mRNA_H-elongata_contig20386.5801.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig20386.5801.1 vs. uniprot
Match: D8LES3_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LES3_ECTSI) HSP 1 Score: 853 bits (2205), Expect = 1.690e-291 Identity = 491/817 (60.10%), Postives = 546/817 (66.83%), Query Frame = 1
Query: 943 DEDGGLPSTVHPNSVRPKRVDMDGEATKAMDILTSLF------------VDGDATGRENIRSVKNRGDNSKKSAKSAKGNGAT-----TEEAVFTSPLASSATHEVFLGNKKDDDHSMTFETLGGDDSQEERTRPRTTPGGGWDSIGGAVTRRNRGKV---------HVSGKDVLSGGVPPPEHHARPRELSRRAAAKPLRSIRSVHIMAGGPGATFTALGIPTKMLHHLEGSKGDSVGGGGMGLSGPTVCQVAAIPVLLAGHNAVIKSETGSGKTLAFLLPMLCDLAALEPRVEREKGTFAIVLAPTRELSAQILEVLSRVVRPFIWLVPGSVSGGERRKSEKARLRKGVTILVCTPGRLLDHLKATKCFRRDLLRWLVLDEADRLLDMGFEKQVKEIIELLDQSARAVR----------------------------------------------YMRVDADKNLVEFVDESGSVKLVSGTR--EAPKAKAGSAGHHSADSSAKGEG-NSAAPTEVFSTPRQLVQYYMTVTQKLRLPALCAFLRARAREKVVVFMSTCDAVDFHHDMF-------------------------------------------------PDREFFGTGCLVERLHGNVPQGERQATYRAFSASTSGVLICTDVAARGLDLPTVDWIVQYDPPAETADYVHRVGRTARRGERGHSLLFLLPRETSYLGVLEARGLRPKPLSLEGVLCAADAGKRDARRADEQL----------LVAGDKTLLGRARAAFQSHVRAYAARAPDSRAVFQVRSLHLGHVARSFALKDPPT 2991
D+DGGLPS VHPNSVR K VDMDGEA+KAM+IL +L + +S K D K+ G GA+ T+ AV + + + S+ ET D + + G ++ +R+NR ++ G VP PEHHARPRELSRRAA +PL S RS H+MA GPGATF AL +P KM+ HLE KG+ +GGGGMGL+GPTVCQ+AA+PVL AG+N VIKSETGSGKTLA+LLPMLCDLA++EPRV+REKGT AIVLAPTREL +QILEVL+RVVRPFIWLVPGS+SGGERRKSEKARLRKGVT+LVCTPGRLLDHLK TKCFRRD LRWL+LDEADRLLDMGFEKQVKEI+ELLDQSARAVR ++RVDAD N+VE VDE+G VK +SG R + K K G H EG + +A TE FSTPRQLVQYYMTVTQKLRLPALCAFLRARA EKVVVFMSTCDAVDFHHD+F PD EFFG GCLV RLHGNVPQ ERQATYRAF A+ SG+LICTDVAARGLDLPTVDWIVQYDPPAETADYVHRVGRTAR+GERGHSLLFLLPRE +YLGVLEARGLRPKPLSLEGVLCAADAGKRDARRADEQL LVAGDK LL RAR+AFQSHVRAYAARAPDSRAVFQVRSLHLGHVARSFALKDPPT
Sbjct: 344 DKDGGLPSDVHPNSVRTKAVDMDGEASKAMEILGALLGKNGXXXXXXXXXXXXXXXKNGGKSKKKARDTPKEGTLEGDGGGASGSVGKTDVAVQRQAMDVDSAGPADIEQPPSAGTSLE-ETGSNADDESPTAETKLAGSSGAEATVALASRKNRARIAXXXXXXXXXXXXXXAAGGTVPLPEHHARPRELSRRAAVRPLASARSAHVMAAGPGATFAALKLPPKMVSHLEEPKGN-LGGGGMGLAGPTVCQLAAVPVLAAGNNTVIKSETGSGKTLAYLLPMLCDLASVEPRVDREKGTLAIVLAPTRELGSQILEVLTRVVRPFIWLVPGSLSGGERRKSEKARLRKGVTVLVCTPGRLLDHLKTTKCFRRDSLRWLILDEADRLLDMGFEKQVKEIVELLDQSARAVRSGPAGGSRVQGGAVVPSTKVIRRQTVMVSATLDKGVSRLSAALLSKHIRVDADTNVVESVDEAGKVKHISGERGTSSSKTKTGRNEVHGGGDGLPSEGTDGSANTEEFSTPRQLVQYYMTVTQKLRLPALCAFLRARAAEKVVVFMSTCDAVDFHHDLFRRAGWPGDSPSPSPDGGEGSPNEAGRSSGGSAEDNGKKKTAATAGKKPLPDGEFFGPGCLVRRLHGNVPQNERQATYRAFGAAKSGILICTDVAARGLDLPTVDWIVQYDPPAETADYVHRVGRTARKGERGHSLLFLLPREVAYLGVLEARGLRPKPLSLEGVLCAADAGKRDARRADEQLAYELQQGLQLLVAGDKPLLDRARSAFQSHVRAYAARAPDSRAVFQVRSLHLGHVARSFALKDPPT 1158
BLAST of mRNA_H-elongata_contig20386.5801.1 vs. uniprot
Match: A0A835Z9X5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9X5_9STRA) HSP 1 Score: 460 bits (1183), Expect = 6.010e-142 Identity = 315/728 (43.27%), Postives = 375/728 (51.51%), Query Frame = 1
Query: 1435 LSRRAAAKPLRSIRSVHIMAGGPGA------TFTALGIPTKMLHHLEGSKGDSVGGGGMGLSGPTVCQVAAIPVLL-----------AGHNAVIKSETGSGKTLAFLLPMLCDLAALEPRVEREKGTFAIVLAPTRELSAQILEVLSRVVRPFIWLVPGSVSGGERRKSEKARLRKGVTILVCTPGRLLDHLKATKCFRRDLLRWLVLDEADRLLDMGFEKQVKEIIELLDQSARAVR--------------------------------------YMRVDADKNLVEFVDESGSVKLVSGTREAPKAKAGSAGHHSADSSAKGEGNSAAPTEVFSTPRQ---------------LVQYYMTVTQKLRLPALCAFLRARAREKVVVFMSTCDAVDFHHDMF-----PD--------------REF------------------------FGTGCLV-----------------------------ER---LHGNVPQGERQATYRAFSASTSGVLICTDVAARGLDLPTVDWIVQYDPPAETA------------------------------------------DYVHRVGRTARRGERGHSLLFLLPRET--------SYLGVLEARGLRPKPLSLEGVL--CAADAGKRDARRADE----------QLLVAGDKT---LLGRARAAFQSHVRAYAARAPDSRAVFQVRSLHLGHVARSFALKDPP 2988
+SR AA P S H+ A TF ALG+ ++ H E + G + G+GL PT+CQ AA+P LL G N ++KSETGSGKTLA+LLP++ DLA PRV R+ GT AI+LAPTRELS QI +VL+R ++PFIWLVPG VSGGERRKSEKARLR+GV +LV TPGRLLDHL+AT+ FRR LRWLVLDEADRL+D+GFEKQ+ +I++LLD ++ VDAD + VD SG+ V P+ AG ADSSA + ++A T LVQ YM VTQKLRLPALCAFLR R +KV+VFMSTCD+VDFHH +F PD EF FG G V ER LHGNVPQ ER YR F ++GVL+CTDVAARGLDLPTVDWIVQYDPP ET DYVHRVGRTAR+G+RG +LLFL+P ET YL VLE+ GLRP+ LSL+ L CA + R R DE Q LV G+ LL +ARAAFQSHVRAYA + D++ FQVR+LHLGHVARSFALKD P
Sbjct: 255 VSRGAAPAPRAPRASSHLFLAPTDAEDSAPPTFGALGLSQRLCAHAESASG-AERHAGLGLRRPTLCQRAAVPPLLQAVAACAVALGCGRNVMLKSETGSGKTLAYLLPLIDDLAHRTPRVTRDDGTLAIILAPTRELSVQIHDVLARALQPFIWLVPGLVSGGERRKSEKARLRRGVAVLVSTPGRLLDHLRATRAFRRGALRWLVLDEADRLMDLGFEKQISDIVDLLDGKPATANAKTPTRKPTPAPLKRQTVMVSATVTASVSKMGQRLLGAHLHVDADTGTAKEVDASGAAAPV------PRV----AGAEPADSSAPAQASAAFQTXXXXXXXXXXXXXXXXXXXXXXXLVQQYMVVTQKLRLPALCAFLRQRRNKKVIVFMSTCDSVDFHHALFAAAAWPDGVAPVPKVAGVSASSEFNSGLGRRTETLPDDAPAAKKTDGLFGQGFPVYSAHEAALTLRAARHWHAQASRQRASAEAERVAALHGNVPQAERIVAYRGFGQCSAGVLLCTDVAARGLDLPTVDWIVQYDPPVETRRRSAXXXXXXXXXXXXXXXXXXXXXXXXSSIDRKAEASVAPRDYVHRVGRTARKGQRGSALLFLMPSETLXXXXXXXDYLKVLESHGLRPQALSLQAALRACAEERHSR-TRNPDEEVAYELQQGLQALVEGEGARGELLKKARAAFQSHVRAYATHSADTKQAFQVRALHLGHVARSFALKDAP 970
BLAST of mRNA_H-elongata_contig20386.5801.1 vs. uniprot
Match: A0A662WVI5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WVI5_9STRA) HSP 1 Score: 437 bits (1124), Expect = 6.930e-136 Identity = 260/584 (44.52%), Postives = 350/584 (59.93%), Query Frame = 1
Query: 1411 EHHARPRELSRRAAAKPLRSIRSVHIMAGGPGATFTALGIPTKMLHHLEGSKGDSVGGGGMGLSGPTVCQVAAIPVLLAGHNAVIKSETGSGKTLAFLLPMLCDLAALEPRVEREKGTFAIVLAPTRELSAQILEVLSRVVRPFIWLVPGSVSGGERRKSEKARLRKGVTILVCTPGRLLDHLKATKCFRRDLLRWLVLDEADRLLDMGFEKQVKEIIELLDQSARAVRYMRVDADKNLVEFVDESGSVKLVSGTR-EAPKAKAGSAGHHSADSSAKGEGNSAAPTEVFSTPRQLVQYYMTVTQKLRLPALCAFLRARARE--------------------KVVVFMSTCDAVDFHHDMFPD---------------------REFFGTGCLVERLHGNVPQGERQATYRAFSASTSGVLICTDVAARGLDLPTVDWIVQYDPPAETADYVHRVGRTARRGERGHSLLFLLPRETSYLGVLEARGLRPKPLSLEGVLC--------AADAGKR--------DARRADEQLLVAGDKTLLGRARAAFQSHVRAYAARAPDSRAVFQVRSLHLGHVARSFALKDPP 2988
E +PR + +KP+ S S I A +F ++ + K++ L+ GG G + PT QV IP +LAG++ ++KSETGSGKTLA+LLP++ L A+ PRV+R G A+VLAPTREL QILE +++++PF++LVPG++ GGE++K+EKARLRKG+TILV TPGRL DHL T+ F L++LVLDEADRLLDMGFEKQ+ +I+ +LD + +A + + + V + + L +A +G+AG ++ + AK G E FSTP QL+Q++M V K RL AL FLR R K+VVF+STCDAVDFH+ +F FG+ V RLHGN+PQ ER +T++ F +S++GVL+CTDVAARGL+LPTV WIVQYDPP ET DYVHRVGRTAR G++G SLLFL+P E+ YL L + L LSLE + A ++ K+ D + EQ L+A DK L A AF S VR+YA + D+R +F VRSLH GHVA+SFAL+DPP
Sbjct: 177 EKFTQPRVKIDKVLSKPMASSTSEKIFAAD---SFKSMHMAEKLVQVLQ----KDAASGGFGFARPTTVQVQTIPSVLAGNDILVKSETGSGKTLAYLLPIVQKLQAMAPRVQRHDGCMALVLAPTRELCTQILETATKLIQPFVFLVPGAIIGGEKKKAEKARLRKGITILVATPGRLADHLVNTQSFNYARLQFLVLDEADRLLDMGFEKQITQILSILDGNKKAQKRQNILVSATINSGVQQLAKMSLSKPVLIDADAVTSGAAGAEASAAEAKASGQ-----ETFSTPHQLMQHFMIVPAKARLCALTCFLREELRYAIPQQSNGKDTPVVAGPGKCKIVVFLSTCDAVDFHYALFRKCAWPQGKGTTEETASSGDNGVASLFGSQGAVFRLHGNIPQQERVSTFKNFCSSSTGVLLCTDVAARGLNLPTVKWIVQYDPPTETRDYVHRVGRTARSGKQGSSLLFLMPSESEYLDYLSKQNLTLNALSLEKTIARVGKHGGFAGNSRKKLLHEVIQSDLQFLYEQTLLA-DKELFELACQAFHSFVRSYATHSSDTRQIFHVRSLHFGHVAKSFALRDPP 747
BLAST of mRNA_H-elongata_contig20386.5801.1 vs. uniprot
Match: H3GMA5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GMA5_PHYRM) HSP 1 Score: 434 bits (1117), Expect = 2.880e-135 Identity = 268/566 (47.35%), Postives = 344/566 (60.78%), Query Frame = 1
Query: 1453 AKPLRSIRSVHIMAGGPGATFTALGIPTKMLHHLEGSKGDSVGGGGMGLSGPTVCQVAAIPVLLAGHNAVIKSETGSGKTLAFLLPMLCDLAALEPRVEREKGTFAIVLAPTRELSAQILEVLSRVVRPFIWLVPGSVSGGERRKSEKARLRKGVTILVCTPGRLLDHLKATKCFRRDLLRWLVLDEADRLLDMGFEKQVKEIIELLDQSARAVRYMRVDADKNLVEFVDESGSVKLVSGTREAPKAKAGSAGHHSADSSAKGEGNSAAP-TEVFSTPRQLVQYYMTVTQKLRLPALCAFLRARARE--------------KVVVFMSTCDAVDFHHDMF------------PDRE---------FFGTGCLVERLHGNVPQGERQATYRAFSASTSGVLICTDVAARGLDLPTVDWIVQYDPPAETADYVHRVGRTARRGERGHSLLFLLPRETSYLGVLEARGLRPKPLSLEGVLCAADAGKR------------------DARRADEQLLVAGDKTLLGRARAAFQSHVRAYAARAPDSRAVFQVRSLHLGHVARSFALKDPP 2988
+KPL S S I A TF ++G+ K++ L K DS GGG G + PT QV IP +L G++ +IKSETGSGKTL++LLP++ L A+ PR++R+ G A+VLAPTREL QILE +++++PF++LVPG++ GGE++K+EKARLRKG+TILV TPGRL DHL T+ F L++LVLDEADRLLDMGFEKQ+ +I+ +LD A + + LV SG +L + P A SS +G + P T+ FSTP QL+Q++M V K RL AL FLR R K+VVF+STCDAVDFH +F D E FG V RLHGN+PQ ER T+++F +S++GVL+CTDVAARGL+LPTV WIVQYDPP ET DYVHRVGRTAR G +G SLLFL+P E+ YL L +GL+ LSLE + A GK D + EQ L+A DK L A AF S VR+YA + D+R +F VRSLH GHVA+SFAL+DPP
Sbjct: 168 SKPLASSSSEKIFAAN---TFESMGMVEKLVSVL---KKDSEGGG-FGFARPTTVQVQTIPSVLKGNDILIKSETGSGKTLSYLLPIVQKLQAVSPRIQRQDGCMALVLAPTRELCTQILETANKLIQPFVFLVPGAIIGGEKKKAEKARLRKGITILVATPGRLADHLANTQSFNYSRLQFLVLDEADRLLDMGFEKQITQILTILDGKKTAQKRQNI-----LVSATVNSGVQQLAKMSLLKPVLI-----DADAISSCEGAASETKPKTQEFSTPHQLMQHFMLVPPKARLCALTCFLREELRYAPQKDKKGTGPGKCKIVVFLSTCDAVDFHFALFRKCAWPSAKGSSDDAESSGDNGVASLFGNEGPVFRLHGNIPQKERVTTFKSFCSSSAGVLLCTDVAARGLNLPTVKWIVQYDPPTETRDYVHRVGRTARSGNQGSSLLFLMPSESEYLNYLSKQGLKLNALSLEKTV--ARVGKHGGFMTNSRKKLLHEVVQGDLQFLYEQTLMA-DKELFELACQAFHSFVRSYATHSSDTRNIFHVRSLHFGHVAKSFALRDPP 713
BLAST of mRNA_H-elongata_contig20386.5801.1 vs. uniprot
Match: A0A0P1A9W4_PLAHL (Dead deah box rna n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A9W4_PLAHL) HSP 1 Score: 433 bits (1113), Expect = 1.180e-134 Identity = 264/576 (45.83%), Postives = 347/576 (60.24%), Query Frame = 1
Query: 1426 PRELSRRAAAKPLRSIRSVHIMAGGPGATFTALGIPTKMLHHLEGSKGDSVGGGGMGLSGPTVCQVAAIPVLLAGHNAVIKSETGSGKTLAFLLPMLCDLAALEPRVEREKGTFAIVLAPTRELSAQILEVLSRVVRPFIWLVPGSVSGGERRKSEKARLRKGVTILVCTPGRLLDHLKATKCFRRDLLRWLVLDEADRLLDMGFEKQVKEIIELLDQSARAVRYMRVDADKNLVEFVDESGSVKLVSGTREAPKAKAGSAGHHSADSSAKG----EGNSAAPTEVFSTPRQLVQYYMTVTQKLRLPALCAFLRARARE-------------KVVVFMSTCDAVDFHHDMF-----------PDRE----------FFGTGCLVERLHGNVPQGERQATYRAFSASTSGVLICTDVAARGLDLPTVDWIVQYDPPAETADYVHRVGRTARRGERGHSLLFLLPRETSYLGVLEARGLRPKPLSLEGVLCAADAGKR-----------------DARRADEQLLVAGDKTLLGRARAAFQSHVRAYAARAPDSRAVFQVRSLHLGHVARSFALKDPP 2988
PR +KPL S S I A TF ++ + K+++ L+ GG G + PT QV IP +L G++ ++KSETGSGKTLA+LLP++ L A+ P+++R+ G A+VLAPTREL QILE +R+++PF++LVPG++ GGE++K+EKARLRKG+TIL+ TPGRL DHL T+ F L++LVLDEADRLLDMGFEKQ+ +I+ +LD ++ + +NL+ S + SG + K +A AD + G A+ + FSTP QLVQ++M V K RL AL FLR R K+VVF+STCDAVDFHH +F P+ FG+ V RLHGN+PQ +R AT++ F +STSG+L+CTDVAARGL+LPTV WIVQYDPP ET DYVHRVGRTAR G +G SLLFL+P E+ YL L +GL+ LSLE + A GK D + EQ L+A DK L A AF S VR+YA + D+R +F VRSLH GHVA+SFAL+DPP
Sbjct: 162 PRVQIDNELSKPLISSSSDRIFAAN---TFESMQMAEKLVNVLK----KDTESGGFGFARPTYVQVQTIPSVLNGNDVLVKSETGSGKTLAYLLPIVQKLQAVLPKIQRQDGCMALVLAPTRELCTQILETANRLIQPFVYLVPGAIIGGEKKKAEKARLRKGITILIATPGRLADHLVNTQSFNYSRLQFLVLDEADRLLDMGFEKQLTQILTILDAKTQSQKR------QNLLV------SATVSSGVEQLAKMSLSNAVFIDADVISSGVDVPSPTKASSQDKFSTPHQLVQHFMLVPAKTRLCALTCFLREELRYTSQGSIRSASDKCKIVVFLSTCDAVDFHHALFRKCAWPSGKGSPEESENSAGNDSASLFGSQGPVFRLHGNIPQQKRVATFKTFCSSTSGILLCTDVAARGLNLPTVKWIVQYDPPTETRDYVHRVGRTARSGNQGSSLLFLMPSESDYLNYLSKQGLKLNALSLEKTV--ARVGKHGGFLTTRKKLLHEVVQSDLQFLFEQTLLA-DKDLFELACQAFHSFVRSYATHSSDTRNIFHVRSLHFGHVAKSFALRDPP 715
BLAST of mRNA_H-elongata_contig20386.5801.1 vs. uniprot
Match: A0A5D6YC17_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YC17_9STRA) HSP 1 Score: 431 bits (1108), Expect = 1.750e-134 Identity = 259/572 (45.28%), Postives = 338/572 (59.09%), Query Frame = 1
Query: 1456 KPLRSIRSVHIMAGGPGATFTALGIPTKMLHHLEGSKGDSVGGGGMGLSGPTVCQVAAIPVLLAGHNAVIKSETGSGKTLAFLLPMLCDLAALEPRVEREKGTFAIVLAPTRELSAQILEVLSRVVRPFIWLVPGSVSGGERRKSEKARLRKGVTILVCTPGRLLDHLKATKCFRRDLLRWLVLDEADRLLDMGFEKQVKEIIELLDQ-------SARAVRYMRVDADKNLVEFVDESGSVKLVSGTREAPKAKAGSAGHHSADSSAKGEGNSAAPTEVFSTPRQLVQYYMTVTQKLRLPALCAFLRA-------RAREKVVVFMSTCDAVDFHHDMFP-------------------------------DREFFGTGCLVERLHGNVPQGERQATYRAFSASTSGVLICTDVAARGLDLPTVDWIVQYDPPAETADYVHRVGRTARRGERGHSLLFLLPRETSYLGVLEARGLRPKPLSLEGVLCAADAGKR------------DARRADEQLL----VAGDKTLLGRARAAFQSHVRAYAARAPDSRAVFQVRSLHLGHVARSFALKDPP 2988
+PL S S I A TF +L + +++ L +V G G PT QV +IP +L+G +A++KSETGSGKTL++LLP++ L +EPRV+RE G A++LAPTREL QILE +++V+PF++LVPG++ GGE++K+EKARLRKG+++L+ TPGRL DHL T+ FR L++LVLDEADRLLDMGFEKQ+K+I+ ++D+ A R V LV +G +L + + P ADS+A A+ E FSTP QL+Q++M V K RL AL FLR + + KVVVFMSTCD+VDFH+ +F FG+ V RLHGN+PQ ER ++ F A+ SGVL+CTDVAARGL+LPTV WIVQYDPP ET DYVHRVGRTAR G +G SLLFL+P E YL L+ GL LS E L A GK + ++D Q L V DK L A AF S VR+YA D+RA+F VRSLH GH+A+SFAL++PP
Sbjct: 116 RPLESAASEKIFAA---KTFESLQLHPRVVQVLT----KAVASNGFGFERPTTVQVRSIPAVLSGKDALVKSETGSGKTLSYLLPIVHKLQGIEPRVKREDGCLALILAPTRELCLQILETANKLVQPFVYLVPGAIIGGEKKKAEKARLRKGLSVLIATPGRLADHLVNTQAFRYAQLQFLVLDEADRLLDMGFEKQIKQILSIIDRPRDDGERDAATPRRQNV-----LVSATVNTGVEELAKMSLKNPLV----VDADGADSAAAAAAKPASAHESFSTPHQLMQHFMIVPAKARLVALTCFLRQELQHQPKQRQSKVVVFMSTCDSVDFHYGLFSKTAWPAGRHAKPATATAEGAEGADAPAASGVSHSLFGSNGAVFRLHGNIPQHERMTAFKNFCAAASGVLLCTDVAARGLNLPTVQWIVQYDPPTETRDYVHRVGRTARSGNQGSSLLFLMPSEAEYLDHLQKHGLTMAALSTEKTL--ARVGKHGGFLRSNKKLPHEVVQSDLQFLYDQTVLADKELFALACQAFHSFVRSYATHTSDTRAIFHVRSLHFGHIAKSFALREPP 669
BLAST of mRNA_H-elongata_contig20386.5801.1 vs. uniprot
Match: A0A6A3J009_9STRA (Putative ATP-dependent RNA helicase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3J009_9STRA) HSP 1 Score: 427 bits (1099), Expect = 1.750e-132 Identity = 264/584 (45.21%), Postives = 346/584 (59.25%), Query Frame = 1
Query: 1411 EHHARPRELSRRAAAKPLRSIRSVHIMAGGPGATFTALGIPTKMLHHLEGSKGDSVGGGGMGLSGPTVCQVAAIPVLLAGHNAVIKSETGSGKTLAFLLPMLCDLAALEPRVEREKGTFAIVLAPTRELSAQILEVLSRVVRPFIWLVPGSVSGGERRKSEKARLRKGVTILVCTPGRLLDHLKATKCFRRDLLRWLVLDEADRLLDMGFEKQVKEIIELLDQSARAVRYMRVDADKNLVEFVDESGSVKLVSGTREAPKAKAGSAGHHSADSSAKGEGNS----AAPTEVFSTPRQLVQYYMTVTQKLRLPALCAFLRARARE--------------KVVVFMSTCDAVDFHHDMFPD----------------------REFFGTGCLVERLHGNVPQGERQATYRAFSASTSGVLICTDVAARGLDLPTVDWIVQYDPPAETADYVHRVGRTARRGERGHSLLFLLPRETSYLGVLEARGLRPKPLSLEGVLCAADAGKR------------------DARRADEQLLVAGDKTLLGRARAAFQSHVRAYAARAPDSRAVFQVRSLHLGHVARSFALKDPP 2988
E +PR +KPL S S I A TF ++ + K+++ L K DS GG G + PT QV IP +L G++ ++KSETGSGKTL++LLP++ L ++ PR++R+ G A+VLAPTREL +QILE +++V+PF++LVPG++ GGE++K+EKARLRKG+TIL+ TPGRL DHL T+ F L++LVLDEADRLLDMGFEKQ+ +I+ +LD A + + LV SG +L + P AD+ GE + A E FSTP QL+Q++M V K RL AL FLR R K+VVF+STCDAVDFH+ +F FG+ V RLHGN+PQ ER T+++F +S+SGVL+CTDVAARGL+LPTV WIVQYDPP ET DYVHRVGRTAR G +G SLLFL+P E+ YL L +GL+ LS E + A GK D + EQ L+A DK L A AF S VR+YA + D+R +F VRSLH GHVA+SFAL++PP
Sbjct: 164 EKFTQPRVKIDNVLSKPLTSSSSEKIFAAN---TFESMNMTEKLVNVL---KKDSASGG-FGFARPTNVQVQTIPSVLKGNDILVKSETGSGKTLSYLLPIVQKLQSVSPRIQRQDGCMALVLAPTRELCSQILETANKLVQPFVFLVPGAIIGGEKKKAEKARLRKGITILIATPGRLADHLVNTQSFNYARLQFLVLDEADRLLDMGFEKQITQILTILDAQKSAQKRQNI-----LVSATINSGVQQLAKMSLSNPVLI-------DADAITSGEDAATEIKATNQEKFSTPHQLMQHFMLVPAKARLCALTCFLREELRHAPRDTKKDGGPGKCKIVVFLSTCDAVDFHYALFRKCAWPSGKGSSEDADSSGDNNGVASLFGSQGPVFRLHGNIPQQERVTTFKSFCSSSSGVLLCTDVAARGLNLPTVKWIVQYDPPTETRDYVHRVGRTARSGNQGSSLLFLMPSESEYLDYLSKQGLQLNALSHENTV--ARVGKHGGFLTTSRKKLLHEIVQGDLQFLYEQTLLA-DKELFELACQAFHSFVRSYATHSSDTRQIFHVRSLHFGHVAKSFALREPP 725
BLAST of mRNA_H-elongata_contig20386.5801.1 vs. uniprot
Match: A0A3R7H5W5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H5W5_9STRA) HSP 1 Score: 426 bits (1096), Expect = 1.880e-132 Identity = 254/559 (45.44%), Postives = 345/559 (61.72%), Query Frame = 1
Query: 1453 AKPLRSIRSVHIMAGGPGATFTALGIPTKMLHHLEGSKGDSVGGGGMGLSGPTVCQVAAIPVLLAGHNAVIKSETGSGKTLAFLLPMLCDLAALEPRVEREKGTFAIVLAPTRELSAQILEVLSRVVRPFIWLVPGSVSGGERRKSEKARLRKGVTILVCTPGRLLDHLKATKCFRRDLLRWLVLDEADRLLDMGFEKQVKEIIELLDQSARAVRYMRVDADKNLVEFVDESGSVKLVSGTR-EAPKAKAGSAGHHSADSSAKGEGNSAAPTEVFSTPRQLVQYYMTVTQKLRLPALCAFLRARARE-----------KVVVFMSTCDAVDFHHDMF--------------PDRE-----FFGTGCLVERLHGNVPQGERQATYRAFSASTSGVLICTDVAARGLDLPTVDWIVQYDPPAETADYVHRVGRTARRGERGHSLLFLLPRETSYLGVLEARGLRPKPLSLEGVLC--------AADAGKR--------DARRADEQLLVAGDKTLLGRARAAFQSHVRAYAARAPDSRAVFQVRSLHLGHVARSFALKDPP 2988
+KPL S S I A TF ++ + K+++ L+ DS GG G + PT QV IP +L G++ ++KSETGSGKTL++LLP++ L A+ PR++R+ G A+VLAPTREL QILE ++++PF++LVPG++ GGE++K+EKARLR+G+TIL+ TPGRL DHL T+ F L++LVLDEADRLLDMGFEKQ+ +I+ +LD + + + + V + + L + +A K +G+ +++ + E FSTP QLVQ++M V K RL AL FLR R K+VVF+STCDAVDFH+ +F P+ E FG V RLHGN+PQ ER +T++ F +S+SGVL+CTDVAARGL+LPTV WIVQYDPP ET DYVHRVGRTAR G++G SLLFL+P E+ YL L + L+ LSLE + A + K+ D + EQ L+A DK L A +F S VR+YA + D+R +F VRSLH GHVA+SFAL+DPP
Sbjct: 148 SKPLTSSESQKIFAAD---TFESMEMAEKLVNVLK-KDADS---GGFGFAQPTNVQVHTIPSVLTGNDILVKSETGSGKTLSYLLPIVQKLQAVSPRIQRQDGCMALVLAPTRELCTQILETACKLIKPFVFLVPGAIIGGEKKKAEKARLRRGITILIATPGRLADHLVNTQSFDYSKLQFLVLDEADRLLDMGFEKQITQILTILDGKKASQKRQNILVSATINSGVQQLAKMSLSNPVLIDADKVTSGAEAPSASEIKPGSQ-------EKFSTPHQLVQHFMLVPAKARLCALTCFLREELRYAPRAGQRDGKCKIVVFLSTCDAVDFHYALFRKCAWPTIKGSSEEPENEGSVASLFGGQGAVFRLHGNIPQQERVSTFKNFCSSSSGVLLCTDVAARGLNLPTVKWIVQYDPPTETRDYVHRVGRTARSGKQGSSLLFLMPSESEYLDYLSKQNLKLNALSLEKTVARVGKYGGFATSSRKKLMHEVVQSDLQFLYEQTLLA-DKELFELACQSFHSFVRSYATHSSDTRQIFHVRSLHFGHVAKSFALRDPP 691
BLAST of mRNA_H-elongata_contig20386.5801.1 vs. uniprot
Match: M4C4J8_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C4J8_HYAAE) HSP 1 Score: 427 bits (1098), Expect = 2.520e-132 Identity = 260/565 (46.02%), Postives = 340/565 (60.18%), Query Frame = 1
Query: 1453 AKPLRSIRSVHIMAGGPGATFTALGIPTKMLHHLEGSKGDSVGGGGMGLSGPTVCQVAAIPVLLAGHNAVIKSETGSGKTLAFLLPMLCDLAALEPRVEREKGTFAIVLAPTRELSAQILEVLSRVVRPFIWLVPGSVSGGERRKSEKARLRKGVTILVCTPGRLLDHLKATKCFRRDLLRWLVLDEADRLLDMGFEKQVKEIIELLDQSARAVRYMRVDADKNLVEFVDESGSVKLVSGTREAPKAKAGSAGHHSAD--SSAKGEGNSAAPTEVFSTPRQLVQYYMTVTQKLRLPALCAFLRARARE-------------KVVVFMSTCDAVDFHHDMF-----------PDRE-----------FFGTGCLVERLHGNVPQGERQATYRAFSASTSGVLICTDVAARGLDLPTVDWIVQYDPPAETADYVHRVGRTARRGERGHSLLFLLPRETSYLGVLEARGLRPKPLSLEGVLCAA----------------DAGKRDARRADEQLLVAGDKTLLGRARAAFQSHVRAYAARAPDSRAVFQVRSLHLGHVARSFALKDPP 2988
+KPL S+ S I A TF ++ + K+++ L+ GG G + PT QV IP +L G++ +IKSETGSGKTL++LLP++ L + PRV+R+ G A+VLAPTREL QILE ++++PF+++VPG++ GGE++K+EKARLRKG+TILV TPGRL DHL T+ F L++LVLDEADRLLDMGFEKQ+ +I+ +LD A + + LV SG +L + +P A + D S KG G E FSTP QL+Q++M V K RL AL FLR R KVVVF+STCDAVDFH+ +F P + FG V RLHGN+PQ ER T+++F +S+SGVL+CTDVAARGL+LPTV WIVQYDPP ET DYVHRVGRTAR G +G SLLFL+P E+ YL L +GL+ LSLE + + + D + EQ L+A DK L A AF S VR+YA + D+R +F VRSLH GHVA+SFAL++PP
Sbjct: 180 SKPLTSLSSEKIFAAH---TFESMNMSEKLVNALK----KDTESGGFGFARPTNVQVQTIPSVLKGNDILIKSETGSGKTLSYLLPIVQKLQNVTPRVQRQDGCLALVLAPTRELCTQILETTIKLIQPFVYIVPGAIIGGEKKKAEKARLRKGITILVATPGRLADHLVNTQSFNYTGLQFLVLDEADRLLDMGFEKQITQILAILDGKKTARKRQNI-----LVSATINSGVQQLAMLSLSSPVLIDVDATNSDEDALSETKGSGQ-----EKFSTPHQLMQHFMLVPAKARLCALTCFLREELRNAPRDDKNGRPSKCKVVVFLSTCDAVDFHYTLFRKCAWPSGKGSPGNDDTAGEQNGVASLFGNQGPVFRLHGNIPQQERVTTFKSFCSSSSGVLLCTDVAARGLNLPTVKWIVQYDPPTETRDYVHRVGRTARSGNQGSSLLFLMPSESEYLDYLSKQGLKLNALSLEKTVARVSKHGGFSTTSRKKLLHEVVQGDLQFLYEQTLLA-DKELFELACQAFHSFVRSYATHSSDTRQIFHVRSLHFGHVAKSFALREPP 726
BLAST of mRNA_H-elongata_contig20386.5801.1 vs. uniprot
Match: D0MWF4_PHYIT (DEAD/DEAH box RNA helicase, putative n=12 Tax=Phytophthora TaxID=4783 RepID=D0MWF4_PHYIT) HSP 1 Score: 421 bits (1081), Expect = 5.410e-131 Identity = 256/563 (45.47%), Postives = 338/563 (60.04%), Query Frame = 1
Query: 1453 AKPLRSIRSVHIMAGGPGATFTALGIPTKMLHHLEGSKGDSVGGGGMGLSGPTVCQVAAIPVLLAGHNAVIKSETGSGKTLAFLLPMLCDLAALEPRVEREKGTFAIVLAPTRELSAQILEVLSRVVRPFIWLVPGSVSGGERRKSEKARLRKGVTILVCTPGRLLDHLKATKCFRRDLLRWLVLDEADRLLDMGFEKQVKEIIELLDQSARAVRYMRVDADKNLVEFVDESGSVKLVSGTREAP---KAKAGSAGHHSADSSAKGEGNSAAPTEVFSTPRQLVQYYMTVTQKLRLPALCAFLRARARE--------------KVVVFMSTCDAVDFHHDMFPD------------------REFFGTGCLVERLHGNVPQGERQATYRAFSASTSGVLICTDVAARGLDLPTVDWIVQYDPPAETADYVHRVGRTARRGERGHSLLFLLPRETSYLGVLEARGLRPKPLSLE----------GVLCAA------DAGKRDARRADEQLLVAGDKTLLGRARAAFQSHVRAYAARAPDSRAVFQVRSLHLGHVARSFALKDPP 2988
+KPL S S I A TF ++ + K+++ L+ GG G + PT QV IP +L G++ ++KSETGSGKTL++LLP++ L A+ P ++R+ G A++LAPTREL QILE +R+++PF++LVPG++ GGE++K+EKARLRKG+ ILV TPGRL DHL T F L++LVLDEADRLLDMGFEKQ+ +I+ +LD + + + LV SG +L + P A A ++G A +A E F TP QL+Q++M V K RL AL FLR R K+VVF+STCDAVDFH+ +F FG+ + RLHGN+PQ ER T+++F +S SGVL+CTDVAARGL+LPTV WIVQYDPP ET DYVHRVGRTAR G +G SLLFL+P E+ YL L +GL+ LSLE G L + + + D + EQ L+A DK L A AF S VR+YA + D+R +F VRSLHLGHVA+SFAL+DPP
Sbjct: 88 SKPLTSSSSEKIFAAN---TFESMQMSEKLVNVLK----KDTERGGFGFARPTNVQVQTIPSILKGNDILVKSETGSGKTLSYLLPIVQKLQAVSPCIQRQDGCMALILAPTRELCTQILETANRLIQPFVFLVPGAIIGGEKKKAEKARLRKGIIILVATPGRLADHLVNTLSFNYSRLQFLVLDEADRLLDMGFEKQITQILTILDGKKTSQKRQNI-----LVSATVNSGVQQLAKMSLSKPVLIDADALTSGEEPASDM------KSARQEKFFTPHQLMQHFMLVPAKTRLCALTCFLRKELRHAPRDHKKDGSPGKCKIVVFLSTCDAVDFHYALFRKCAWPSGKGASEESESSGVASLFGSQGPIFRLHGNIPQQERVTTFKSFCSSGSGVLLCTDVAARGLNLPTVKWIVQYDPPTETRDYVHRVGRTARSGNQGSSLLFLMPSESEYLDYLSKQGLKLNALSLEKTVSRVGKYGGFLTTSRKKLLHEVVQSDLQFLYEQTLLA-DKELFELACQAFHSFVRSYATHSSDTRNIFHVRSLHLGHVAKSFALRDPP 631 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20386.5801.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig20386.5801.1 >prot_H-elongata_contig20386.5801.1 ID=prot_H-elongata_contig20386.5801.1|Name=mRNA_H-elongata_contig20386.5801.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=997bp MTDYGLELNLVSAPAAAPPSSFQRRKRISRYAWDKKNRKKRGEERRQLSPback to top mRNA from alignment at H-elongata_contig20386:1405..5863+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig20386.5801.1 ID=mRNA_H-elongata_contig20386.5801.1|Name=mRNA_H-elongata_contig20386.5801.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4459bp|location=Sequence derived from alignment at H-elongata_contig20386:1405..5863+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig20386:1405..5863+ >mRNA_H-elongata_contig20386.5801.1 ID=mRNA_H-elongata_contig20386.5801.1|Name=mRNA_H-elongata_contig20386.5801.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=5982bp|location=Sequence derived from alignment at H-elongata_contig20386:1405..5863+ (Himanthalia elongata Himel1 dioecious)back to top |