEEQQRLAREWEEKNREKNEQALRALRTFVPPDIYYATLDGLKLRGVQTPLAKRLWDRKILWWCRSEPSIIAKTHAADLKVKFAFQGLDLRELRAVSAMLPQTFDNDSTGDKKKWRENFMTKLKEMVQQEEQNRLPAAQQIHRTY 864
BLAST of mRNA_H-elongata_contig10707.581.1 vs. uniprot
Match: A0A7S2R6X4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6X4_9STRA) HSP 1 Score: 172 bits (436), Expect = 4.100e-46 Identity = 90/209 (43.06%), Postives = 129/209 (61.72%), Query Frame = 1
Query: 7 ICQLKQQLMALGEQPMEEVVSLQEGKQRLREAIDALMGGDSSTETEQA-LQKWDRYVTNHPDHIKEQEKEVREWEEGNAARNAEALNLMKTFVPPEIFHAGLAELRDGGLSPAVAKRVFERKVLWLIRAPEGIISRTHVVELKSKFVANDLDIVESRALHACLPNRFENDADGAKFAWREGFRKRLRELLAKEAAGGLKPQEMRHPTYK 630
I L +QL + G+Q + EVVSL + + L+EA+ LM G+ + + QA KWDR+V NHP+ I +++ + W++ A N AL LM+TFVPP I+ + L L+D GL + KR++E+KVLWL RAP+ I+R HV +L K+ LD++E RA+ A LP +FEND D K WR RL+EL++ E G L RH +YK
Sbjct: 246 IAMLIKQLESHGDQAITEVVSLDKAQASLQEALGQLMSGEGNLDAAQAEFDKWDRFVRNHPEFIAQEQAKREAWDQAQAPLNTSALQLMRTFVPPNIWSSSLTTLKDSGLPSGLVKRLWEKKVLWLTRAPKDFIARIHVADLNMKYSIQGLDLMELRAVWAALPEKFENDGDDRKAGWRLKIHDRLKELVSSEDRGSLSGPLRRHASYK 454
BLAST of mRNA_H-elongata_contig10707.581.1 vs. uniprot
Match: A0A7S2SCH3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCH3_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.310e-42 Identity = 82/209 (39.23%), Postives = 126/209 (60.29%), Query Frame = 1
Query: 4 QICQLKQQLMALGEQPMEEVVSLQEGKQRLREAIDALMGGDSSTETEQALQKWDRYVTNHPDHIKEQEKEVREWEEGNAARNAEALNLMKTFVPPEIFHAGLAELRDGGLSPAVAKRVFERKVLWLIRAPEGIISRTHVVELKSKFVANDLDIVESRALHACLPNRFENDADGAKFAWREGFRKRLRELLAKEAAGGLKPQEMRHPTYK 630
Q+ LK QL A+G +P+E V+L +++++EA+ LM GD E + ++KWD + +P++ +EQE++ R+W E N +N EA M+ VPP+I L L + GL A+AKR++++K+LW++R I+ H +L++K+ LDI+E RA+ LP FEND DG K WR FR++L EL KE L E R+ YK
Sbjct: 73 QVAMLKHQLKAVGAEPVE-CVTLDVAREKMQEAVQRLMAGDEMAEKD--IEKWDTAIKMNPEYQQEQEEKARKWAEDNKEKNEEACRTMRGLVPPDIKQCSLKTLMERGLPRALAKRLWDKKILWMLRMHPLDIALIHQADLRAKYPNQGLDIIEMRAVWTVLPEDFENDGDGKKAEWRFNFRQKLEELTTKEEQNRLARNEKRNNAYK 278
BLAST of mRNA_H-elongata_contig10707.581.1 vs. uniprot
Match: F0XVV0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVV0_AURAN) HSP 1 Score: 152 bits (383), Expect = 4.820e-39 Identity = 86/223 (38.57%), Postives = 129/223 (57.85%), Query Frame = 1
Query: 4 QICQLKQQLMALGEQPMEEVVSLQEGKQRLREAIDALMGGDSST------------ETEQALQKWDRYVTNHPDHIKEQEKEVREWEEGNAARNAEALNLMKTFVPPEIFHAGLAELR--DGGLSPAVAKRVFERKVLWLIRAPEGIISRTHVVELKSKFVANDLDIVESRALHACLPN-RFENDADGAKFAWREGFRKRLRELLAKEAAGGLKPQEMRHPTY 627
QI L +QL A G+ + EVV L E K RL+ A+ ++GGD ++ E E ++KWD ++T+HP+H++ Q W + N A+A +KT VPP++F +G + R GLS A+A+RV+ER LWL+RA + +R H +L+ KF DLD+ E RAL+ + + FENDA K AWR+G +RL+ +A + AG L ++ RH Y
Sbjct: 293 QIAMLTKQLEAAGQSAITEVVPLAEAKHRLQAALAVIVGGDGASKRRASERQLTQAEAEAEMEKWDTFITHHPEHVEAQRAARERWWDANGEACADAARALKTCVPPDVFASGTSRERLVAAGLSEALAQRVYERPALWLLRAEDAFAARVHDADLRGKFAFEDLDLRELRALYGRVRDLAFENDAARRKDAWRDGLLERLQSRVAADDAGSLDKRKRRHAAY 515
BLAST of mRNA_H-elongata_contig10707.581.1 vs. uniprot
Match: A0A7S2G2R7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G2R7_9STRA) HSP 1 Score: 149 bits (376), Expect = 2.530e-38 Identity = 78/205 (38.05%), Postives = 125/205 (60.98%), Query Frame = 1
Query: 16 LKQQLMALGEQPMEEVVSLQEGKQRLREAIDALMGGDSSTETEQALQKWDRYVTNHPDHIKEQEKEVREWEEGNAARNAEALNLMKTFVPPEIFHAGLAELRDGGLSPAVAKRVFERKVLWLIRAP-EGIISRTHVVELKSKFVANDLDIVESRALHACLPNRFENDADGAKFAWREGFRKRLRELLAKEAAGGLKPQEMRHPTY 627
L QL +P+ EVV L+E K+R++ A+ ++ GD E E KWD Y+ HPD+++++ +++ EW E AL LM +++P +IF+ AEL + G+SPA+A+R+F++KVLW +R P + I++ H +L K+ LD+VE++A+ A +P++FEND G K WR+ +LREL K G L +E+R Y
Sbjct: 161 LMSQLKGANIEPILEVVGLEEAKERMKNAVSLMLQGD--IEAEAVFDKWDTYIRAHPDYVRDEARKLAEWTESTKRDCDIALQLMLSYIPGDIFNISKAELINRGVSPALARRIFDKKVLWWLRLPNQSTIAKMHGADLTYKYSMQGLDLVETQAVWAVVPDKFENDRSGEKEQWRQNCLLKLRELTKKRDKGTLAKKEVRAAAY 363
BLAST of mRNA_H-elongata_contig10707.581.1 vs. uniprot
Match: A0A2P6FUZ7_9RHOB (Uncharacterized protein n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A2P6FUZ7_9RHOB) HSP 1 Score: 136 bits (343), Expect = 1.590e-35 Identity = 72/207 (34.78%), Postives = 123/207 (59.42%), Query Frame = 1
Query: 16 LKQQLMALGEQPMEEVVSLQEGKQRLREAIDALMGGDSSTETEQALQKWDRYVTNHPDHIKEQEKEVREWEEGNAARNAEALNLMKTFVPPEIF-HAGLAELRDGGLSPAVAKRVFERKVLWLIRAPEGIISRTHVVELKSKFVANDLDIVESRALHACLPNRFENDADGAKFAWREGFRKRLRELLAKEAAGGLKPQEMRHPTYKV 633
LK QL G +P+ E+ S ++GK +LR A++A++ DS ++ ++KWD ++ NHP IKEQ++E + WE +A N K ++P +IF +A + L + G+S +A R+ + LWL+R + ++ H+ +LK K+ LDI+E RAL++CLP++F+ND + K W+ + L++L KE L + +R+ Y V
Sbjct: 82 LKSQLENAGIRPISEITSYEDGKSQLRSALEAVIKEDSFLNLKE-VEKWDEFIKNHPQFIKEQKEENKIWEANAQVAAEKARNEQKKYIPEDIFKNASIINLNNYGVSKNLATRIMRNRALWLVRMDKKDVANVHIADLKFKYSFTGLDIIELRALYSCLPDKFDNDXNNEKEDWKNSLIQSLKDLENKEKNNTLPKRLIRNSAYCV 287
BLAST of mRNA_H-elongata_contig10707.581.1 vs. uniprot
Match: F0YA97_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YA97_AURAN) HSP 1 Score: 130 bits (328), Expect = 4.900e-32 Identity = 75/191 (39.27%), Postives = 113/191 (59.16%), Query Frame = 1
Query: 16 LKQQLMALGEQPMEEVVSLQEGKQRLREAIDALMGGDSSTETEQALQKWDRYVTNHPDHIKEQEKEVREWEEGNAARNAEALNLMKTFVPPEIFHAG--LAELRDGGLSPAVAKRVFERKVLWLIRAPEGIISRTHVVELKSKFVANDLDIVESRALHACLPNRFENDADGAKFAWREGFRKRLRELLAKE 582
LK QL G ++EVVS +E K +LR A L+GGD S E E+ +++WD ++ HP+ E+ + W +A NA AL +++ FVPP + G LA+L +G L A AKRVF LWL RA +G I++ H+ +L+S++ L ++E RA++A LP F+ D K +WR ++L E +AKE
Sbjct: 188 LKSQLKRAGVTAIDEVVSFEEAKVKLRAAAARLLGGDGSLEDEREMERWDAFLRVHPEKAAEEARAAAAWRRDHAPANAAALRVVRGFVPPAMTSTGASLAQL-EGRLPKAAAKRVFANPALWLTRASKGAIAKVHIADLRSRYHVQSLSLLELRAVYAALPEAFD---DAEKASWRADLERKL-ERMAKE 373
BLAST of mRNA_H-elongata_contig10707.581.1 vs. uniprot
Match: A0A6C0L2P5_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0L2P5_9ZZZZ) HSP 1 Score: 122 bits (307), Expect = 3.820e-30 Identity = 67/210 (31.90%), Postives = 117/210 (55.71%), Query Frame = 1
Query: 1 EQICQLKQQLMALGEQPMEEVVSLQEGKQRLREAIDALMGGDSSTETEQALQKWDRYVTNHPDHIKEQEKEVREWEEGNAARNAEALNLMKTFVPPEIFHAGLAE-LRDGGLSPAVAKRVFERKVLWLIRAPEGIISRTHVVELKSKFVANDLDIVESRALHACLPNRFENDADGAKFAWREGFRKRLRELLAKEAAGGLKPQEMRHPTY 627
EQI LK QL G +P+ E+VS + K+ L +A+ DS E + +++WD ++ NHP +I+E++++ W+ N +N EAL + + +P I+ + L + GL +A R+ +VLWL+ I+ H+ +L+ K+ LD++E RAL+AC+P +FE+D G K W R++L +++ +E L + R+ Y
Sbjct: 83 EQIEVLKSQLNNAGIKPLSEMVSYETAKEYLTKALKNASESDSY-ENIKEVERWDEFIKNHPKYIEEEKEKEEAWKNDNFLKNIEALEVQRNIIPNNIYSGASVDILMEKGLKKELAVRLMRNRVLWLVHMNPNEIAPIHLADLRFKYSFTGLDLIEMRALYACMPEKFEHDDTGEKMQWLSSVREKLSDMINQEKNNTLIARLKRNSAY 291
BLAST of mRNA_H-elongata_contig10707.581.1 vs. uniprot
Match: A0A812RDG1_SYMMI (Nphp3 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RDG1_SYMMI) HSP 1 Score: 127 bits (318), Expect = 4.070e-30 Identity = 74/190 (38.95%), Postives = 114/190 (60.00%), Query Frame = 1
Query: 16 LKQQLMALGEQPMEEVVSLQEGKQRLREAIDALMGGDSSTETEQALQKWDRYVTNHPDH-IKEQEKEVREWEEGNAARNAEALNLMKTFVPPEIFHAGLAELRDGGLSPAVAKRVFERKVLWLIRAPEGIISRTHVVELKSKFVANDLDIVESRALHACLPNRFENDADGAKFAWREGFRKRLRELLAKE 582
L Q+++LG +P+ EVV+ + +QRL+ A+ LM GD E + KWD++V NHP++ +KE ++++ W N NA AL ++ VPP I L+ L + L PA+AKRV+ +K LWL R I R H+ +L++K+ LD +E RA+ A LP+ FEND G K AW++G + L+ +E
Sbjct: 611 LTNQVVSLGVEPIAEVVTFPKAEQRLQSALVRLMEGDE--EAAKDFDKWDQFVRNHPEYKVKEVARKLK-WTRENLPINAAALRHIRGLVPPSIVSGTLSMLEEK-LPPAIAKRVWSKKALWLTRIAPNRIGRLHIADLQTKYSTQGLDEIELRAVFASLPDTFENDGKGDKAAWKDGVLQSLQSKCKQE 796 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10707.581.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10707.581.1 >prot_H-elongata_contig10707.581.1 ID=prot_H-elongata_contig10707.581.1|Name=mRNA_H-elongata_contig10707.581.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=203bp MALGEQPMEEVVSLQEGKQRLREAIDALMGGDSSTETEQALQKWDRYVTNback to top mRNA from alignment at H-elongata_contig10707:2542..4021+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10707.581.1 ID=mRNA_H-elongata_contig10707.581.1|Name=mRNA_H-elongata_contig10707.581.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1480bp|location=Sequence derived from alignment at H-elongata_contig10707:2542..4021+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10707:2542..4021+ >mRNA_H-elongata_contig10707.581.1 ID=mRNA_H-elongata_contig10707.581.1|Name=mRNA_H-elongata_contig10707.581.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1218bp|location=Sequence derived from alignment at H-elongata_contig10707:2542..4021+ (Himanthalia elongata Himel1 dioecious)back to top |