mRNA_H-elongata_contig20422.5810.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig20422.5810.1
Unique NamemRNA_H-elongata_contig20422.5810.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig20422.5810.1 vs. uniprot
Match: D7FIH5_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH5_ECTSI)

HSP 1 Score: 260 bits (665), Expect = 1.030e-79
Identity = 148/320 (46.25%), Postives = 186/320 (58.13%), Query Frame = 1
Query:    4 AVAKLDADGSFLWAWVEGSEGSEYLLDAVAVADGGVVVAGVSSGTWNGVGSTRDVNFAAIKLDSDGEVVWRWQNGTSGSDEMRACVETTDGNVVLAGFTDHSWAEGIYNDGWNDAVAVKLSVDKGEMIWSYQVGEG*NYDDADAYVYDAVARADGSIVLCGQTFGSFTAGESFSGE-DGSSDFLAVAIDEDRNELWRWQDGPGVGMNAFMAAGAFEDGSVVLAGFTEGNWYGSNMGGCDFAAVKRDASGGEKWRIQFGTELDDSWKGAAVGSDD-SLVLTGYTYGSWIEDQAGGDFDQDFVGISWDAEGNILWAYQVRTS 957
            AV KLD+DG  LW+W EG+ G + + DA A  DGGVVV G S+GT +GV S    +F AIK DSDG   WRWQ GT   + +  C +T DGNVVL G T   W E   N G    VAVKL V  G +IW YQ G              A +RADGSIV+ G T G +       GE  G +DF +VA+DED +ELWR+QDG    +++     A  DGSVVLAG T+G++ G+N G  DFA VK    G   W  Q GT  D+S++G A G D  S+V  GYT+G+W   QA  + D D VG+S D +G +LW YQ  T+
Sbjct:   56 AVGKLDSDGVLLWSWQEGTTGEDTMSDAAATDDGGVVVGGYSNGTLSGVVSEGLGDFIAIKFDSDGTEEWRWQEGTEKDEVISTCSKTADGNVVLTGLTQGDWEE--TNTGLWALVAVKLDVSDGSVIWRYQAG----VPSYSVVSRGAASRADGSIVIGGTTDGDW------DGELTGYADFFSVALDEDGSELWRFQDGSLFSISSAWGVAALSDGSVVLAGTTDGDYAGTNAGAQDFAVVKLTEEGVLDWTWQDGTLYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTT 363          
BLAST of mRNA_H-elongata_contig20422.5810.1 vs. uniprot
Match: D7FIH4_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH4_ECTSI)

HSP 1 Score: 257 bits (657), Expect = 6.800e-79
Identity = 147/320 (45.94%), Postives = 184/320 (57.50%), Query Frame = 1
Query:    4 AVAKLDADGSFLWAWVEGSEGSEYLLDAVAVADGGVVVAGVSSGTWNGVGSTRDVNFAAIKLDSDGEVVWRWQNGTSGSDEMRACVETTDGNVVLAGFTDHSWAEGIYNDGWNDAVAVKLSVDKGEMIWSYQVGEG*NYDDADAYVYDAVARADGSIVLCGQTFGSFTAGESFSGE-DGSSDFLAVAIDEDRNELWRWQDGPGVGMNAFMAAGAFEDGSVVLAGFTEGNWYGSNMGGCDFAAVKRDASGGEKWRIQFGTELDDSWKGAAVGSDD-SLVLTGYTYGSWIEDQAGGDFDQDFVGISWDAEGNILWAYQVRTS 957
            A  KLD+DG+ LW+W EG+   + L DA A  DGGVV AG  +GT NGV S    +F AIK DSDG   WRWQ+GT   + +  C +T DGNVVL G T   W E   N G    VAVKL V  G +IW YQ G              + +RADGSIV+ G T G +       GE  G +DF  VA+DED +ELWR+QDG  +  ++     A  DGSVVLAG T+GN+ G+N G  DFA VK    G   W  Q GT  D+S++G A G D  S+V  GYT+G+W   QA  + D D VG+S D +G +LW YQ  T+
Sbjct:    2 AAGKLDSDGAVLWSWQEGTTDEDALSDAAATDDGGVVFAGFFNGTLNGVASEGLGDFIAIKFDSDGTEEWRWQDGTEMDEGITTCSKTADGNVVLTGSTLGDWVE--TNTGLWALVAVKLDVTDGSVIWQYQAG----VPSQSVVSRGSASRADGSIVIGGVTDGDW------DGELTGFTDFFTVALDEDGSELWRFQDGSLLSSSSAWGVAALSDGSVVLAGTTDGNYAGTNAGAQDFAVVKLTEEGVLDWTWQDGTPYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTT 309          
BLAST of mRNA_H-elongata_contig20422.5810.1 vs. uniprot
Match: A0A6H5L7T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7T2_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 5.260e-77
Identity = 148/320 (46.25%), Postives = 184/320 (57.50%), Query Frame = 1
Query:    4 AVAKLDADGSFLWAWVEGSEGSEYLLDAVAVADGGVVVAGVSSGTWNGVGSTRDVNFAAIKLDSDGEVVWRWQNGTSGSDEMRACVETTDGNVVLAGFTDHSWAEGIYNDGWNDAVAVKLSVDKGEMIWSYQVGEG*NYDDADAYVYDAVARADGSIVLCGQTFGSFTAGESFSGE-DGSSDFLAVAIDEDRNELWRWQDGPGVGMNAFMAAGAFEDGSVVLAGFTEGNWYGSNMGGCDFAAVKRDASGGEKWRIQFGTELDDSWKGAAVGSDD-SLVLTGYTYGSWIEDQAGGDFDQDFVGISWDAEGNILWAYQVRTS 957
            A  KLD+DG+ LW W EGS   + L DA A  DGGVV AG  +GT NGV S    +F AIK DSDG   WRWQ+GT   + +  C +T DGNVVL G T   W E   N G    VAVKL V  G +IW YQ G              A +RADGSIV+ G T G +       GE  G +DF +VA++ED +ELWR+QDG    +++     A  DGSVVLAG T+G++  +N G  DFA VK    G   W  Q GT  DD ++GAA G D  S+V  GYTYG+W  +QA  + D D VG+S D +G +LW YQ  T+
Sbjct:   59 AAGKLDSDGAVLWYWQEGSTEDDTLADAAATDDGGVVFAGFYNGTLNGVPSEGLGDFFAIKFDSDGTEEWRWQDGTEKDEVILTCSKTADGNVVLTGMTQGDWVE--TNTGLWALVAVKLDVTDGSVIWQYQAG----VPSYSVVSRGAASRADGSIVIGGSTDGDW------DGELTGYADFFSVALNEDGSELWRFQDGSEFSISSAWGVAALSDGSVVLAGVTDGDYAETNAGEQDFALVKLTEEGVLDWTWQDGTPYDDGFEGAATGIDGTSMVFVGYTYGTWAAEQAEDEEDSDAVGMSMDGDGTLLWTYQAGTT 366          
BLAST of mRNA_H-elongata_contig20422.5810.1 vs. uniprot
Match: D7FXY5_ECTSI (von Willebrand factor type D domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY5_ECTSI)

HSP 1 Score: 172 bits (435), Expect = 7.720e-46
Identity = 119/331 (35.95%), Postives = 165/331 (49.85%), Query Frame = 1
Query:   31 SFLWAWVEGSEGSEYLLDAVAVA-DGGVVVAGVSSGTWNGVGSTRDVNFAAIKLDSDGEVVWRWQNGTSGSDEMRACVETTDGN--------------------VVLAGFTDHSWAEGIYNDGWNDAVAVKLSVDKGEMIWSYQVGEG*NYDDADAYVYDAVARADGS-IVLCGQTFGSFTAGESFSGEDGSSDFLAVAIDE-DRNELWRWQDGPGVGMNAFMAAGAFEDGSVVLAGFTEGNWYGSNMGGCDFAAVKRDASGGEKWRIQFGTELDDSWKGAAVGSDDSLVLTGYTYGSWIEDQAGGDFDQDFVGISWDAEGNILWAYQVRT 954
            + LW+W +G+ G++ L    AV  D   V+AG + G W    +  D +F A+K   DG   WR Q GT  +D        T                       ++LAGFT   W +G  + G +D VAV ++   G  +WS+Q G      + D  +   V R  GS +VL G+T G +   ++ +GE   +DF AV ++  D +E+WR+QDG   G +   +  A ED +VVLAG+TEG+  G N G  D A VK DA GG  WR Q GT   D    AAV  D S+V+ GYT GSW   +A    D D V +  D +GN LW +Q  T
Sbjct:    6 TLLWSWQDGTSGTDNLYGVAAVGGDDSFVLAGRTQGDWAET-NEGDFDFMAVKFAQDGTEQWRLQAGTPETDTFHDAAAVTSSPSTVANMAATGTSAAGDESTAIILAGFTKGGW-DGAASAGGSDFVAVSVASGDGSQLWSWQDGT-----EEDDVLMGVVERGGGSAVVLAGRTGGDWA--DANAGE--GTDFAAVKLEAGDGSEIWRFQDGSS-GDDTLKSVAAAEDDTVVLAGYTEGSLGGDNAGETDCAVVKLDADGGVLWRWQGGTAESDVCSAAAVAEDGSIVVAGYTVGSWGGSEANAGED-DLVVVKLDKDGNELWHWQEGT 323          
BLAST of mRNA_H-elongata_contig20422.5810.1 vs. uniprot
Match: D7G7A3_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A3_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 2.630e-45
Identity = 115/313 (36.74%), Postives = 159/313 (50.80%), Query Frame = 1
Query:    4 AVAKLDADGSFLWAWVEGSEGSEYLL---DAVAVADGGVVVAGVSSGTWNGVGSTRDVNFAAIKLDSDGEVVWRWQNGTSGSDEMRACVETTDGNVVLAGFTDHSWAEGIYNDGWNDAVAVKLSVDKGEMIWSYQVGEG*NYDDADAYVYDAVARADGSIVLCGQTFGSFTAGESFSGEDGSSDFLAVAID-EDRNELWRWQDGPGVGMNAFMAAGAFEDGSVVLAGFTEGNWYGSNMGGCDFAAVKRDASGGEKWRIQFGTELDDSWKGAA-----VGSDDSLVLTGYTYGSWIEDQAGGDFDQDFVGISWD 915
            A  KLD  G+ LW W  G+   E L+    A + +   VV+ G + G+W    +    +F A KLD+DG  +W WQ+GT   D  +A     DG+V LAG+T+  W +   N+G  D    KL  + G + W +Q G     +D +  +   V R DG + L G + G+F          GS  F+ V ID  D +ELWRWQ+G       F AA   +D SVV+ G++EG+W  +N GG DF A + DA+G E WR Q GT+  D W  AA     V      +L G T GSW  D  G   ++DFV +S D
Sbjct:  285 AAVKLDESGAVLWKWQSGTSDDELLVGITSANSASGSEVVLVGRTEGSW-AASNVGGYDFCAAKLDADGNELWSWQDGTDADDTTKAVAVDGDGSVFLAGYTEGDWNQP--NEGETDFAVTKLDAN-GTLAWRWQDGT----EDEEFGLMVVVGR-DGGVYLAGYSTGAFG-----GINKGSEGFVVVKIDGRDGSELWRWQNGTSAADKLFGAA-ILDDDSVVVTGYSEGDWAETNAGGSDFCAARLDANGSEMWRWQAGTDSSD-WITAATVSQVVAGAPRAILAGTTEGSWDGDNNG---EEDFVLVSLD 578          
BLAST of mRNA_H-elongata_contig20422.5810.1 vs. uniprot
Match: A0A6H5JZC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZC7_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 2.180e-39
Identity = 94/255 (36.86%), Postives = 130/255 (50.98%), Query Frame = 1
Query:   40 WAWVEGSEGSEYLLDAVAVADGGVVVAGVSSGTWNGVGSTRDVNFAAIKLDSDGEVVWRWQNGTSGSDEMRACVETTDGNVVLAGFTDHSWAEGIYNDGWNDAVAVKLSVDKGEMIWSYQVGEG*NYDDADAYVYDAVARADGSIVLCGQTFGSFTAGESFSGEDGSSDFLAVAIDEDRNELWRWQDGPGVGMNAFMAAGAFEDGSVVLAGFTEGNWYGSNMGGCDFAAVKRDASGGEKWRIQFGTEL---DDSW 795
            W W  G   +E +    A  +G +V  G + G +    S    +F A+K+  DG  +W WQ+GTS  D +   V  +DG+VVLAG T+  W  G  N G  D  AVKL  + G ++W +Q G   + D+    +  A + +   +VL G+T GS+ A  +     G  DF A  +D D NELW WQDG G   +   A     DGSV LAG+TEG+W   N G  DFA  K +A+G   WR Q   E    +D+W
Sbjct:    6 WRWQGGGPANENMKGVAAGGNGTIVAVGRTDGDFFPFASLGGFDFLAVKIGPDGLYLWHWQDGTSDEDNLNDAVVNSDGSVVLAGSTEGDW--GGTNAGLGDFAAVKLD-ESGAVLWKWQSGT--SDDELLVGITSANSASGSEVVLVGRTEGSWAASNA-----GGYDFCAAKLDADGNELWSWQDGTGAD-DTTKAVAVDGDGSVFLAGYTEGDWNQPNEGETDFAVTKLEANGTLAWRWQGWLEAANNEDNW 249          
BLAST of mRNA_H-elongata_contig20422.5810.1 vs. uniprot
Match: A0A6H5JF09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF09_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 1.170e-35
Identity = 105/283 (37.10%), Postives = 142/283 (50.18%), Query Frame = 1
Query:  178 AIKLDSDGEVVWRWQNGT------------SGSDEMRACVETTDGN--------VVLAGFTDHSWAEGIYNDGWNDAVAVKLSVDKGEMIWSYQVGEG*NYDDADAYVYDAVARADGS-IVLCGQTFGSFTAGESFSGEDGSSDFLAVAIDE-DRNELWRWQDGPGVGMNAFMAAGAFEDGSVVLAGFTEGNWYGSNMGGCDFAAVKRDASGGEKWRIQFGTELDDSWKGAAVGSDDSLVLTGYTYGSWIEDQAGGDFDQDFVGISWDAEGNILWAYQVRTSV 960
            A+K   DG   WR Q GT            SGS    A +  T  +        +VLAGFT   W  G  + G +D VAV L+   G  +WS+Q G      + D  +   V R  GS +VL G+T G +   ++ +GE   +DF AV ++  D +E+WR+QDG   G +   +  A ED +VVLAG+T+G+  G N G  D   VK DA GG  WR Q GT   D      V  D S+VL GYT GSW   +A    ++D V +  D +GN LW +Q  TS+
Sbjct:    2 AVKFAQDGTEQWRLQAGTPETDTFHDAAAASGSPSTVATMAATGTSAAGDESTAIVLAGFTKGGW-NGAASAGGSDFVAVSLASGDGSRLWSWQDGT-----EEDDVLVGLVERGGGSAVVLAGRTGGDWA--DANAGE--GTDFAAVKLEAGDGSEIWRFQDGSS-GDDTLKSVAAAEDDTVVLAGYTDGSLGGVNAGETDCTVVKLDADGGVLWRWQGGTAESDVCSATVVAEDGSIVLAGYTVGSWDGSEANAG-EEDLVVVKLDKDGNELWHWQEGTSL 272          
BLAST of mRNA_H-elongata_contig20422.5810.1 vs. uniprot
Match: D8LHV1_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV1_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 2.840e-34
Identity = 101/263 (38.40%), Postives = 142/263 (53.99%), Query Frame = 1
Query:   88 VAVADGGVVVA--GVSSGTWNGVGSTRDVNFAAIKLDSDGEVVWRWQNGTSGSDEMRACVETTD-GNVVLAGFTDHSWAEGIYNDGWNDAVAVKLSVDKGEMIWSYQVGEG*NYDDADAYVYDAVARADGSIVLCGQTFGSFTAGESFSGEDGSSDFLAVAIDEDRNELWRWQDGPGVGMNAFMAAGAFEDGSVVLAGFTEGNWYGSN--MGGCDFAAVKRDASGGEKWRIQFGTELDDSW-KGAAVGSDDSLVLTGYTYGSW 858
            VA +D G VVA   ++ G W    S    +F A K+D DG ++W+WQ+GT G D + A V   + G+V++AG T   ++    + G  D VA+KL    G  +W++Q G   + D+  A    A A  DG +VL G TFG ++ G   +GE+   DF AV +D +  E+WRWQ G  V  N   A    EDG+V+LAG T G+   S+  +G  D A V   A G E WR + G+  DD   +G A GSD  +V+ G   GSW
Sbjct:  105 VAASDSGSVVAVGTINDGEW-ATPSVGGYDFIAYKVDGDGNLLWKWQDGTIGFDILWAVVSADEEGSVIMAGMTSLDFSGP--SVGSLDFVAIKLDSG-GTTLWTWQDGTS-SSDEIQA----AAATGDGFVVLAGYTFGEWSGG--LTGEE--CDFAAVKLDANGTEVWRWQGGYEVEYNVIYAVSVQEDGTVLLAGRTGGSQVMSDKRVGSSDIATVMLGADGQEIWRWKQGSSSDDFMLRGMAAGSDGRMVMVGSINGSW 354          
BLAST of mRNA_H-elongata_contig20422.5810.1 vs. uniprot
Match: A0A1Q9F4G3_SYMMI (Calmodulin n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9F4G3_SYMMI)

HSP 1 Score: 142 bits (358), Expect = 5.780e-34
Identity = 102/321 (31.78%), Postives = 160/321 (49.84%), Query Frame = 1
Query:    1 FAVAKLDADGSFLWAWVEGSEGSEYLLDAVAVADGGVVVAGVSSGTWNGVGSTRDVNFAAIKLDSDGEVVWRWQNGTSGSDEMRACVETTDGNVVLAGFTDHSWAEGIYNDGWNDAVAVKLSVDKGEMIWSYQVGEG*NYDDADAYVYDAV-ARADGSIVLCGQTFGSFTAGESFSGEDGSSDFLAVAIDEDRNELWRWQDGPGVGMNAFMAAGAFEDGSVVLAGFTEGNWYG-SNMGGCDFAAVKRDASGGEKWRIQFGTELDDSWKGAAVGSDDSLVLTGYTYGSWIEDQAGGDFDQDFVGISWDAEGNILWAYQVRTS 957
            F V KL   G+  W +  G+ G++Y   A   + G +V+AG S+G++ G  +  D +   IKL + G + W +Q GTS  D +RA    + GNVV AG +  S+ EG  N G  D V +KL+   G + W  Q G    + D    V DAV   + G IV+ G + GSF   E ++   G  D + + ++   +  W WQ G   G +          GS+VLAG + G++ G +N G  D   +K ++SG  +W  Q GT   D+ +   V S  ++V+ G +        + GD+D   V +  +++G +LW +Q  TS
Sbjct:  801 FVVMKLSGAGTLQWIFQTGTTGTDYAEAAHVDSSGNIVLAGHSTGSFEGHANAGDYDMVVIKLSNSGTLQWIFQTGTSAVDNLRAVQVESSGNVVAAGHSTGSF-EGYTNAGVWDVVVMKLNS-SGALQWILQTGS--TWTD----VSDAVQVESSGDIVVAGHSSGSF---EGYT-TAGGYDMVVMKLNSSGDLQWLWQTGTS-GTDFVRDVQVESTGSIVLAGHSTGSFEGYTNAGDYDMVVMKLNSSGALQWTFQIGTSATDNLQAVHVESSGNIVVAGQSEEGLQGQISKGDYDM--VIMELNSQGTLLWLFQTGTS 1106          
BLAST of mRNA_H-elongata_contig20422.5810.1 vs. uniprot
Match: A0A6H5LJ25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJ25_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 1.080e-27
Identity = 102/291 (35.05%), Postives = 136/291 (46.74%), Query Frame = 1
Query:    1 FAVAKLDADGSFLWAWVEGSEGSEYLLDAVAV-ADGGVVVAGVSSGTWNGVGSTRDVNFAAIKLDSDGEVVWRWQNGTSGSDEMRACVETTDGNVVLAGFTDHSWAEGIYND---GWNDAVAVKLSVDKGEMIWSYQVGEG*NYDDADAYVYDAVARADGSIVLCGQTFGSFTAGESFSGEDGS--SDFLAVAIDEDRNELWRWQDGPGVGMNAFMAAGAFEDGSVVLAGFTEGNWYGSNMGGCDFAAVKRDASGGEKWRIQFGTELDDSWKGAAVGSDDSLVLTGYTYGS 855
            F V KL  DG  LW W +    +  L +A+AV   GGV+V G++   ++  G+    +FAA KLDS G V WRWQ  T G D + + +   +G+ VL G T      G +N    G  D VAVKL  D G  +W +Q G        D +V   V   DGS VL G T+GS+++  +    DGS   DF AV +  D  E+WRWQDG     +    A    DGSVVL+G + G       G                     GTE+D S      G +  +VL G+T  S
Sbjct:  124 FEVIKLSGDGGQLWQWKDDDTNASRLAEAIAVDQQGGVLVGGLA---FDDAGT----DFAACKLDSSGNVTWRWQATTDGLDAVSS-IAPANGSFVLGGRTT-----GDFNGTSAGGTDFVAVKLD-DSGTEVWRWQDGTA-----EDDFVEAVVHSDDGSAVLAGHTYGSWSSDNA----DGSFSKDFAAVMLSSDGKEIWRWQDGT-TEDDTLEGAAIQGDGSVVLSGNSGG-------GXXXXXXXXXXXXXXXXXXXSQGTEVD-SVSSCGSGYNGRMVLAGFTIAS 382          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20422.5810.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIH5_ECTSI1.030e-7946.25Hemolysin-type calcium-binding region n=1 Tax=Ecto... [more]
D7FIH4_ECTSI6.800e-7945.94Hemolysin-type calcium-binding region n=1 Tax=Ecto... [more]
A0A6H5L7T2_9PHAE5.260e-7746.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXY5_ECTSI7.720e-4635.95von Willebrand factor type D domain protein n=1 Ta... [more]
D7G7A3_ECTSI2.630e-4536.74Hemolysin-type calcium-binding region n=1 Tax=Ecto... [more]
A0A6H5JZC7_9PHAE2.180e-3936.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF09_9PHAE1.170e-3537.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHV1_ECTSI2.840e-3438.40Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A1Q9F4G3_SYMMI5.780e-3431.78Calmodulin n=2 Tax=Symbiodinium microadriaticum Ta... [more]
A0A6H5LJ25_9PHAE1.080e-2735.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20422contigH-elongata_contig20422:3912..6673 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score84.7
Seed ortholog evalue3.1e-14
Seed eggNOG ortholog2880.D8LRF5
Preferred nameRIPK4
KEGG koko:K02861,ko:K08846,ko:K08847,ko:K08848,ko:K16289
KEGG Pathwayko04064,ko04210,ko04217,ko04620,ko04621,ko04622,ko04623,ko04668,ko04722,ko05131,ko05152,ko05160,ko05169,map04064,map04210,map04217,map04620,map04621,map04622,map04623,map04668,map04722,map05131,map05152,map05160,map05169
GOsGO:0002009,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0008150,GO:0009653,GO:0009888,GO:0009889,GO:0010468,GO:0010556,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032502,GO:0044093,GO:0044424,GO:0044464,GO:0048518,GO:0048729,GO:0048856,GO:0050789,GO:0050794,GO:0051090,GO:0051091,GO:0051092,GO:0051171,GO:0051252,GO:0060255,GO:0060429,GO:0065007,GO:0065009,GO:0080090,GO:1903506,GO:2000112,GO:2001141
EggNOG free text desc.protein kinase activity
EggNOG OGsCOG0515@1,KOG0192@2759
EC2.7.11.1
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Hectar predicted targeting categoryother localisation
Exons6
Model size969
Cds size354
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930146.2218215-UTR-H-elongata_contig20422:3911..39621622930146.2218215-UTR-H-elongata_contig20422:3911..3962Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20422 3912..3962 +
1691679298.75542-UTR-H-elongata_contig20422:3911..39621691679298.75542-UTR-H-elongata_contig20422:3911..3962Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20422 3912..3962 +
1622930146.2376816-UTR-H-elongata_contig20422:4218..43891622930146.2376816-UTR-H-elongata_contig20422:4218..4389Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20422 4219..4389 +
1691679298.766939-UTR-H-elongata_contig20422:4218..43891691679298.766939-UTR-H-elongata_contig20422:4218..4389Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20422 4219..4389 +
1622930146.2660675-UTR-H-elongata_contig20422:4815..50051622930146.2660675-UTR-H-elongata_contig20422:4815..5005Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20422 4816..5005 +
1691679298.775842-UTR-H-elongata_contig20422:4815..50051691679298.775842-UTR-H-elongata_contig20422:4815..5005Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20422 4816..5005 +
1622930146.2795427-UTR-H-elongata_contig20422:5340..55251622930146.2795427-UTR-H-elongata_contig20422:5340..5525Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20422 5341..5525 +
1691679298.7843566-UTR-H-elongata_contig20422:5340..55251691679298.7843566-UTR-H-elongata_contig20422:5340..5525Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20422 5341..5525 +
1622930146.3095188-UTR-H-elongata_contig20422:5775..57931622930146.3095188-UTR-H-elongata_contig20422:5775..5793Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20422 5776..5793 +
1691679298.7947478-UTR-H-elongata_contig20422:5775..57931691679298.7947478-UTR-H-elongata_contig20422:5775..5793Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20422 5776..5793 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930146.345602-CDS-H-elongata_contig20422:5793..59461622930146.345602-CDS-H-elongata_contig20422:5793..5946Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20422 5794..5946 +
1691679298.8024642-CDS-H-elongata_contig20422:5793..59461691679298.8024642-CDS-H-elongata_contig20422:5793..5946Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20422 5794..5946 +
1622930146.360746-CDS-H-elongata_contig20422:6472..66731622930146.360746-CDS-H-elongata_contig20422:6472..6673Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20422 6473..6673 +
1691679298.809886-CDS-H-elongata_contig20422:6472..66731691679298.809886-CDS-H-elongata_contig20422:6472..6673Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20422 6473..6673 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20422.5810.1prot_H-elongata_contig20422.5810.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig20422 5794..6673 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig20422.5810.1

>prot_H-elongata_contig20422.5810.1 ID=prot_H-elongata_contig20422.5810.1|Name=mRNA_H-elongata_contig20422.5810.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=118bp
MNAFMAAGAFEDGSVVLAGFTEGNWYGSNMGGCDFAAVKRDASGGEKWRI
QFGTELDDSWKGAAVGSDDSLVLTGYTYGSWIEDQAGGDFDQDFVGISWD
AEGNILWAYQVRTSVIQ*
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mRNA from alignment at H-elongata_contig20422:3912..6673+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig20422.5810.1 ID=mRNA_H-elongata_contig20422.5810.1|Name=mRNA_H-elongata_contig20422.5810.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2762bp|location=Sequence derived from alignment at H-elongata_contig20422:3912..6673+ (Himanthalia elongata Himel1 dioecious)
TTTGCTGTGGCCAAACTTGACGCCGACGGGAGCTTTCTCTGGGCTTGGGT GGTAAGTAGCATGTACAGCATGATGTACAGCAAGACGTGCTCTCTCCCTA GCAAGCATGATATCTCCCAAGGCGGCAAGACGCGATAAAATTCGGCGTCG TTAAAAATATACTTCGGAGTTTCGCGCCGTCGATACTTGAGGACAGAGCT ACTCGTTTTACTGATTCCCTGGAGACGCCCGGACGTCAGCGCTCTGCAAT ATGGCCTTGACAAAGTTCATCAAAACTCTTGCATTATCCCGGTGATTCGT ACTGCAGGAAGGGTCTGAAGGGTCGGAGTATTTATTGGATGCCGTGGCGG TGGCCGACGGAGGCGTTGTTGTGGCCGGCGTGTCCAGCGGAACGTGGAAC GGAGTAGGGTCGACCAGGGATGTCAATTTCGCTGCTATCAAGCTCGACTC GGACGGTGAAGTTGTCTGGCGGTGGCAGGTGAATTAAAAGTGCTTCAATT TACGCTCAAATTAAAGCAGAAGTAGCCAGAAAATAATCAGTGACAGGTTT TATATAGCCAGCGGCCGATTTACAGTACAATGCAGTACCAAGCACTACTC ATACCATTAAGCACAAAATCAAAGAAATTTATATTTTCTCACAGCATAAA AGATGGAATTGGCATTGACCAGTGGTCGGCTATTCGAAAAACACGTCCCT CGACTATTAGGAAAATTCCTTGCATCTAGGTAGTCCTCATGTCAGTCGTC TCAGTTATAGAGCAAGAATGAGGTAATGCATTGAGATTCAGAAAAATGCA CGATGCTAGTGTCTCTCAGTCAACCAGAAGATATTCGAATGGCACAACGT GAGAGATCCGCCCAACACATAATCAAATGAACAAAATGATACCGTCTACG TCAGAATGGAACAAGCGGGTCAGACGAGATGCGGGCGTGTGTAGAAACTA CAGATGGAAACGTGGTCCTGGCGGGGTTCACCGACCATTCGTGGGCGGAG GGTATCTACAACGACGGCTGGAATGACGCTGTCGCAGTGAAGCTCTCTGT AGATAAGGGGGAAATGATTTGGAGCTATCAGGTAGGCGAGGGCTGTGCCA TTTCTTAGTCCGTTTCAAAATCGTCGATTCGTGAACGGTATCCACAAATG CTTGCGTATACCTTACCCCGTGTGCGCCCCGGTCGTCGCATTCACTCGAC TTCGTTAAGACCATTCGTGTGACCTCCCTCTAGCAAGCAAAGCTCAGAAA ACGCCAGAACCCCGGCCCCCGAAAACGTTGGCGTATATAAAAAGACAGAG AAAACAAGTATTATAATGTTATGTTCCTGGCGAGGACAGTCGTACAAAAT GTTATGCCCCTTCTATCTTCTTCTTGACATCGTACAAAATCCTCGCCAAC TCGCCCTTTGAACGATGAATTCCAGACAGAAAATTACGATGACGCGGACG CCTATGTGTACGATGCTGTCGCCAGAGCGGATGGTTCGATTGTGTTGTGC GGCCAAACGTTCGGATCCTTCACTGCTGGTGAATCCTTCTCGGGAGAGGA TGGCTCGTCTGACTTTCTCGCCGTTGCAATCGATGAAGACAGAAACGAGC TGTGGCGCTGGCAGGTGTGGACAATGGCAGTCGCCCAGCGCCGGGTACGT TATACTTTTAGACGGGACCTTGAATAGTCACTGAAAACAATCTATTATTT GTACAATCCACGGACTAGACTTGTCTGACGTTGTAGGGATGAAGAGTCAA GACGCTGTAGAGTATATTGTTATGGTTTCGAGTAGAGGCGTATTAAGCCA GCTCTCAAGCTACGTCACGTGCGAATTTGGTGCACATTTACCTGAACCCC ATCGCCTTACGCAGGACGGACCTGGAGTTGGTATGAACGCTTTCATGGCT GCGGGTGCTTTCGAAGACGGCTCTGTTGTACTTGCTGGATTTACCGAGGG AAATTGGTATGGGTCGAATATGGGGGGATGTGACTTCGCGGCGGTTAAGC GGGATGCCTCTGGGGGAGAAAAATGGCGTATACAGGTGATTTTCTGGTAA AGCTCCGGCAGGTCCCATCGGAAAAAGTAATCAACGTTGGACGCGCCCCC GATTAGGCGTGACACTTCCTAGTCGATAGTTCTGTCAGCAGTCAAGTCGT CGATTATTGCTCACGCTCACTGCATCTCAGTCATCTCTACATTGACATAT CGATTATATCAAATACACCATCGACATAGCGTTTAAGAATCAGACCAAGG CAACGTGCTACTTTCGACCGCATGGCCTCATGATGCCAGGTAATTTCACT AGGAAGGTAACACTTCGCTGTAGATAGGATACATCTTATAAGCCCTTTGG CAACGCTCCCGGTCTGATCTCTCAAGCGATAGCTATGAACATCGAACGCA TGCTCTTCAAACTGAAAGATGCCTCTATCTCACGAAGGCAGCGGGTCGCT AATAAATTACACCCGCGATGCTACTCTCTGTAATAGAAACTGCCGTGACG CATTCCAGTTGGGGAAGAGTCGGTGACATCAATATTTCTTTCGCCGTGCG TTCCTGGACAGTTTGGCACAGAGCTTGATGATAGTTGGAAGGGGGCAGCT GTTGGCTCCGACGACTCGCTCGTACTAACGGGATACACGTACGGGAGCTG GATAGAGGATCAGGCGGGTGGTGATTTTGACCAAGATTTTGTCGGAATAT CTTGGGACGCAGAAGGCAACATACTGTGGGCATACCAGGTGAGAACATCC GTGATACAGTAG
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Coding sequence (CDS) from alignment at H-elongata_contig20422:3912..6673+

>mRNA_H-elongata_contig20422.5810.1 ID=mRNA_H-elongata_contig20422.5810.1|Name=mRNA_H-elongata_contig20422.5810.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=708bp|location=Sequence derived from alignment at H-elongata_contig20422:3912..6673+ (Himanthalia elongata Himel1 dioecious)
ATGAACGCTTTCATGGCTGCGGGTGCTTTCGAAGACGGCTCTGTTGTACT
TGCTGGATTTACCGAGGGAAATTGGTATGGGTCGAATATGGGGGGATGTG
ACTTCGCGGCGGTTAAGCGGGATGCCTCTGGGGGAGAAAAATGGCGTATA
CAGATGAACGCTTTCATGGCTGCGGGTGCTTTCGAAGACGGCTCTGTTGT
ACTTGCTGGATTTACCGAGGGAAATTGGTATGGGTCGAATATGGGGGGAT
GTGACTTCGCGGCGGTTAAGCGGGATGCCTCTGGGGGAGAAAAATGGCGT
ATACAGTTTGGCACAGAGCTTGATGATAGTTGGAAGGGGGCAGCTGTTGG
CTCCGACGACTCGCTCGTACTAACGGGATACACGTACGGGAGCTGGATAG
AGGATCAGGCGGGTGGTGATTTTGACCAAGATTTTGTCGGAATATCTTGG
GACGCAGAAGGCAACATACTGTGGGCATACCAGGTGAGAACATCCGTGAT
ACAGTAGTTTGGCACAGAGCTTGATGATAGTTGGAAGGGGGCAGCTGTTG
GCTCCGACGACTCGCTCGTACTAACGGGATACACGTACGGGAGCTGGATA
GAGGATCAGGCGGGTGGTGATTTTGACCAAGATTTTGTCGGAATATCTTG
GGACGCAGAAGGCAACATACTGTGGGCATACCAGGTGAGAACATCCGTGA
TACAGTAG
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