mRNA_H-elongata_contig20265.5743.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig20265.5743.1 vs. uniprot
Match: D8LET7_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LET7_ECTSI) HSP 1 Score: 476 bits (1224), Expect = 5.470e-165 Identity = 240/316 (75.95%), Postives = 271/316 (85.76%), Query Frame = 1
Query: 1 FGRQTLASLLAGLAVAANFESAGAASNKLQISNTGSGARVNKDPISLLQWGLPIDCKPARQLQETMEAIKLDLFQKNWSRAASNCQRARNVISKNKAQLLKAVGSTNEAQTTNILAEMDKSIEYLGNIVQSEGAGVVLENAKLDEASPVHADIVSNVGKVEAMMVPADYASKLEANIPSDFSGLPRLLGRATAEFVLVKPGGQKFDVGGVLYDKVRLAMTLDGYTAPVTAGTIVDLIQRGGYYNNLPITRSDGFVVQTGDPDPEGDVHDFFPAGSSEARKIPLEIAVTEDKFPMYSVTTEDDGRGYAATKLPFKVH 948
FG+QT+A+LLAG+ AANFESA AA NKLQ+S+T SG+RVNKDPISLLQWGLPIDCKPARQLQE +EA KLDLFQKNWSRA SNC +A++ +S NKA +LKAVGS+NEA T ++A++D + L IVQ +GAGVVLE AKLDEA PVHA IVSNVG +EAMMVP DY KLEANIP DF LPRLLGRA+ EFV+ KP G+KFDV GVLYDKVRL M LDG+TAPVTAGTI+DL+QRG YY N+PITRSDGFVVQTGDPDPEG+VHDFFP GS ARKIPLEIAVTEDK PMYSVTTEDDGRGYAATKLPF+ +
Sbjct: 65 FGKQTIATLLAGVTAAANFESANAA-NKLQVSSTASGSRVNKDPISLLQWGLPIDCKPARQLQEVVEAAKLDLFQKNWSRAVSNCSKAKSAMSGNKAAILKAVGSSNEAGATKLMADIDMGLGALQRIVQDDGAGVVLEKAKLDEAYPVHATIVSNVGNLEAMMVPPDYTKKLEANIPGDFDSLPRLLGRASVEFVMEKPKGEKFDVAGVLYDKVRLTMVLDGFTAPVTAGTIIDLVQRG-YYKNMPITRSDGFVVQTGDPDPEGNVHDFFPPGSDTARKIPLEIAVTEDKLPMYSVTTEDDGRGYAATKLPFQAY 378
BLAST of mRNA_H-elongata_contig20265.5743.1 vs. uniprot
Match: A0A836CBT3_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT3_9STRA) HSP 1 Score: 300 bits (769), Expect = 9.820e-97 Identity = 156/287 (54.36%), Postives = 204/287 (71.08%), Query Frame = 1
Query: 94 SNTGSGARVNKDPISLLQWGLPIDCKPARQLQETMEAIKLDLFQKNWSRAASNCQRARNVISKNKAQLLKAVGSTNEAQTTNILAEMDKSIEYLGNIVQS-EGAGVVLENAKLDEASPVHADIVSNVGKVEAMMVPADYASKLEANIPSDFSGLPRLLGRATAEFVLVKPG-GQKFDVGGVLYDKVRLAMTLDGYTAPVTAGTIVDLIQRGGYYNNLPITRSDGFVVQTGDPDPEGDVHDFFPAGSSEARKIPLEIAVTEDKFPMYSVTTEDDGRGYAATKLPFKVH 948
SNTGSG+RVNKDP SLL+ GLPI+CKP LQE ++++K D ++K+WSRA ++C++A ++SK + LL AV T +A+ +L + + L I++S EG G V E KLD+A ++ VG ++ +MVPADY +LEANIPS+F LPRLLGRAT EFVL KP G KFDV G LYD+ +L M +DGY AP+TAG +DL+Q+G +Y L ITRSDGFVVQTGDPDPEG H + E R +PLEI V+ DK+PMYS+TTEDD RGYA+T LPF+ +
Sbjct: 52 SNTGSGSRVNKDPQSLLRQGLPINCKPVFDLQEAIDSVKYDTYRKDWSRALNDCKQAGGIVSKKRKDLLAAVRPTEKAKGEQLLQTILDKLTPLEAILKSKEGTGTVAERIKLDDAYAAQEEVADAVGSLQELMVPADYVKELEANIPSEFDKLPRLLGRATVEFVLEKPTKGDKFDVEGTLYDQAKLVMVIDGYNAPITAGCFLDLVQKG-FYKGLAITRSDGFVVQTGDPDPEGTKHGY------EDRIVPLEIFVSGDKYPMYSLTTEDDSRGYASTILPFQAY 331
BLAST of mRNA_H-elongata_contig20265.5743.1 vs. uniprot
Match: W7TQJ8_9STRA (Peptidylprolyl isomerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQJ8_9STRA) HSP 1 Score: 256 bits (653), Expect = 1.310e-78 Identity = 133/283 (47.00%), Postives = 190/283 (67.14%), Query Frame = 1
Query: 106 SGARVNKDPISLLQWGLPIDCKPARQLQETMEAIKLDLFQKNWSRAASNCQRARNVISKNKAQLLKAVGSTNEAQTTNILAEMDKSIEYL-GNIVQSEGAGVVLENAKLDEASPVHADIVSNVGKVEAMMVPADYASKLEANIPSDFSGLPRLLGRATAEFVLVK-PGGQKFDVGGVLYDKVRLAMTLDGYTAPVTAGTIVDLIQRGGYYNNLPITRSDGFVVQTGDPDPEGDVHDFFPAGSSEARKIPLEIAVTEDKFPMYSVTTEDDGRGYAATKLPFKVH 948
+G+RVNKD SLL++GLPI+ K AR+LQE +E +K ++ K + + QRA+++++ + +LLKAV + + +L E++ +++ L + G G E AKLD A D V +VE +MVPA Y ++P +FS LP+L GRA + VL K G+KF++ G LYD +++ M +DG+ APVTAG VDL+Q+G +YNN PITRSDGFVVQ GDPDP+G+VH + P GS + R IPLEI V +D+ PMY +TTEDDGRGY+AT+LPF+ +
Sbjct: 110 AGSRVNKDAESLLRYGLPINSKEARELQEAVEGVKENIRGKRLNEGKKDVQRAKSILASKREKLLKAVRPDGKERAQELLKELEGNLDELTATFAEDAGRGSEQERAKLDLAYKQQLDASRAVTEVEELMVPAGYT----VSVPEEFSNLPQLQGRAEVDMVLKKGEAGEKFEIKGKLYDSIQVKMVIDGFNAPVTAGNFVDLVQKG-FYNNRPITRSDGFVVQYGDPDPQGEVHGYVPFGSKDVRTIPLEIFVAQDESPMYGMTTEDDGRGYSATRLPFQAY 387
BLAST of mRNA_H-elongata_contig20265.5743.1 vs. uniprot
Match: A0A6T5MD62_HETAK (Peptidylprolyl isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5MD62_HETAK) HSP 1 Score: 254 bits (649), Expect = 4.180e-78 Identity = 142/288 (49.31%), Postives = 190/288 (65.97%), Query Frame = 1
Query: 100 TGSGARVNKDPISLLQWGLPIDCKPARQLQETMEAIKLDLFQKNWSRAASNCQRARNVISKNKAQLLKAVGSTNEAQTTNILAEMDKSIEYLGNIVQS-EGAGVVLENAKLDEASPVHADIVSNVGKVEAMMVPADYASKLEANIPSDFSGLPRLLGRATAEFVLVK-PGGQ--KFDVGGVLYDKVRLAMTLDGYTAPVTAGTIVDLIQRGGYYNNLPITRSDGFVVQTGDPDPEGD-VHDFFPAGSSEARKIPLEIAVTEDKFPMYSVTTEDDGRGYAATKLPFKVH 948
TGSG RVNKDP SLL++GLPI+ K AR+LQ +E +K D+ K W + Q+AR V+ K +A+LLK V + +A+ + E+ ++ L I+ S EG G V E KLD+A + VG +E +MVP ++A + +P +++GLPRL GRAT E VLVK P + KFDV G LYD+ RL +TLDGY APV+AGT++DL+ +G +Y L + RSDGFVVQTGDPDPE D V + P GS + R +PLEIAV D +Y TTEDDGRG+A T LPF+ +
Sbjct: 98 TGSGTRVNKDPESLLRYGLPINSKKARELQAAVEGVKSDILIKRWGAGIAGVQKARTVLGK-EAELLKEVRPSAQAEGKKAIQELKDLLDPLEQILASKEGTGTVQEREKLDKAYAAQDKVARAVGALEELMVPENFARE----VPEEYAGLPRLNGRATVEMVLVKGPEDEDGKFDVEGTLYDECRLVLTLDGYNAPVSAGTVMDLVDKG-FYKGLTVIRSDGFVVQTGDPDPESDKVDGYTPPGSKKVRTVPLEIAVAGDPELLYGATTEDDGRGFAQTVLPFQAY 379
BLAST of mRNA_H-elongata_contig20265.5743.1 vs. uniprot
Match: A0A0G4EJ74_VITBC (Peptidylprolyl isomerase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EJ74_VITBC) HSP 1 Score: 218 bits (556), Expect = 4.330e-64 Identity = 123/284 (43.31%), Postives = 178/284 (62.68%), Query Frame = 1
Query: 106 SGARVNKDPISLLQWGLPIDCKPARQLQETMEAIKLDLFQKNWSRAASNCQRARNVISKNKAQLLKAVGSTNEAQTTNILAEMDKSIEYLGNIVQSEGA-GVVLENAKLDEASPVHADIVSNVGKVEAMMVPADYASKLEANIPSDFSGLPRLLGRATAEFVLVKPGGQKFDVGGVLYDKVRLAMTLDGYTAPVTAGTIVDLIQRGGYYNNLPITRSDGFVVQTGDPD--PEGDVHDFFPAGSSEARKIPLEIAVTEDKFPMYSVTTEDDGRGYAATKLPFKVH 948
+G+RVNKD SLL++GLPI K LQ +EA+K D+ K + A ++ +AR +I +A LLKA+ +E + +LA + S++ L ++ + G E AKLD+ + I + + A+MVP +Y + +P +F+ LP+L GRA E V+ K G KFD+ G LYD+ +L M +DG+ APVTAG VDL+ +G +Y+++ I+RSDGFVVQTG PD PEG + P G+ E R++PLEI V D PMY TTE+DGRG+AAT LPF+ +
Sbjct: 109 AGSRVNKDADSLLRYGLPIQDKDVTALQVELEAVKGDIPVKRFDSAVNHLNKARVLIRDKEASLLKAIRPKSEDKAKELLASIGASVDPLIEAIREPASRGSPQEAAKLDKCLELQGGIADKMTALMALMVPENY----KVPVPQEFASLPQLQGRAKVEMVVKKADGSKFDLEGRLYDEAKLVMVVDGWNAPVTAGNFVDLVSKG-FYDSMKISRSDGFVVQTGKPDSGPEG----YVPTGAKEPRRVPLEIFVKGDNAPMYGETTEEDGRGFAATTLPFQAY 383
BLAST of mRNA_H-elongata_contig20265.5743.1 vs. uniprot
Match: M1USH1_CYAM1 (Peptidylprolyl isomerase n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1USH1_CYAM1) HSP 1 Score: 211 bits (538), Expect = 1.590e-61 Identity = 125/283 (44.17%), Postives = 173/283 (61.13%), Query Frame = 1
Query: 100 TGSGARVNKDPISLLQWGLPIDCKPARQLQETMEAIKLDLFQKNWSRAASNCQRARNVISKNKAQLLKAVGSTNEAQTTNILAEMDKSIEYLGNIVQSEGAGVVLENAKLDEASPVHADIVSNVGKVEAMMVPADYASKLEANIPSDFSGLPRLLGRATAEFVLVKPGGQ----KFDVGGVLYDKVRLAMTLDGYTAPVTAGTIVDLIQRGGYYNNLPITRSDGFVVQTGDPDPEGDVHDFFPAGSSEARKIPLEIAVTEDKFPMYSVTTEDDGRGYAATKLP 936
+G+ VNKDP SLL+W LPID + RQLQ +EA +L QK WS+ +S+ ++A + S+N LL V EA+T AE +++ L +++ S A ++A+ E+ + D + VG +E + V +P ++S LP+LLGRAT EFVL K G + +FD+ G LYD+ RL M +DGY+APVT G VDL+ RG +YN L I RSDGFV+QTGDP+PEG +H F + +++ R IPLEI D P+Y T EDDGRG AT LP
Sbjct: 110 SGASGVVNKDPESLLRWALPIDNEHLRQLQTELEATLRELRQKKWSQISSHVRKASQMTSRNANDLLADVS---EAKT----AEAQRALSTLQSMLGSLQASADAKDAENFES--MAKDALRQVGTLEELSVKG-----FPFQVPEEYSHLPQLLGRATVEFVLRKSGEEGSPKQFDIDGNLYDRARLVMVVDGYSAPVTGGNFVDLVSRG-FYNGLRIIRSDGFVIQTGDPEPEGKIHGFIDSKTNQERTIPLEIFAKGDPMPLYGTTLEDDGRGGQATVLP 377
BLAST of mRNA_H-elongata_contig20265.5743.1 vs. uniprot
Match: A0A7R9U5X5_9STRA (Peptidylprolyl isomerase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5X5_9STRA) HSP 1 Score: 206 bits (523), Expect = 8.440e-60 Identity = 115/285 (40.35%), Postives = 168/285 (58.95%), Query Frame = 1
Query: 94 SNTGSGARVNKDPISLLQWGLPIDCKPARQLQETMEAIKLDLFQKNWSRAASNCQRARNVISKNKAQLLKAVGSTNEAQTTNILAEMDKSIEYLGNIVQSEGAGVVLENAKLDEASPVHADIVSNVGKVEAMMVPADYASKLEANIPSDFSGLPRLLGRATAEFVLVK-PGGQKFDVGGVLYDKVRLAMTLDGYTAPVTAGTIVDLIQRGGYYNNLPITRSDGFVVQTGDP-DPEGDVHDFFPAGSSEARKIPLEIAVTEDKFPMYSVTTEDDGRGYAATKLPFK 942
S + +G+RVNKD SLL++ LP+ K R+LQ +E +K + + WS S+ Q+A V+ A++L AV + L + ++E L + ++GAG V KL + + VG +E M+P +Y +P +++ LP+L GRA +FV K G+KFD+ GVL D V L M DGY +P+TAG VDL+ +G +YNN+ I R+DGFVVQTG+P D + + P GSSE R+IPLEIA+ DK P YS T ++DGRG ++LPF+
Sbjct: 55 SASAAGSRVNKDAESLLRYALPVKNKEVRELQAAVEDVKGQIAIRQWSAGTSDVQKAMGVLKSKAAKILAAVPQEKQKAVQGQLDMLGGTLEDLRVALAADGAGEVKGETKLKTCYDLQDKAANTVGAIEENMIPTNY----HVQVPKEYNNLPQLDGRAKVQFVFKKGEPGEKFDLDGVLVDTVTLEMVADGYNSPITAGNFVDLVHKG-FYNNMAINRADGFVVQTGEPKDATEKTNGYVPPGSSEVRRIPLEIALLADKDPFYSTTIDEDGRGGEPSRLPFQ 334
BLAST of mRNA_H-elongata_contig20265.5743.1 vs. uniprot
Match: A0A6V2I0H8_9STRA (Peptidylprolyl isomerase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2I0H8_9STRA) HSP 1 Score: 201 bits (510), Expect = 2.700e-57 Identity = 126/291 (43.30%), Postives = 171/291 (58.76%), Query Frame = 1
Query: 100 TGSGARVNKDPISLLQWGLPIDCKPARQLQETMEAIKLDLFQKNWSRAASNCQRARNVISKNKAQLLKAVGSTNEAQ-TTNILAEMDKSIEYLG-NIVQSEGA--GVVLENAKLDEASPVHADIVSNVGKVEAMMVPADYASKLEANIPSDFSGLPRLLGRATAEFVLVKPGGQKFDVGGVLYDKVRLAMTLDGYTAPVTAGTIVDLIQRGGYYNNLPITRSDGFVVQTGDPDPEGDVHDFFP-------AGSSEARKIPLEIAVTEDKFPMYSVTTEDDGRGYAATKLPF 939
+G+G+RVNKD SLL++GLPI+ K R+LQ +E IK D+ K S A ++AR I K+ K S +A T IL EM+ +++ L ++ S+GA G E LD A + I + +E MVPA+Y + +PSD+ LP+L GRAT EF LVKP G FD+ G + K + M +DGYT+PVT G VDL+Q+G +Y N+ I+RSDGFVVQ+G+P EG + AG + R IP EIA+ DK P+Y T ED+GRG AT LPF
Sbjct: 107 SGTGSRVNKDAESLLRYGLPINNKEVRKLQVVIEEIKQDIGSKRKSAALDGVKKARTAI---KSTASKMTASCRDANFCTTILNEMNDNLDPLDQSLKDSQGAQNGSEQERKALDAAYQSQSKIAKQLTALEENMVPANYVTP----VPSDYDDLPQLKGRATVEFELVKPDGAPFDIEGTNFPKANMVMVIDGYTSPVTGGNFVDLVQKG-FYTNMKISRSDGFVVQSGEPS-EGPAIGYVGKPSKSVGAGKNGERLIPCEIAIRGDKGPIYETTIEDEGRGGEATVLPF 388
BLAST of mRNA_H-elongata_contig20265.5743.1 vs. uniprot
Match: A0A7J7IIK0_9RHOD (Peptidylprolyl isomerase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IIK0_9RHOD) HSP 1 Score: 197 bits (501), Expect = 1.930e-56 Identity = 110/281 (39.15%), Postives = 160/281 (56.94%), Query Frame = 1
Query: 118 VNKDPISLLQWGLPIDCKPARQLQETMEAIKLDLFQKNWSRAASNCQRARNVISKNKAQLLKAVGSTNEAQTTNILAEMDKSIEYLGNIVQSEGAGVVLENAKLDEASPVHADIVSNVGKVEAMMVPADYASKLEANIPSDFSGLPRLLGRATAEFVLVKPGG----QKFDVGGVLYDKVRLAMTLDGYTAPVTAGTIVDLIQRGGYYNNLPITRSDGFVVQTGDPDPEGDVHDFFPAGSSEARKIPLEIAVTEDKFPMYSVTTEDDGRGYAATKLPFKVH 948
VNKDP SLL+W LP++ + RQLQ +EA +L QK W + + +++ ++ + +LL + + A++ L M IE L + V ++ ++ + D + VG +E + V + +P ++S LP+LLGR T E +L K G ++FD+ G LYDK RL + +DGY+APVT G +DL+ RG +Y+ L I RSDGFVVQ GDP+P+G VH F A + E R IPLEI D P+Y +T EDDGRG AT LP +
Sbjct: 78 VNKDPESLLRWALPMNNQSLRQLQAELEAAVRELRQKKWPQIGDHVRKSSLLVQRQADKLLADIPESKRAESQQTLGTMQSMIESLQSFVDAKDG---------EKFESLARDTLRQVGLLEELSV-----KEFPFQVPEEYSHLPQLLGRGTVEIILRKSGENGSPKQFDIDGNLYDKARLVLVIDGYSAPVTGGNFMDLVSRG-FYDGLRIIRSDGFVVQAGDPEPDGKVHGFIDAKTGETRTIPLEIFAKGDTMPLYGMTLEDDGRGGQATVLPLTAY 343
BLAST of mRNA_H-elongata_contig20265.5743.1 vs. uniprot
Match: K0RVF2_THAOC (Peptidylprolyl isomerase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RVF2_THAOC) HSP 1 Score: 197 bits (500), Expect = 2.710e-55 Identity = 120/289 (41.52%), Postives = 171/289 (59.17%), Query Frame = 1
Query: 100 TGSGARVNKDPISLLQWGLPIDCKPARQLQETMEAIKLDLFQKNWSRAASNCQRARNVISKNKAQLLKAVGSTNEAQT-TNILAEMDKSIEYLG-NIVQSEG--AGVVLENAKLDEASPVHADIVSNVGKVEAMMVPADYASKLEANIPSDFSGLPRLLGRATAEFVLVKPGGQKFDVGGVLYDKVRLAMTLDGYTAPVTAGTIVDLIQRGGYYNNLPITRSDGFVVQTGDPDPEGDVHDFFP-----AGSSEARKIPLEIAVTEDKFPMYSVTTEDDGRGYAATKLPF 939
+GSG RVNKDP SLL++GLPI K R LQ+ +E I+ D+ K S A + ++A+ +I+ + Q+ S +AQ ++ILA M + L ++ +S+ AG E LD++ V I + ++ M+P Y + +PSD+ LP+L GRAT E ++ KP G FD+ G L+ + ++ M +DGYTAPVT G VDL+++G +YN++ I RSDGFVVQTG+P E + + P AG R IP EI VT DK P Y T ED+GRG AT LPF
Sbjct: 166 SGSGTRVNKDPESLLRYGLPIKNKEVRTLQKNIEEIRNDIASKRKSAALDDAKKAKGIINSKEKQM---TASCRDAQVCSDILANMKTEMTPLEVSLKESQDFLAGSEQERKALDDSYKVQDAIQKELTTLQEQMIPPGYVTP----VPSDYDDLPQLEGRATVEMIVKKPDGSNFDIEGSLFKEAKMKMIIDGYTAPVTGGNFVDLVKKG-FYNDMDIQRSDGFVVQTGNPKGEAEGYVGTPSKSVGAGKHGERLIPSEIFVTGDKAPFYETTIEDEGRGGEATVLPF 446 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20265.5743.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig20265.5743.1 >prot_H-elongata_contig20265.5743.1 ID=prot_H-elongata_contig20265.5743.1|Name=mRNA_H-elongata_contig20265.5743.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=316bp FGRQTLASLLAGLAVAANFESAGAASNKLQISNTGSGARVNKDPISLLQWback to top mRNA from alignment at H-elongata_contig20265:3002..6894+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig20265.5743.1 ID=mRNA_H-elongata_contig20265.5743.1|Name=mRNA_H-elongata_contig20265.5743.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3893bp|location=Sequence derived from alignment at H-elongata_contig20265:3002..6894+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig20265:3002..6894+ >mRNA_H-elongata_contig20265.5743.1 ID=mRNA_H-elongata_contig20265.5743.1|Name=mRNA_H-elongata_contig20265.5743.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1896bp|location=Sequence derived from alignment at H-elongata_contig20265:3002..6894+ (Himanthalia elongata Himel1 dioecious)back to top |