mRNA_H-elongata_contig10706.580.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig10706.580.1 vs. uniprot
Match: A0A6H5K8A8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8A8_9PHAE) HSP 1 Score: 532 bits (1371), Expect = 6.230e-180 Identity = 261/314 (83.12%), Postives = 286/314 (91.08%), Query Frame = 1
Query: 4 FNRTYELGDKIGEGAFSTVKVATVIANGAHKGMQVAVKCIRRHNLPKEDEEDLLEEVRILRNLKHPNVIEIYQFYKDDPEYYYVVIEFMRGGELFDRIVRKAFYNEKEARDLCRILLDAVKYIHDLGIVHRDLKPENLLLTSKHDDANIKLADFGFARSVMNDFVSTQCGTPGYVAPEILRAEPYGTSVDMWSIGVIIYILIGGYPPFHDENQTRLFRKIKAGNFKFHSEYWGSISSDAKDLIRRLLTVDSKKRLTAAQAVSHPWLFSREDDLVSHNLGVNLEQLKLFNARRKLRAAIKSVLATQKLASAFQVE 945
F TY LG+ IGEGAFS V ATV G ++G+QVAVKCI R+NLPKEDEEDLLEEVRILR+LKHPNVI+IYQF+KDDP+ YYV IE+MRGGELFDRIV+KAFYNEKEARDLCRILLDAV+Y HDLGIVHRDLKPENLLLTS+HDDAN+KLADFGFARS+M FVSTQCGTPGYVAPEILRAE YGTSVDMWSIGVI+YIL+GGYPPFHDENQTRLFRKIKAGNFKFH EYW S SS+AKDLIRRLLTVD KKRLTAAQAV+HPWL S++DDL+ HNLGVNLEQL+LFNARRKLRAAIKSVLATQ +A F +E
Sbjct: 51 FYDTYHLGNVIGEGAFSKVYSATVKKPGPNQGLQVAVKCIERNNLPKEDEEDLLEEVRILRSLKHPNVIDIYQFFKDDPDNYYVSIEYMRGGELFDRIVKKAFYNEKEARDLCRILLDAVRYCHDLGIVHRDLKPENLLLTSQHDDANVKLADFGFARSIMGGFVSTQCGTPGYVAPEILRAESYGTSVDMWSIGVIVYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWQSTSSEAKDLIRRLLTVDPKKRLTAAQAVTHPWLLSKDDDLLKHNLGVNLEQLRLFNARRKLRAAIKSVLATQMMAGKFNIE 364
BLAST of mRNA_H-elongata_contig10706.580.1 vs. uniprot
Match: A0A835YZ60_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ60_9STRA) HSP 1 Score: 437 bits (1124), Expect = 3.440e-143 Identity = 215/304 (70.72%), Postives = 249/304 (81.91%), Query Frame = 1
Query: 16 YELGDKIGEGAFSTVKVATVIANGAHKGMQVAVKCIRRHNLPKEDEEDLLEEVRILRNLKHPNVIEIYQFYKDDPEYYYVVIEFMRGGELFDRIVRKAFYNEKEARDLCRILLDAVKYIHDLGIVHRDLKPENLLLTSKHDDANIKLADFGFARSVMNDFVSTQCGTPGYVAPEILRAEPYGTSVDMWSIGVIIYILIGGYPPFHDENQTRLFRKIKAGNFKFHSEYWGSISSDAKDLIRRLLTVDSKKRLTAAQAVSHPWLFSREDDLVSHNLGVNLEQLKLFNARRKLRAAIKSVLATQKLA 927
++LG +GEGA++ V T G AVK +R+ NL EDE DLLEEV+ILR L HPN+I+IYQFY+ + + YYV+IE+MRGGELFDRIV+K FY EKEARDLC+ILLDA+KY HD IVHRDLKPENLLLTS DDA+IKLADFGFA+++ V+TQCGTP YVAPEILR PYGTSVDMWSIGVIIYIL+GGYPPFHDENQTRLFRKI+AG F+FH+EYWGSISSDAKDLI RLLTVD RLTA +AVSHPWL + + DL + NLG NLEQLKLFNARRKLRAAIKSVL +++A
Sbjct: 41 FKLGKDLGEGAYAKVVEGTYSVTGR----TYAVKMVRKANLAPEDEADLLEEVKILRQLNHPNIIDIYQFYRQERDNYYVIIEYMRGGELFDRIVKKQFYTEKEARDLCKILLDAIKYCHDRDIVHRDLKPENLLLTSNDDDASIKLADFGFAKALNGSMVTTQCGTPAYVAPEILRHRPYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIRAGKFEFHNEYWGSISSDAKDLISRLLTVDQHSRLTAREAVSHPWLLTSDTDLAARNLGKNLEQLKLFNARRKLRAAIKSVLVARRMA 340
BLAST of mRNA_H-elongata_contig10706.580.1 vs. uniprot
Match: D8LK21_ECTSI (Possible Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK21_ECTSI) HSP 1 Score: 434 bits (1116), Expect = 2.490e-141 Identity = 214/314 (68.15%), Postives = 256/314 (81.53%), Query Frame = 1
Query: 4 FNRTYELGDKIGEGAFSTVKVATVIANGAHKGMQVAVKCIRRHNLPKEDEEDLLEEVRILRNLKHPNVIEIYQFYKDDPEYYYVVIEFMRGGELFDRIVRKAFYNEKEARDLCRILLDAVKYIHDLGIVHRDLKPENLLLTSKHDDANIKLADFGFARSVMNDFVSTQCGTPGYVAPEILRAEPYGTSVDMWSIGVIIYILIGGYPPFHDENQTRLFRKIKAGNFKFHSEYWGSISSDAKDLIRRLLTVDSKKRLTAAQAVSHPWLFSREDDLVSHNLGVNLEQLKLFNARRKLRAAIKSVLATQKLASAFQVE 945
F+R++ LG K+GEGAF+ V ATV + G AVK R L KEDE+ LLEEVRILR L+H NV+ IYQF++DDP+YYY+V+E M GGELFDRIV+K++YNE+EARDLCR+LLD+V+Y H+LGIVHRDLKPENLLLTSKHDDA IKLADFGFA SV+N VS QCG+PGYVAPEILRA PYGTSVDMWS+GVIIY L+GGYPPFHDENQTRLFR+IKAG+FKFH EYW + S +AKDLIR+LL VD KR+TA QA HPWL + L HNLG NL+QL++FNA RKLR AI+SV+A +KL +F ++
Sbjct: 76 FSRSFNLGKKLGEGAFAEVFEATVKGDRPG-GKSYAVKRTVRRGLAKEDEKGLLEEVRILRLLQHSNVVAIYQFFQDDPDYYYMVLENMAGGELFDRIVQKSYYNEEEARDLCRVLLDSVRYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRKLLLVDPAKRMTATQAAEHPWLLTTGASLAGHNLGKNLDQLRIFNATRKLRGAIQSVIAAKKLGKSFGLQ 388
BLAST of mRNA_H-elongata_contig10706.580.1 vs. uniprot
Match: D8LEF0_ECTSI (Myosin light chain kinase (MLCK) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF0_ECTSI) HSP 1 Score: 392 bits (1006), Expect = 5.460e-121 Identity = 188/321 (58.57%), Postives = 247/321 (76.95%), Query Frame = 1
Query: 4 FNRTYELGDKIGEGAFSTVKVATVIA--------NGAHKGM-----QVAVKCIRRHNLPKEDEEDLLEEVRILRNLKHPNVIEIYQFYKDDPEYYYVVIEFMRGGELFDRIVRKAFYNEKEARDLCRILLDAVKYIHDLGIVHRDLKPENLLLTSKHDDANIKLADFGFARSVMNDFVSTQCGTPGYVAPEILRAEPYGTSVDMWSIGVIIYILIGGYPPFHDENQTRLFRKIKAGNFKFHSEYWGSISSDAKDLIRRLLTVDSKKRLTAAQAVSHPWLFSREDDLVSHNLGVNLEQLKLFNARRKLRAAIKSVLATQKLA 927
F++ Y+LG+ +GEGA+ V AT +GA G + AVK I+R L ++E++++ E I+R L HPN++ IY FY+DDP+++Y+V+E M GGELFDRIV+K +YNE EARD+C L+A+KY H G+VHRDLKPENLLL SK DD++I+LADFGFA SV++ +V+ QCGTPGYVAPEILR+ PYGTSVDMWSIGVIIYI++ GYPPFHDE+Q RL+RKIKAG+++F EYW +SS+AKDLIR+LLTVD +RLTAA+A HPWL + +L H+LG LE+LK+FNA RKLRAAI+SVL ++K+A
Sbjct: 358 FSKAYQLGNMLGEGAYGMVFKATPALPASLSEEEDGADDGSAAAPREYAVKRIKREGLSDQEEQEVIAEANIMRELDHPNLVSIYDFYQDDPKFFYMVLELMEGGELFDRIVQKQYYNEAEARDVCLTFLEAMKYTHGQGVVHRDLKPENLLLASKSDDSSIRLADFGFAVSVLDGYVTDQCGTPGYVAPEILRSRPYGTSVDMWSIGVIIYIILAGYPPFHDEDQNRLYRKIKAGHYRFDPEYWNDVSSEAKDLIRKLLTVDPTRRLTAAEACEHPWLSTARGNLTQHDLGAGLEKLKIFNATRKLRAAIRSVLLSKKIA 678
BLAST of mRNA_H-elongata_contig10706.580.1 vs. uniprot
Match: A0A7S2XV40_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV40_9STRA) HSP 1 Score: 374 bits (959), Expect = 2.090e-118 Identity = 186/336 (55.36%), Postives = 251/336 (74.70%), Query Frame = 1
Query: 4 FNRTYELGDKIGEGAFSTVKVATVIANGAHKGMQVAVKCIRRHNLPKEDEEDLLEEVRILRNLKHPNVIEIYQFYKDDPEYYYVVIEFMRGGELFDRIVRKAFYNEKEARDLCRILLDAVKYIHDLGIVHRDLKPENLLLTSKHDDANIKLADFGFARSVM-NDFVSTQCGTPGYVAPEILRAEPYGTSVDMWSIGVIIYILIGGYPPFHDENQTRLFRKIKAGNFKFHSEYWGSISSDAKDLIRRLLTVDSKKRLTAAQAVSHPWLFSREDDLVSHNLGVNLEQLKLFNARRKLRAAIKSVLATQKL--------ASAFQVEIWD*GAEVAESRG 984
F+++Y+L ++G G+FSTV+ NG + AVK ++R +LP +DEE L+EEV IL+++ HPN+I++Y+F+ ++ +YY+VIE M GGELFDRIV+K +YNEKEARDL ILL A+K+ HD GIVHRDLKPENLLLTS DDA+IK+ADFGFAR V ++ ++TQCGTPGYVAPEIL PYG +VDMWSIGVI YIL+GGYPPFHDE Q+ LF KI+AG+F FH EYW +S +AKDLIR+LLTVD KR+TAA+A+ HPW+ ++ L + NL L +L+ FNARRK R+ +K+++A ++ A+A +E+ AE +S+G
Sbjct: 24 FDKSYKLLKELGSGSFSTVREGVSKLNGE----RFAVKIVKRMDLPPDDEEALIEEVTILKHVDHPNIIKLYEFF-EEKHFYYLVIELMEGGELFDRIVQKTYYNEKEARDLVHILLSAIKFCHDNGIVHRDLKPENLLLTSSKDDASIKIADFGFARQVKESNNLTTQCGTPGYVAPEILNGVPYGLAVDMWSIGVITYILLGGYPPFHDEKQSNLFAKIRAGDFVFHPEYWDPVSEEAKDLIRKLLTVDPNKRITAAEAMQHPWVTGADETLAARNLDSQLRELRRFNARRKFRSGVKAIVAANRMQAIIGGLKAAANTIEVE---AEAEKSKG 351
BLAST of mRNA_H-elongata_contig10706.580.1 vs. uniprot
Match: A0A6H5KCN7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN7_9PHAE) HSP 1 Score: 358 bits (919), Expect = 2.010e-114 Identity = 169/231 (73.16%), Postives = 198/231 (85.71%), Query Frame = 1
Query: 253 VVIEFMRGGELFDRIVRKAFYNEKEARDLCRILLDAVKYIHDLGIVHRDLKPENLLLTSKHDDANIKLADFGFARSVMNDFVSTQCGTPGYVAPEILRAEPYGTSVDMWSIGVIIYILIGGYPPFHDENQTRLFRKIKAGNFKFHSEYWGSISSDAKDLIRRLLTVDSKKRLTAAQAVSHPWLFSREDDLVSHNLGVNLEQLKLFNARRKLRAAIKSVLATQKLASAFQVE 945
+V+E M GGELFDRIV+K +YNE+EARDLCR+LLD+VKY H+LGIVHRDLKPENLLLTSKHDDA IKLADFGFA SV+N VS QCG+PGYVAPEILRA PYGTSVDMWS+GVIIY L+GGYPPFHDENQTRLFR+IKAG+FKFH EYW + S +AKDLIR+LL VD KR+TA QA HPWL + + L SHNLG NL+QL++FNA RKLR AI+SV+A +KL +F ++
Sbjct: 1 MVLENMAGGELFDRIVQKTYYNEEEARDLCRVLLDSVKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRKLLLVDPAKRMTATQAAEHPWLLTTGESLASHNLGKNLDQLRIFNATRKLRGAIQSVIAAKKLGKSFGLQ 231
BLAST of mRNA_H-elongata_contig10706.580.1 vs. uniprot
Match: A0A6V1U2B4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U2B4_HETAK) HSP 1 Score: 362 bits (929), Expect = 2.220e-114 Identity = 177/314 (56.37%), Postives = 235/314 (74.84%), Query Frame = 1
Query: 4 FNRTYELGDKIGEGAFSTVKVATVIANGAHK--GMQVAVKCIRRHNLPKEDEEDLLEEVRILRNLKHPNVIEIYQFYKDDPEYYYVVIEFMRGGELFDRIVRKAFYNEKEARDLCRILLDAVKYIHDLGIVHRDLKPENLLLTSKHDDANIKLADFGFARSVMNDFVSTQCGTPGYVAPEILRAEPYGTSVDMWSIGVIIYILIGGYPPFHDENQTRLFRKIKAGNFKFHSEYWGSISSDAKDLIRRLLTVDSKKRLTAAQAVSHPWLFSREDDLVSHNLGVNLEQLKLFNARRKLRAAIKSVLATQKLASAFQ 939
F Y+L ++G G+FSTV+ G +K + AVK ++R +LP EDEE L+EEV ILR + HPN+I+++ F+ ++ +YY+V E M+GGELFDRIV+K FYNEKEARDL +ILL AVKY HD IVHRDLKPENLLL+S DDA+IK+ADFGFAR + + ++TQCGTPGYVAPEIL PYG SVDMWS GVI YIL+GGYPPFHDE Q+ LF KI++G+++FH EYW ++S DA+DLI+++LTVD +R+TA A +HPW+ + D L L NL +L+ FNARRK R+ +K+++A ++AS Q
Sbjct: 26 FENMYKLQRELGSGSFSTVR------EGINKQTNERFAVKIVKRMDLPLEDEEALIEEVTILRGISHPNIIKLFDFF-EEKHFYYLVTELMQGGELFDRIVKKTFYNEKEARDLVKILLSAVKYCHDNDIVHRDLKPENLLLSSAEDDASIKIADFGFARLLRGNTLTTQCGTPGYVAPEILNGVPYGKSVDMWSCGVITYILLGGYPPFHDEKQSNLFAKIRSGSYEFHPEYWQNVSKDAQDLIKKMLTVDIAQRITAEAACNHPWVQADADVLAKRGLDGNLTELRRFNARRKFRSGVKAIVAANRMASIVQ 332
BLAST of mRNA_H-elongata_contig10706.580.1 vs. uniprot
Match: A0A6H5JU42_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JU42_9PHAE) HSP 1 Score: 360 bits (924), Expect = 2.050e-112 Identity = 172/309 (55.66%), Postives = 230/309 (74.43%), Query Frame = 1
Query: 4 FNRTYELGDKIGEGAFSTVKVATVIANGAHK--GMQVAVKCIRRHNLPKEDEEDLLEEVRILRNLKHPNVIEIYQFYKDDPEYYYVVIEFMRGGELFDRIVRKAFYNEKEARDLCRILLDAVKYIHDLGIVHRDLKPENLLLTSKHDDANIKLADFGFARSVMNDFVSTQCGTPGYVAPEILRAEPYGTSVDMWSIGVIIYILIGGYPPFHDENQTRLFRKIKAGNFKFHSEYWGSISSDAKDLIRRLLTVDSKKRLTAAQAVSHPWLFSREDDLVSHNLGVNLEQLKLFNARRKLRAAIKSVLATQKL 924
F + Y+LG ++G G+FSTV+ G HK G + AVKC++R +LP EDE DL EV++L+ ++H N++++Y FY++ ++Y+V+E + GGELFDRIV K YNEKEARD+ ++L A+KY HD I HRDLKPENLLL S DDA IKLADFGFAR V +S QCGTPGYVAPE+L+ E YG VD+WSIGVI YIL+GGYPPFHD+NQ +L++KIK G FH +YW ++S +AKDLI+++LT+D KR+TA QA+ HPW+ +L H+LG N+ +L+LFNARRK ++AI SV+A Q L
Sbjct: 65 FEQMYQLGKELGHGSFSTVR------EGTHKESGERFAVKCVKRADLPPEDEADLKMEVKLLQEIEHENIVKLYDFYQEK-HFFYLVMEILDGGELFDRIVLKQVYNEKEARDVLKVLFKAIKYCHDRDIAHRDLKPENLLLVSDDDDAVIKLADFGFARPVGETGLSAQCGTPGYVAPEVLKGEVYGKPVDIWSIGVITYILLGGYPPFHDDNQAKLYQKIKKGKVLFHPQYWSTVSDEAKDLIKKMLTLDKDKRITAEQALEHPWVVGDAAELEKHDLGANMGKLRLFNARRKFKSAISSVIAAQAL 366
BLAST of mRNA_H-elongata_contig10706.580.1 vs. uniprot
Match: A0A836CHL2_9STRA (Putative calcium/calmodulin-dependent protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHL2_9STRA) HSP 1 Score: 355 bits (910), Expect = 3.190e-111 Identity = 173/306 (56.54%), Postives = 227/306 (74.18%), Query Frame = 1
Query: 10 RTYELGDKIGEGAFSTVKVATVIANGAHKGMQVAVKCIRRHNLPKEDEEDLLEEVRILRNLKHPNVIEIYQFYKDDPEYYYVVIEFMRGGELFDRIVRKAFYNEKEARDLCRILLDAVKYIHDLGIVHRDLKPENLLLTSKHDDANIKLADFGFARSVMNDFVSTQCGTPGYVAPEILRAEPYGTSVDMWSIGVIIYILIGGYPPFHDENQTRLFRKIKAGNFKFHSEYWGSISSDAKDLIRRLLTVDSKKRLTAAQAVSHPWLFSREDDLVSHNLGVNLEQLKLFNARRKLRAAIKSVLATQKLA 927
+ YELG +G GAF+ V++AT G AVKCI++ L + + DL++EV +LR + HPNV+ +YQFY + +++YV++E+M+GGELF+RIV K Y EKEAR +CR+LL V+Y+HD +VHRDLKP+NLLLTS DDANIKLADFGFA+ + ++ CGTP Y+APEIL EPYG +VDMWS+G IIYIL+GGY PF D+NQTRLFRKI+ G + FH EYW IS +AKDLIR L VD++KRLTAAQA+ HPWL +D L + L +LE+L+LFNARRKLR AI++V+ + A
Sbjct: 42 KKYELGAVLGAGAFAEVRLATYKKTGT----TYAVKCIKKQGLDELTKADLMDEVAVLREMAHPNVVNVYQFYPREKDHFYVIMEYMKGGELFERIVAKQVYTEKEARAVCRVLLATVRYLHDHDVVHRDLKPDNLLLTSDADDANIKLADFGFAKKLDGQKLTQLCGTPNYIAPEILLHEPYGVTVDMWSLGCIIYILLGGYLPFVDDNQTRLFRKIRNGAYSFHPEYWSDISDEAKDLIRGCLNVDAEKRLTAAQAMEHPWLAVSDDCLGGNCLDKSLERLQLFNARRKLRGAIRTVMTARHCA 343
BLAST of mRNA_H-elongata_contig10706.580.1 vs. uniprot
Match: A0A8J2S556_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S556_9STRA) HSP 1 Score: 353 bits (905), Expect = 6.350e-111 Identity = 174/310 (56.13%), Postives = 228/310 (73.55%), Query Frame = 1
Query: 4 FNRTYELGDK-IGEGAFSTVKVATVIANGAHKGMQVAVKCIRRHN-LPKEDEEDLLEEVRILRNLKHPNVIEIYQFYKDDPEYYYVVIEFMRGGELFDRIVRKAFYNEKEARDLCRILLDAVKYIHDLGIVHRDLKPENLLLTSKHDDANIKLADFGFARSVMNDFVSTQCGTPGYVAPEILRAEPYGTSVDMWSIGVIIYILIGGYPPFHDENQTRLFRKIKAGNFKFHSEYWGSISSDAKDLIRRLLTVDSKKRLTAAQAVSHPWLFSREDDLVSHNLGVNLEQLKLFNARRKLRAAIKSVLATQKLA 927
F R Y L DK +G GAFS V +AT +++G +VAVKCI ++ L +ED + L EEV +LR++ HPN++++Y F+ D+ YYY+ IE M GGELF+RIV+K FYNE +AR L RILLDA+ Y+H GIVHRDLKPENLLL S +D +IKLADFGFA+ V + TQCGTPGYVAPEIL+ + YGT+VDMWS GVI+YIL+GGYPPFHD+N L+RKIKA ++ F +YW +S DAKDLI+++L VD KRLTA+QA+ HPW + +L+S NL L+ +K FNARRK + +K ++ KLA
Sbjct: 21 FARKYNLDDKELGTGAFSRVILAT-----SNEGTKVAVKCISKNGELKQEDIDSLHEEVAVLRSVDHPNIVKLYDFF-DEKRYYYMAIELMEGGELFERIVKKTFYNEMDARGLVRILLDALAYLHHRGIVHRDLKPENLLLKSPFNDFDIKLADFGFAKKVEGKSLDTQCGTPGYVAPEILKGKKYGTAVDMWSCGVIVYILLGGYPPFHDDNHAVLYRKIKAADYAFDPQYWDQVSDDAKDLIKKMLVVDPDKRLTASQALRHPWFMVGDHELISRNLAKTLDTMKKFNARRKFKGKVKGIILANKLA 324 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10706.580.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10706.580.1 >prot_H-elongata_contig10706.580.1 ID=prot_H-elongata_contig10706.580.1|Name=mRNA_H-elongata_contig10706.580.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=286bp MQVAVKCIRRHNLPKEDEEDLLEEVRILRNLKHPNVIEIYQFYKDDPEYYback to top mRNA from alignment at H-elongata_contig10706:111..5576- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10706.580.1 ID=mRNA_H-elongata_contig10706.580.1|Name=mRNA_H-elongata_contig10706.580.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5466bp|location=Sequence derived from alignment at H-elongata_contig10706:111..5576- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10706:111..5576- >mRNA_H-elongata_contig10706.580.1 ID=mRNA_H-elongata_contig10706.580.1|Name=mRNA_H-elongata_contig10706.580.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1716bp|location=Sequence derived from alignment at H-elongata_contig10706:111..5576- (Himanthalia elongata Himel1 dioecious)back to top |