mRNA_H-elongata_contig20385.5800.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig20385.5800.1
Unique NamemRNA_H-elongata_contig20385.5800.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig20385.5800.1 vs. uniprot
Match: D7FJY6_ECTSI (Hydrocephalus-inducing protein, Hydin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJY6_ECTSI)

HSP 1 Score: 248 bits (632), Expect = 3.200e-73
Identity = 115/153 (75.16%), Postives = 131/153 (85.62%), Query Frame = 1
Query:    1 FVVPLLNFCQTEFHFSHVWDSDVPMVPSSKSLQMTNNGLLPLGFTVKTQPPFSVDIAEHSLKVGESGELSVGFDPGYRGDSQSCRYESKLSVTYRNHSQKDGLPVVGDVAFPNLDFEYTRVSFGCVLNDTTMTKLVRITNSSIVDCAFRWSFL 459
            FV PLL F + EFHFSHVW+ +VPM PS + L+MTN G LPL F+V+T PPFSVD  EHSL VGE+G+L+VGFDPGYRGDSQS RYESKLSVTYR+H QKDGL VVG VA+PNLDFEYT+VSFGCVLNDTTMTK VR+TN+S+VDC F WSFL
Sbjct: 1147 FVAPLLCFSRPEFHFSHVWEPEVPMTPSFEELEMTNTGRLPLDFSVRTHPPFSVDAVEHSLGVGETGKLTVGFDPGYRGDSQSYRYESKLSVTYRDHPQKDGLLVVGAVAYPNLDFEYTKVSFGCVLNDTTMTKAVRVTNNSVVDCTFSWSFL 1299          
BLAST of mRNA_H-elongata_contig20385.5800.1 vs. uniprot
Match: A0A6H5K5Z3_9PHAE (MSP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Z3_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 7.390e-63
Identity = 105/153 (68.63%), Postives = 120/153 (78.43%), Query Frame = 1
Query:    1 FVVPLLNFCQTEFHFSHVWDSDVPMVPSSKSLQMTNNGLLPLGFTVKTQPPFSVDIAEHSLKVGESGELSVGFDPGYRGDSQSCRYESKLSVTYRNHSQKDGLPVVGDVAFPNLDFEYTRVSFGCVLNDTTMTKLVRITNSSIVDCAFRWSFL 459
            FV PLL F + EFHFSHVW+ +VPM PS + L+MTN G LPL F+V+T PPFSVD  EHSL VGE+G+L+VGFDPGYRGDSQS RYESKLSVTYR+H QKDGL VVG+V            SFGCVLNDTTMTK VR+TN+S+VDC F WSFL
Sbjct: 1098 FVAPLLCFSRPEFHFSHVWEPEVPMTPSFEELEMTNTGRLPLDFSVRTHPPFSVDAVEHSLGVGETGKLTVGFDPGYRGDSQSYRYESKLSVTYRDHPQKDGLLVVGEV------------SFGCVLNDTTMTKAVRVTNNSVVDCTFNWSFL 1238          
BLAST of mRNA_H-elongata_contig20385.5800.1 vs. uniprot
Match: F0Y448_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y448_AURAN)

HSP 1 Score: 160 bits (406), Expect = 8.380e-43
Identity = 74/152 (48.68%), Postives = 104/152 (68.42%), Query Frame = 1
Query:    4 VVPLLNFCQTEFHFSHVWDSDVPMVPSSKSLQMTNNGLLPLGFTVKTQPPFSVDIAEHSLKVGESGELSVGFDPGYRGDSQSCRYESKLSVTYRNHSQKDGLPVVGDVAFPNLDFEYTRVSFGCVLNDTTMTKLVRITNSSIVDCAFRWSFL 459
            + PLL+F      F H  + DVP+ P S++L + NN +LPL F ++   PFSVD  EH+L+  E   + V FDPGY+GD QS + +++L+V Y  H Q+D + +VG++ FPNL FEY+ V+FGC+LNDTTMT  VR+TN S V+ AF W+FL
Sbjct: 1015 IEPLLSFSSPSLGFVHDHEPDVPIQPQSQALTLKNNAVLPLVFALRCAVPFSVDAWEHTLEPDEETTVRVDFDPGYKGDRQSQKLDTRLTVAYHQHPQRDSVGLVGEINFPNLHFEYSVVNFGCILNDTTMTMRVRVTNCSKVETAFSWAFL 1166          
BLAST of mRNA_H-elongata_contig20385.5800.1 vs. uniprot
Match: A0A7S2QVW6_9STRA (Hypothetical protein n=2 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVW6_9STRA)

HSP 1 Score: 160 bits (404), Expect = 1.550e-42
Identity = 75/153 (49.02%), Postives = 102/153 (66.67%), Query Frame = 1
Query:    1 FVVPLLNFCQTEFHFSHVWDSDVPMVPSSKSLQMTNNGLLPLGFTVKTQPPFSVDIAEHSLKVGESGELSVGFDPGYRGDSQSCRYESKLSVTYRNHSQKDGLPVVGDVAFPNLDFEYTRVSFGCVLNDTTMTKLVRITNSSIVDCAFRWSFL 459
            F+ PLL+       +S+ W+ DVP+   +K + MTN   LPL F +K Q P+++D  EHSL   ES  ++V FDPGY+ D QS   ES L+  Y+ H Q+D + + G++ FPNLDFEYT ++FGCVLNDTT T LV++TN S VD AF WSF+
Sbjct:  419 FMNPLLDLSVPALDYSYTWEKDVPIEIITKPMTMTNRTPLPLHFVLKAQIPYTIDQWEHSLAPQESATINVDFDPGYKADRQSHIAESALTAVYKGHPQRDNIKLTGEINFPNLDFEYTVINFGCVLNDTTKTMLVKVTNVSKVDTAFSWSFV 571          
BLAST of mRNA_H-elongata_contig20385.5800.1 vs. uniprot
Match: A0A835YJI6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJI6_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.550e-33
Identity = 71/165 (43.03%), Postives = 94/165 (56.97%), Query Frame = 1
Query:    1 FVVPLLNFCQTEFHFSHVWDSDVPMVPSS--------------KSLQMTNNGLLPLGFTVKTQPPFSVDIAEHSLKVGESGELSVGFDPGYRGDSQSCRYESKLSVTYRNHSQKDGLPVVGDVAFPNLDFEYTRVSFGCVLNDTTMTKLVRITNSSIVDCAFRWS 453
            FV PLL F      F++     +P   ++              + L +TN G LPL  T++T  PFSVD  EHSL  G +  +SV FD GYRGD  +   E  L+  Y  H Q+D +P+VGD+A+PNL     RV+FGCVLNDTT T+ VR+TN + V  AFRW+
Sbjct: 1073 FVTPLLQFSAPALRFAYTHAPPLPPGAAAGXXXXXXXXXXCQAQPLTLTNAGPLPLEVTLRTSAPFSVDTWEHSLAPGAATAVSVLFDAGYRGDRVAHAAEGALTAAYAGHPQRDAIPLVGDIAYPNLALSARRVAFGCVLNDTTATRAVRVTNCTRVPAAFRWT 1237          
BLAST of mRNA_H-elongata_contig20385.5800.1 vs. uniprot
Match: A0A485LSA9_9STRA (Aste57867_25117 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LSA9_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.620e-33
Identity = 68/154 (44.16%), Postives = 96/154 (62.34%), Query Frame = 1
Query:    1 FVVPLLNFCQTE-FHFSHVWDSDVPMVPSSKSLQMTNNGLLPLGFTVKTQPPFSVDIAEHSLKVGESGELSVGFDPGYRGDSQSCRYESKLSVTYRNHSQKDGLPVVGDVAFPNLDFEYTRVSFGCVLNDTTMTKLVRITNSSIVDCAFRWSFL 459
            F+ P ++  Q    HFS+ +  DV +   ++ L  TN   LPL F +KTQ PFSVD+ E +L+  ES  L+V F PGY+ D  S    SKLS +Y  H Q+D + + G++ FPNL+FEY+R+ FGC+LNDT  +  V++TN S V  AF W F+
Sbjct: 1309 FINPKMDSSQASGMHFSYTYAPDVDIETQTQPLVFTNVCELPLSFVLKTQVPFSVDMWEATLQPQESIALNVEFYPGYKDDHMSRVINSKLSTSYTGHPQRDSIELKGEIFFPNLEFEYSRIDFGCILNDTQKSLTVKVTNISKVTTAFHWVFI 1462          
BLAST of mRNA_H-elongata_contig20385.5800.1 vs. uniprot
Match: A0A7S1CHV8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CHV8_9STRA)

HSP 1 Score: 122 bits (305), Expect = 5.280e-33
Identity = 58/116 (50.00%), Postives = 79/116 (68.10%), Query Frame = 1
Query:   94 LQMTNNGLLPLGFTVKTQPPFSVDIAEHSLKVGESGELSVGFDPGYRGDSQSCRYESKLSVTYRNHSQKDGLPVVGDVAFPNLDFEYTRVSFGCVLNDTTMTKLVRITNSSIVDCA 441
            + + N   LPL F ++T  PFS+D  E SL+  E   ++V FDPGY+ D QS   E KL+  YR+H ++D   ++GDV FPN++FEYTRV FG VLNDTT +  VR+TN+S +DCA
Sbjct:    3 MTLRNVSKLPLSFVLRTAQPFSLDRWEFSLEPDEEVVVNVEFDPGYKDDCQSHVAEKKLTAVYRDHPRRDAWNLIGDVNFPNVEFEYTRVDFGTVLNDTTKSTTVRVTNTSKIDCA 118          
BLAST of mRNA_H-elongata_contig20385.5800.1 vs. uniprot
Match: A0A8K1CD31_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CD31_PYTOL)

HSP 1 Score: 130 bits (328), Expect = 2.640e-32
Identity = 67/156 (42.95%), Postives = 96/156 (61.54%), Query Frame = 1
Query:    1 FVVPLLN--FCQTEFHFSHVWDS-DVPMVPSSKSLQMTNNGLLPLGFTVKTQPPFSVDIAEHSLKVGESGELSVGFDPGYRGDSQSCRYESKLSVTYRNHSQKDGLPVVGDVAFPNLDFEYTRVSFGCVLNDTTMTKLVRITNSSIVDCAFRWSFL 459
            FV P LN      +F + H+    D+P    S+ L +TN   LPL FT++TQPPFS+D  E  L+ GE  + +V F PGY+ D Q    + K+++ Y  H Q+D + ++GD++FPNL FE T++ FGC LNDT  +  V +TN S V+ AFRW F+
Sbjct: 1006 FVEPKLNPSVSSLQFEYIHIPPGRDIPR--QSQPLSLTNVCALPLTFTMRTQPPFSLDCWEAELEPGEKVDFTVEFYPGYKDDHQCRVIQGKVAIAYLGHPQRDSVELIGDISFPNLSFETTKIDFGCTLNDTQKSLTVVVTNVSKVETAFRWVFV 1159          
BLAST of mRNA_H-elongata_contig20385.5800.1 vs. uniprot
Match: A0A1V9Y885_9STRA (Hydrocephalus-inducing protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y885_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.680e-31
Identity = 62/139 (44.60%), Postives = 88/139 (63.31%), Query Frame = 1
Query:   43 FSHVWDSDVPMVPSSKSLQMTNNGLLPLGFTVKTQPPFSVDIAEHSLKVGESGELSVGFDPGYRGDSQSCRYESKLSVTYRNHSQKDGLPVVGDVAFPNLDFEYTRVSFGCVLNDTTMTKLVRITNSSIVDCAFRWSFL 459
            FS++++  V M   S+ L +TN   LPL F ++TQ PFSVD+ E  L+  ES EL+V F PGY+ D  S     KL ++Y  H QKD L + G++ FPNL+FEY+++ FG +LNDT  +  V++TN S V   F W F+
Sbjct: 1006 FSYIYEEGVDMETQSQPLTLTNVCELPLSFVLRTQVPFSVDMWESMLQPKESVELNVEFYPGYKDDHMSRSINGKLVISYTGHPQKDSLDLRGEIGFPNLEFEYSKIDFGTILNDTQKSMHVKVTNVSKVPTVFHWVFI 1144          
BLAST of mRNA_H-elongata_contig20385.5800.1 vs. uniprot
Match: A0A1V9Z071_9STRA (Hydrocephalus-inducing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z071_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.690e-31
Identity = 63/139 (45.32%), Postives = 87/139 (62.59%), Query Frame = 1
Query:   43 FSHVWDSDVPMVPSSKSLQMTNNGLLPLGFTVKTQPPFSVDIAEHSLKVGESGELSVGFDPGYRGDSQSCRYESKLSVTYRNHSQKDGLPVVGDVAFPNLDFEYTRVSFGCVLNDTTMTKLVRITNSSIVDCAFRWSFL 459
            FS+++   V M   S+ L +TN   LPL F ++TQ PFSVD  E  L+  E  EL+V F PGY+ D  S     KL  +Y  H QKD L + G++ FPNL+FE++R+ FGC+LNDT  + LV++TN S V+  F W F+
Sbjct: 1011 FSYIYAQGVEMETQSQPLTLTNACELPLSFVLRTQVPFSVDTWEAVLQPKEKMELNVEFYPGYKDDHLSRVINGKLVTSYTGHPQKDSLDLRGEIGFPNLEFEFSRIDFGCILNDTQKSMLVKVTNVSKVETQFHWVFI 1149          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20385.5800.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJY6_ECTSI3.200e-7375.16Hydrocephalus-inducing protein, Hydin-like protein... [more]
A0A6H5K5Z3_9PHAE7.390e-6368.63MSP domain-containing protein n=1 Tax=Ectocarpus s... [more]
F0Y448_AURAN8.380e-4348.68Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2QVW6_9STRA1.550e-4249.02Hypothetical protein n=2 Tax=Triparma pacifica Tax... [more]
A0A835YJI6_9STRA1.550e-3343.03Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A485LSA9_9STRA1.620e-3344.16Aste57867_25117 protein n=1 Tax=Aphanomyces stella... [more]
A0A7S1CHV8_9STRA5.280e-3350.00Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A8K1CD31_PYTOL2.640e-3242.95Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1V9Y885_9STRA1.680e-3144.60Hydrocephalus-inducing protein (Fragment) n=1 Tax=... [more]
A0A1V9Z071_9STRA1.690e-3145.32Hydrocephalus-inducing protein n=1 Tax=Achlya hypo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20385contigH-elongata_contig20385:442..2048 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score249.6
Seed ortholog evalue9.4e-64
Seed eggNOG ortholog2880.D7FJY6
Preferred nameHYDIN
KEGG koko:K17570
GOsGO:0000226,GO:0001578,GO:0002064,GO:0003341,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005929,GO:0005930,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008150,GO:0009888,GO:0009987,GO:0016043,GO:0021591,GO:0022607,GO:0030030,GO:0030031,GO:0030154,GO:0030855,GO:0032501,GO:0032502,GO:0032838,GO:0035082,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044463,GO:0044464,GO:0044782,GO:0048468,GO:0048513,GO:0048731,GO:0048856,GO:0048869,GO:0060271,GO:0060322,GO:0060429,GO:0060438,GO:0060541,GO:0070925,GO:0071840,GO:0097014,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1904158,GO:1990716,GO:1990718
EggNOG free text desc.axonemal central apparatus assembly
EggNOG OGs28HT9@1,2QQ4F@2759
Ec32 ortholog descriptionPapD-like
Ec32 orthologEc-18_003160.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01009
Hectar predicted targeting categoryother localisation
Exons4
Model size459
Cds size459
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20385.5800.1prot_H-elongata_contig20385.5800.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig20385 442..2048 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930145.4043636-CDS-H-elongata_contig20385:441..5401622930145.4043636-CDS-H-elongata_contig20385:441..540Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20385 442..540 -
1691679298.388426-CDS-H-elongata_contig20385:441..5401691679298.388426-CDS-H-elongata_contig20385:441..540Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20385 442..540 -
1622930145.4178185-CDS-H-elongata_contig20385:924..10571622930145.4178185-CDS-H-elongata_contig20385:924..1057Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20385 925..1057 -
1691679298.399252-CDS-H-elongata_contig20385:924..10571691679298.399252-CDS-H-elongata_contig20385:924..1057Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20385 925..1057 -
1622930145.4302287-CDS-H-elongata_contig20385:1482..15621622930145.4302287-CDS-H-elongata_contig20385:1482..1562Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20385 1483..1562 -
1691679298.408728-CDS-H-elongata_contig20385:1482..15621691679298.408728-CDS-H-elongata_contig20385:1482..1562Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20385 1483..1562 -
1622930145.444937-CDS-H-elongata_contig20385:1901..20481622930145.444937-CDS-H-elongata_contig20385:1901..2048Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20385 1902..2048 -
1691679298.417514-CDS-H-elongata_contig20385:1901..20481691679298.417514-CDS-H-elongata_contig20385:1901..2048Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20385 1902..2048 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig20385.5800.1

>prot_H-elongata_contig20385.5800.1 ID=prot_H-elongata_contig20385.5800.1|Name=mRNA_H-elongata_contig20385.5800.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=153bp
FVVPLLNFCQTEFHFSHVWDSDVPMVPSSKSLQMTNNGLLPLGFTVKTQP
PFSVDIAEHSLKVGESGELSVGFDPGYRGDSQSCRYESKLSVTYRNHSQK
DGLPVVGDVAFPNLDFEYTRVSFGCVLNDTTMTKLVRITNSSIVDCAFRW
SFL
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mRNA from alignment at H-elongata_contig20385:442..2048-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig20385.5800.1 ID=mRNA_H-elongata_contig20385.5800.1|Name=mRNA_H-elongata_contig20385.5800.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1607bp|location=Sequence derived from alignment at H-elongata_contig20385:442..2048- (Himanthalia elongata Himel1 dioecious)
TTCGTTGTCCCACTCCTGAACTTCTGCCAAACGGAATTCCACTTCAGCCA CGTGTGGGACTCCGACGTACCCATGGTGCCGTCTTCGAAAAGCCTTCAAA TGACAAACAACGGGCTGTTGCCGCTTGGTTTTACGGTCAAGACGCAGGTA CATGACGCAACAAATTGTGACAACGGAAGATGGTAGGGAAGACGGAGCAA CGCGCTTTTCGACAACTACGTATTATACAGAGCCTGGAAGGCGTAATAGA GAGGTCTCGGGCGGTTCACTTGCTCGGGACGGCACCAAGCGGGAGGCATC GACGCCCACATGTTATGGGGAAAATGTTGGCTCATAAGTCAGCGAATGCT CGGCCTCCAAGGGTATCATGGACATTCATCAATCGTGTACCTATCGATGA TCTTGTCTAAATTTATCTCTTTGTAGCCACAGATATTTACTGTTGCCGTG TTTGCTACACCCCCCCTCTCCCCATTTCCCACTCAGCCCCCGTTCAGCGT CGACATCGCGGAGCACTCGCTTAAAGTAGGGGAAAGTGGAGAGCTAAGCG TTGGCTTTGACCCAGGGTGAGTGTACAAGTCCGTGCGAAGGTGGCCCTCT GCTTTTCTCCGTCGAACGAAAGCGAACCCTGAGTTGCGACGCTAGGTTCT CTATTGACGTGTATTGACCTAACGTTGCCACGTTTTTTTGCGTACGGACG GACGGGATACGAATACAATACACGAAATAATATTTGGGGGGGGTAAAAGA GGGCTATCTCCCCCAACGGGCTGGAGATGCATTTATGAGCCTACTACAAC CCTGGTCTCCATGAGATACCTCGGGTGAACAGCACTATCAGGCGATATGA CCTCCTCCGGTTTCAGTTTACTGTCATCGGCCGACGAAACCCTGTTACCA TCACAACTACGCCCCAATTGCGTGGGAATGAACTATCAACTTTCGACGGT GGCCTTGCATGCTCCTCTTGCTCCCAAATAATCAAAACAAGGTACCGCGG GGACAGCCAAAGCTGCCGATATGAGTCTAAGCTATCGGTCACGTATCGAA ACCATTCGCAAAAGGACGGCCTTCCTGTCGTGGGAGACGTTGCCTTTCCC AACCTCGATTTCGAGTACACGAGGGTAAGACGATCGTTCGCCTGAGAGGT GCGCTCGCTCGCGCACCATAACGATCCTAGCCCTACCTCCGGAAAAAAGA ACAGAGCGAATAGCGTTGGCCTCGGAAGTCTGAAATGTGTTCATTTATCG TAAGAACGATGTAGCCTTCAGCCAAGCTTGGAGTTCGTCCTTCACTGGAA GATACTTTTAGGAACATAGACCACGGGAAGTATTTGAGCACCCTTCACCC AGACGCGCACACCTCGGACTTCCTCAGACCCTCGGTGTGCCATGCGCCGC ACCTCGTTACAGTTGTAAAGCTCTAACCCTAACTATTAGTCTGCGGTTTG TTTTTCAGCGCACCATCGACTCTTTGAGCACGTATTTATTGTTTGCGCGC ACGCACAGGTGAGCTTCGGGTGCGTCCTGAACGATACCACGATGACGAAA CTCGTGCGCATCACCAACAGCTCCATCGTGGACTGTGCCTTCAGATGGTC GTTCTTG
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Coding sequence (CDS) from alignment at H-elongata_contig20385:442..2048-

>mRNA_H-elongata_contig20385.5800.1 ID=mRNA_H-elongata_contig20385.5800.1|Name=mRNA_H-elongata_contig20385.5800.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=918bp|location=Sequence derived from alignment at H-elongata_contig20385:442..2048- (Himanthalia elongata Himel1 dioecious)
TTCGTTGTCCCACTCCTGAACTTCTGCCAAACGGAATTCCACTTCAGCCA
CGTGTGGGACTCCGACGTACCCATGGTGCCGTCTTCGAAAAGCCTTCAAA
TGACAAACAACGGGCTGTTGCCGCTTGGTTTTACGGTCAAGACGCAGTTC
GTTGTCCCACTCCTGAACTTCTGCCAAACGGAATTCCACTTCAGCCACGT
GTGGGACTCCGACGTACCCATGGTGCCGTCTTCGAAAAGCCTTCAAATGA
CAAACAACGGGCTGTTGCCGCTTGGTTTTACGGTCAAGACGCAGCCCCCG
TTCAGCGTCGACATCGCGGAGCACTCGCTTAAAGTAGGGGAAAGTGGAGA
GCTAAGCGTTGGCTTTGACCCAGGCCCCCGTTCAGCGTCGACATCGCGGA
GCACTCGCTTAAAGTAGGGGAAAGTGGAGAGCTAAGCGTTGGCTTTGACC
CAGGGTACCGCGGGGACAGCCAAAGCTGCCGATATGAGTCTAAGCTATCG
GTCACGTATCGAAACCATTCGCAAAAGGACGGCCTTCCTGTCGTGGGAGA
CGTTGCCTTTCCCAACCTCGATTTCGAGTACACGAGGGTACCGCGGGGAC
AGCCAAAGCTGCCGATATGAGTCTAAGCTATCGGTCACGTATCGAAACCA
TTCGCAAAAGGACGGCCTTCCTGTCGTGGGAGACGTTGCCTTTCCCAACC
TCGATTTCGAGTACACGAGGGTGAGCTTCGGGTGCGTCCTGAACGATACC
ACGATGACGAAACTCGTGCGCATCACCAACAGCTCCATCGTGGACTGTGC
CTTCAGATGGTCGTTCTTGGTGAGCTTCGGGTGCGTCCTGAACGATACCA
CGATGACGAAACTCGTGCGCATCACCAACAGCTCCATCGTGGACTGTGCC
TTCAGATGGTCGTTCTTG
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