mRNA_H-elongata_contig20203.5716.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig20203.5716.1
Unique NamemRNA_H-elongata_contig20203.5716.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig20203.5716.1 vs. uniprot
Match: A0A126WXS3_9PHAE (Putative LOV domain-containing protein n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A126WXS3_9PHAE)

HSP 1 Score: 285 bits (728), Expect = 1.910e-93
Identity = 134/166 (80.72%), Postives = 145/166 (87.35%), Query Frame = 1 
Query:   49 MGALQSAPPVSSGTPFVPKKMLSVKDTIIVDMLSGPDHSKTVSYCVTDPDLNDNPIIFCSDAFAQLSGYLREEVEGRNCRFFQGAKTDPSDVAKIREAVKEKREACLCLLNYKKDGSTFHNQFFMTPLFDGGGDLAYYLGIQVQVKTPGAGQEPKNPGWVYTMGLH 546
            MGA QSA     GTPFVP+K+LSVKDTI+VDMLSGPDHSK +SYCVTDPDL+DNPIIFCSD FA  +GY +EEVEGRNCRF QGAKTDP DVAKIR AV EKREACLCLLNYKKDGSTF+NQFF+TPLFD  G LAY+LGIQVQVKT   GQEP+NPGWVYTMGLH
Sbjct:    1 MGAEQSASTEPLGTPFVPRKLLSVKDTILVDMLSGPDHSKNISYCVTDPDLHDNPIIFCSDGFASFTGYDKEEVEGRNCRFLQGAKTDPGDVAKIRSAVSEKREACLCLLNYKKDGSTFNNQFFLTPLFDAEGTLAYFLGIQVQVKTGDKGQEPENPGWVYTMGLH 166
[Close]
BLAST of mRNA_H-elongata_contig20203.5716.1 vs. uniprot
Match: A0A6H5L122_9PHAE (PAS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L122_9PHAE)

HSP 1 Score: 283 bits (723), Expect = 1.020e-92
Identity = 131/166 (78.92%), Postives = 146/166 (87.95%), Query Frame = 1 
Query:   49 MGALQSAPPVSSGTPFVPKKMLSVKDTIIVDMLSGPDHSKTVSYCVTDPDLNDNPIIFCSDAFAQLSGYLREEVEGRNCRFFQGAKTDPSDVAKIREAVKEKREACLCLLNYKKDGSTFHNQFFMTPLFDGGGDLAYYLGIQVQVKTPGAGQEPKNPGWVYTMGLH 546
            MG  QSA   S+GTPFVP K+LSVKDTI+VDM++GPD+S+ VSYCVTDPDL DNPIIFCSD FA+ +GY +EEVEGRNCRF QGAKTDP D AKIREA+KE +EACLCLLNYKKDGSTFHNQFF+TPLFD GG LAY+LGIQVQVKT   GQEP+NPGWVYTMGLH
Sbjct:    1 MGGAQSAE--SAGTPFVPNKILSVKDTILVDMMNGPDNSRVVSYCVTDPDLEDNPIIFCSDGFAEFTGYAKEEVEGRNCRFLQGAKTDPGDTAKIREAIKENKEACLCLLNYKKDGSTFHNQFFLTPLFDEGGTLAYFLGIQVQVKTASDGQEPENPGWVYTMGLH 164
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BLAST of mRNA_H-elongata_contig20203.5716.1 vs. uniprot
Match: A0A126X2E3_9PHAE (Putative LOV domain-containing protein n=2 Tax=Scytosiphon TaxID=27966 RepID=A0A126X2E3_9PHAE)

HSP 1 Score: 277 bits (709), Expect = 1.360e-90
Identity = 129/166 (77.71%), Postives = 144/166 (86.75%), Query Frame = 1 
Query:   49 MGALQSAPPVSSGTPFVPKKMLSVKDTIIVDMLSGPDHSKTVSYCVTDPDLNDNPIIFCSDAFAQLSGYLREEVEGRNCRFFQGAKTDPSDVAKIREAVKEKREACLCLLNYKKDGSTFHNQFFMTPLFDGGGDLAYYLGIQVQVKTPGAGQEPKNPGWVYTMGLH 546
            MG  QSA P  SGTPF P K+LSVKDTI+VDM++GP++S+ VSYCVTDPDL DNPIIFCSD FA+ +GY ++EVEGRNCRF QGAKTDP D+ KIREAVKEK+EACLCLLNYKKDGS FHNQFF+TPLFD  G LAYYLGIQVQVKT   GQEP+NPGWVYTMGLH
Sbjct:    1 MGGAQSAEP--SGTPFKPAKLLSVKDTILVDMMNGPNNSRIVSYCVTDPDLEDNPIIFCSDGFAEFTGYAKDEVEGRNCRFLQGAKTDPGDITKIREAVKEKKEACLCLLNYKKDGSIFHNQFFLTPLFDAEGKLAYYLGIQVQVKTGADGQEPENPGWVYTMGLH 164
[Close]
BLAST of mRNA_H-elongata_contig20203.5716.1 vs. uniprot
Match: A0A126WVC6_9PHAE (Putative LOV domain-containing protein n=2 Tax=Ectocarpales TaxID=2877 RepID=A0A126WVC6_9PHAE)

HSP 1 Score: 275 bits (704), Expect = 8.600e-90
Identity = 128/167 (76.65%), Postives = 142/167 (85.03%), Query Frame = 1 
Query:   49 MGALQSAPPV-SSGTPFVPKKMLSVKDTIIVDMLSGPDHSKTVSYCVTDPDLNDNPIIFCSDAFAQLSGYLREEVEGRNCRFFQGAKTDPSDVAKIREAVKEKREACLCLLNYKKDGSTFHNQFFMTPLFDGGGDLAYYLGIQVQVKTPGAGQEPKNPGWVYTMGLH 546
            MG  QSA    +SGTPF P K+LSVKDTI+VDM++GP++SK VSYCVTDPDL DNPIIFCSD FA  +GY +EEVEGRNCRF QGAKTDP DV KIREAV EK+EACLCLLNYKKDGSTFHNQFF+TP+FD  G LAY+LGIQVQVKT   GQEP NPGW+YTMGLH
Sbjct:    1 MGGAQSAETTPTSGTPFKPSKLLSVKDTILVDMMNGPENSKVVSYCVTDPDLEDNPIIFCSDGFADFTGYAKEEVEGRNCRFLQGAKTDPGDVTKIREAVTEKKEACLCLLNYKKDGSTFHNQFFLTPMFDAEGTLAYFLGIQVQVKTAAPGQEPANPGWIYTMGLH 167
[Close]
BLAST of mRNA_H-elongata_contig20203.5716.1 vs. uniprot
Match: A0A126WZ19_SARFS (Putative LOV domain-containing protein n=6 Tax=Sargassum TaxID=3015 RepID=A0A126WZ19_SARFS)

HSP 1 Score: 251 bits (641), Expect = 2.970e-80
Identity = 118/166 (71.08%), Postives = 139/166 (83.73%), Query Frame = 1 
Query:   49 MGALQSAPPVSSGTPFVPKKMLSVKDTIIVDMLSGPDHSKTVSYCVTDPDLNDNPIIFCSDAFAQLSGYLREEVEGRNCRFFQGAKTDPSDVAKIREAVKEKREACLCLLNYKKDGSTFHNQFFMTPLFDGGGDLAYYLGIQVQVKTPGAGQEP-KNPGWVYTMGL 543
            MGA QS+     GTPFVPKK LSVKD IIVDML+GPDHSKT+ YCV+DPDL DNPIIFCSD F++L GY REEVEGRNCRF QGAKTDP D+A+IR+A+KE +EACLCL+NYKKDGS F+NQF++ PLFD GG LAY+LGIQV+V+T    Q+P KN GW++TM L
Sbjct:    1 MGAEQSSSSDLLGTPFVPKKQLSVKDVIIVDMLNGPDHSKTLCYCVSDPDLGDNPIIFCSDGFSELVGYTREEVEGRNCRFLQGAKTDPGDIAEIRDAIKENKEACLCLINYKKDGSAFNNQFYLVPLFDAGGQLAYFLGIQVEVETLDDEQQPPKNLGWLHTMCL 166
[Close]
BLAST of mRNA_H-elongata_contig20203.5716.1 vs. uniprot
Match: A0A6U0JAP0_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0JAP0_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.260e-52
Identity = 85/158 (53.80%), Postives = 109/158 (68.99%), Query Frame = 1 
Query:   73 PVSSGTPFVPKKMLSVKDTIIVDMLSGPDHSKTVSYCVTDPDLNDNPIIFCSDAFAQLSGYLREEVEGRNCRFFQGAKTDPSDVAKIREAVKEKREACLCLLNYKKDGSTFHNQFFMTPLFDGGGDLAYYLGIQVQVKTPGAGQEPKNPGWVYTMGLH 546
            P  S   FV KK LS +D  IVDML+   H + VS+C+ DPD  D PI+F SD F   +GY   E+EGRNCRF QG  T+ +DV KIR A+K ++E  + LLNYKKDG++F+N+FF++PL++  G LAYY+G+Q  VK  G GQ P NPGWVY  GLH
Sbjct:   59 PAPSQRQFVAKKELSERDATIVDMLNSAGH-EDVSFCLCDPDQEDCPIVFASDGFCNFTGYAVSEIEGRNCRFLQGPGTEKADVDKIRSAIKSEKEESVNLLNYKKDGTSFNNEFFLSPLYEEDGKLAYYIGVQCSVKKLGPGQAPANPGWVYAQGLH 215
[Close]
BLAST of mRNA_H-elongata_contig20203.5716.1 vs. uniprot
Match: A0A7S4J4U8_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J4U8_9STRA)

HSP 1 Score: 176 bits (447), Expect = 7.240e-51
Identity = 81/156 (51.92%), Postives = 107/156 (68.59%), Query Frame = 1 
Query:   79 SSGTPFVPKKMLSVKDTIIVDMLSGPDHSKTVSYCVTDPDLNDNPIIFCSDAFAQLSGYLREEVEGRNCRFFQGAKTDPSDVAKIREAVKEKREACLCLLNYKKDGSTFHNQFFMTPLFDGGGDLAYYLGIQVQVKTPGAGQEPKNPGWVYTMGLH 546
            SS   F P+K L  +D  I+DML+   H ++V +CV DPDL D PIIF SD F   +GY  EE+EG+NCRF QG +T   DV +IR+A+KE++E C+ LLNY+KDGS+F N+FF++PL D    LAY++G+Q  V   G GQ P N GWVY+ G H
Sbjct:   25 SSARQFEPEKRLCERDYTIIDMLNSKGH-ESVCFCVCDPDLKDMPIIFSSDGFCDFTGYSHEEIEGKNCRFLQGTETSTEDVDRIRKAIKEQKEECVNLLNYRKDGSSFINEFFISPLLDDNEKLAYFIGVQCSVPKKGPGQMPSNAGWVYSQGNH 179
[Close]
BLAST of mRNA_H-elongata_contig20203.5716.1 vs. uniprot
Match: A0A126WWA7_9STRA (Putative LOV domain-containing protein n=1 Tax=Synura petersenii TaxID=52555 RepID=A0A126WWA7_9STRA)

HSP 1 Score: 175 bits (443), Expect = 5.350e-50
Identity = 80/151 (52.98%), Postives = 108/151 (71.52%), Query Frame = 1 
Query:   94 FVPKKMLSVKDTIIVDMLSGPDHSKTVSYCVTDPDLNDNPIIFCSDAFAQLSGYLREEVEGRNCRFFQGAKTDPSDVAKIREAVKEKREACLCLLNYKKDGSTFHNQFFMTPLFDGGGDLAYYLGIQVQVKTPGAGQEPKNPGWVYTMGLH 546
            F+ +K L  KD I+VDML G + +K V Y VTDPDL+DNPI+F S+ F + +GY + E+EGRNCRF QGA TDP D++ IR+A++++ +  +C+ NY K+G  F NQFFM PL D    LAY+LG+QV V     GQ+ +NPGW+YTMG H
Sbjct:   50 FISQKKLCPKDQIVVDML-GMNENKNVCYLVTDPDLDDNPIVFTSEGFCKYTGYEKNEIEGRNCRFLQGAGTDPKDISLIRDAIRKEIDVNVCIQNYCKNGKPFMNQFFMCPLRDENKKLAYFLGVQVVVPKKAPGQQQENPGWIYTMGNH 199
[Close]
BLAST of mRNA_H-elongata_contig20203.5716.1 vs. uniprot
Match: A0A7S2I3C2_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I3C2_9STRA)

HSP 1 Score: 173 bits (439), Expect = 1.210e-49
Identity = 85/163 (52.15%), Postives = 112/163 (68.71%), Query Frame = 1 
Query:   58 LQSAPPVSSGTPFVPKKMLSVKDTIIVDMLSGPDHSKTVSYCVTDPDLNDNPIIFCSDAFAQLSGYLREEVEGRNCRFFQGAKTDPSDVAKIREAVKEKREACLCLLNYKKDGSTFHNQFFMTPLFDGGGDLAYYLGIQVQVKTPGAGQEPKNPGWVYTMGLH 546
            +QS PP      F P+K +S +D+IIVDML+ P H + VS+CV DPDL D PII+ S AF   +GY   E+EG+NCRF QG +T+ SDV +IR A+K +    + LLNYKKDG+ F N+FF++PL D    L Y++G+QV+V   G GQ P NPGWVYT+G H
Sbjct:   24 MQSPPPRQ----FQPEKQISERDSIIVDMLNSPGH-EDVSFCVCDPDLADCPIIYVSSAFCTFTGYDHTEIEGKNCRFLQGPETEKSDVDRIRAAIKSEVATNVNLLNYKKDGTKFINEFFISPLRDENQKLLYFIGVQVEVPKQGPGQAPSNPGWVYTVGNH 181
[Close]
BLAST of mRNA_H-elongata_contig20203.5716.1 vs. uniprot
Match: A0A835ZDN1_9STRA (PAS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDN1_9STRA)

HSP 1 Score: 172 bits (436), Expect = 2.910e-49
Identity = 83/160 (51.88%), Postives = 109/160 (68.12%), Query Frame = 1 
Query:   70 PPVSSGTPFVPKKMLSVKDTIIVDMLSGPDHSKTVSYCVTDPDLNDNPIIFCSDAFAQLSGYLREEVEGRNCRFFQGAKTDPSDVAKIREAVKEKREACLCLLNYKKDGSTFHNQFFMTPLFDGG-GDLAYYLGIQVQVKTPGAGQEPKNPGWVYTMGLH 546
            P V++   F P K L  KD I+VDML+  D    + + VTDPDL DNPI+F S+ F++ +GY + E+EGRNCRF QG +T+P+DV  IR A+  + +A +CLLNY+KDG+ F NQFF+ PL D   G +AYYLG+Q  V+    GQ  KN GWVY MGLH
Sbjct:   18 PLVTASGDFEPSKELKPKDMILVDMLNSRDEPD-ICWVVTDPDLEDNPIVFSSEGFSRYTGYAKSEIEGRNCRFLQGKETNPADVETIRAAIGAQTDANVCLLNYRKDGTAFLNQFFICPLHDAATGAVAYYLGVQAAVRQKEGGQTQKNAGWVYQMGLH 176
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20203.5716.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A126WXS3_9PHAE1.910e-9380.72Putative LOV domain-containing protein n=1 Tax=Des... [more]
A0A6H5L122_9PHAE1.020e-9278.92PAS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A126X2E3_9PHAE1.360e-9077.71Putative LOV domain-containing protein n=2 Tax=Scy... [more]
A0A126WVC6_9PHAE8.600e-9076.65Putative LOV domain-containing protein n=2 Tax=Ect... [more]
A0A126WZ19_SARFS2.970e-8071.08Putative LOV domain-containing protein n=6 Tax=Sar... [more]
A0A6U0JAP0_9STRA1.260e-5253.80Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S4J4U8_9STRA7.240e-5151.92Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A126WWA7_9STRA5.350e-5052.98Putative LOV domain-containing protein n=1 Tax=Syn... [more]
A0A7S2I3C2_9STRA1.210e-4952.15Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A835ZDN1_9STRA2.910e-4951.88PAS domain-containing protein n=1 Tax=Tribonema mi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20203contigH-elongata_contig20203:1615..5443 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score243.0
Seed ortholog evalue9.7e-62
Seed eggNOG ortholog2880.D7FXV6
EggNOG free text desc.Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
EggNOG OGs2CYKT@1,2S523@2759
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPAS domain
Ec32 orthologEc-23_001350.1
Exons6
Model size1058
Cds size504
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20203.5716.1prot_H-elongata_contig20203.5716.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig20203 1663..4937 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930136.8668199-UTR-H-elongata_contig20203:1614..16621622930136.8668199-UTR-H-elongata_contig20203:1614..1662Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20203 1615..1662 +
1691679295.0011759-UTR-H-elongata_contig20203:1614..16621691679295.0011759-UTR-H-elongata_contig20203:1614..1662Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20203 1615..1662 +
1622930136.9899561-UTR-H-elongata_contig20203:4937..54431622930136.9899561-UTR-H-elongata_contig20203:4937..5443Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20203 4938..5443 +
1691679295.068301-UTR-H-elongata_contig20203:4937..54431691679295.068301-UTR-H-elongata_contig20203:4937..5443Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20203 4938..5443 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930136.8801963-CDS-H-elongata_contig20203:1662..17371622930136.8801963-CDS-H-elongata_contig20203:1662..1737Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20203 1663..1737 +
1691679295.0123591-CDS-H-elongata_contig20203:1662..17371691679295.0123591-CDS-H-elongata_contig20203:1662..1737Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20203 1663..1737 +
1622930136.8909247-CDS-H-elongata_contig20203:2467..25421622930136.8909247-CDS-H-elongata_contig20203:2467..2542Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20203 2468..2542 +
1691679295.021657-CDS-H-elongata_contig20203:2467..25421691679295.021657-CDS-H-elongata_contig20203:2467..2542Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20203 2468..2542 +
1622930136.9218967-CDS-H-elongata_contig20203:3085..31681622930136.9218967-CDS-H-elongata_contig20203:3085..3168Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20203 3086..3168 +
1691679295.031251-CDS-H-elongata_contig20203:3085..31681691679295.031251-CDS-H-elongata_contig20203:3085..3168Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20203 3086..3168 +
1622930136.94275-CDS-H-elongata_contig20203:3613..36381622930136.94275-CDS-H-elongata_contig20203:3613..3638Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20203 3614..3638 +
1691679295.0411994-CDS-H-elongata_contig20203:3613..36381691679295.0411994-CDS-H-elongata_contig20203:3613..3638Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20203 3614..3638 +
1622930136.9587662-CDS-H-elongata_contig20203:4140..42871622930136.9587662-CDS-H-elongata_contig20203:4140..4287Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20203 4141..4287 +
1691679295.0504963-CDS-H-elongata_contig20203:4140..42871691679295.0504963-CDS-H-elongata_contig20203:4140..4287Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20203 4141..4287 +
1622930136.9732785-CDS-H-elongata_contig20203:4838..49371622930136.9732785-CDS-H-elongata_contig20203:4838..4937Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20203 4839..4937 +
1691679295.0608253-CDS-H-elongata_contig20203:4838..49371691679295.0608253-CDS-H-elongata_contig20203:4838..4937Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20203 4839..4937 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig20203.5716.1

>prot_H-elongata_contig20203.5716.1 ID=prot_H-elongata_contig20203.5716.1|Name=mRNA_H-elongata_contig20203.5716.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=168bp
MGALQSAPPVSSGTPFVPKKMLSVKDTIIVDMLSGPDHSKTVSYCVTDPD
LNDNPIIFCSDAFAQLSGYLREEVEGRNCRFFQGAKTDPSDVAKIREAVK
EKREACLCLLNYKKDGSTFHNQFFMTPLFDGGGDLAYYLGIQVQVKTPGA
GQEPKNPGWVYTMGLHI*
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mRNA from alignment at H-elongata_contig20203:1615..5443+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig20203.5716.1 ID=mRNA_H-elongata_contig20203.5716.1|Name=mRNA_H-elongata_contig20203.5716.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3829bp|location=Sequence derived from alignment at H-elongata_contig20203:1615..5443+ (Himanthalia elongata Himel1 dioecious)
TCTGTTGTTTCCGAATACTACTACTCAGCGGGACCTACTCAATCCGTCAT
GGGCGCATTGCAGAGTGCACCACCCGTGTCGTCGGGGACGCCTTTCGTCC
CGAAAAAGATGCTCAGTGTCAAGGTGACTCAAGATAAATCAACATGATGA
CGTCTACTGGTATAGCGTTGTAGCCCGAAACATGAATCATGCGTATGTGT
GTGTCGCGCGTGCTCACTTATCTCCTTGTGTTGTGTCTCGTTTAACCACT
TGAGGTGTTTCCTTCCACAACACAGAGGAACATGTTTTGTTTTTCACTCT
CTTCTTTTCTTGGCATCGTTTTCTCTCTCAATGTGTGACGTTTTTTTTAA
TATGTCTTCCCCTGCCTGTACATTGACATACATACCATCCTCGTAAGAAT
TATTGCTGTATTCTCCACATTATTATTAGTATATTTATCGTTCCCCAACG
GGAGACCCAGCGGCCATCTACGACGCCCATCGCTGGTGTAATATAACCCC
GCTTGATTCGTTACGACTGTAGGCCAGACTTTTCCGATCTCCGCACGGCC
GAACACCACTACACCGTTGGAACTTTCCGATGAGACAGGAAATGAGCACA
CGCTCCACGCCACCGTTGTTGAACTCCACCGTCGATGCTTGGCTAGTCGT
CCTTCGCTTGCGAGTACTGATTATGTGTACTTTGGACCACAGGTGACCAG
TTTCGCCGTTTTGCCTCAACCAAGACTGCGCCGTTCAACCTCACCCGGTG
CAGTCCACCGGCTGGATATGTTATCTTGCTAAGGGTGTTTATTTTTTACT
TTCACATTGATCACTACCCCGGGCATCGATTTAAATTCGTGGTATTTTGG
AAGGACACTATAATCGTGGACATGCTGAGCGGTCCGGATCACAGCAAGAC
CGTAAGCTACTGCGTCACGGATCCCGATGTGAGCTTGGCAGAGTTCGACT
CGCGAGCCCGCTCTAGCGAAGATGCCATAAGCACAGTAGTATTTATACTG
CGTGTCGCTGTCAACGAAGGCTTTGGCGTGGAGTGTGAGGGGGGGCTGGT
ATCGGCATTGCTCGACTGTAATACTAGGAAGTGCTACCGTACCATTTCGT
TCAGGAAAGGACTCCGAAGTACTCTTATAGATTGTTATATGTTAGTAGTT
GTTATCGAAGAAGGGATGTAACTTTTTCGTCACCTGAACAGTTCGAAATA
AAGGGAACAATCGTGAGTGAAGTGTCGATATAATCATCAGGAGTTTACTG
GCGTATCTCAGATCCTGGCCAGTGCCGTGGGGAGACGTTTTTTGACCCGC
TTACCGAAGGGTTTGCCTCAGCGATGCCGCGGTGTAGGGGCACAGAGATG
TATAATATTATCATTAGTGTAGACGTCCCCGCGCCGCCCGACCTACGAAT
TTCATGAAACGCTCTTTGCCTTTCCGCAACGCCCATATCGCATCGGCTTC
GTCTTCGCTCGGAGGGACCAGCTTAATGATAATCCAATAATATTCTGCAG
CGACGCCTTCGCCCAACTATCGGGATACCTTAGGGAAGAGGTGGAGGGAC
GAAAGTGAGGACAAACGCCGCACAACTGGTTCCCACTGCCGAAACCACCC
GGTTGTGTAATTTGCGAGGTGCTCGCAAGGCTCGGGATGCGTTTTTTTTC
TTAGGACGGACGGTCTCTGTGACGCGTTCGCCGCGGGAACCAACAAGAAG
ATACGCCCGAATTTTCCCTGTGCGATGACTCATCGTGGAAGAGTCTCTGC
AGGCACACCCAGCACACAGCCCCCTTTCTACGAAGGCGAAGTTGATCGGC
CATCACGTAACATTGGCGAGTAAATGTCCCAGGCAGTGGATATTGCTGAA
TGACACTTAAATTCTCTTTAGCTCGTTTGCTTATCGTTGTGCTCGAATTT
TCGAAACAACGTACTGCCTCGATACCACCAACCCCGGCGTCCTCCTCGAC
CTCGGCACGTGTGGTTCCGGTGGAAATTCTTGGCCGACTGCCGGAGCAGC
TGTCGCTTTTTTCAGGGAGCCAAGGTGAGCTGCCATTCAGAGGACTATTG
CAGGAATGGGTGAGGACGCGAGGAAAATTAAAATTGTAGTATATTGAGTG
AACTTGGACGCAATGTTGTTTTTCTGTGGCACGAAAGAAGTACATTAACA
AGTAATTCGTGGTGTTAACAGGGAAGATGATCACGCACGCGTCAAACAGC
CACCCGATGCGATCAGCAAAGGTTGCGCTCGCCACTTTCTGTGGCGCGTT
GTGAACAAGAAGCGATCTCATGTGATACTTTTGATGGCCGGCACGCACCA
TTCGAAAGAAGCAAGCCACCGTAGAGAAGAAGTCCTCCCACTAGCCCTCC
TTCGTCTGTGTTCTAAATATGTACGCCCTGTCGCACGAATCGAACCCTAG
GCGTCAGCGTCATTCCTCAGCGACCATCATTTCCTCCCCGCCTCGTGCCA
CTGCCGTCACATCGTATACTGCCGGTCGATACGCCCTCTGTCGGTGGGAC
CACTCGCCTGATTTAAACCTGGACAGACCGACCCAAGTGATGTCGCTAAA
ATCCGCGAGGCCGTGAAGGAGAAGCGGGAGGCCTGCTTGTGCTTGTTAAA
CTACAAAAAGGACGGGTCGACGTTTCACAATCAGTTCTTCATGACGCCGC
TGTTCGACGGTGGGGGTGATCTTGTGAGTCGCACGGCGTCGTTTAGGTGG
AGGCATCAGAGTGTGCCGTTTCAACAACCTCAACTCTTCGCCTTTCCCCT
GAAAGGAAATATTGAAAGAACGGCTCAAGGTGTCAAAATGTTCAAGATAT
AAGCCTTTCGTGTCATGGCGACAAATACTTGTTTTCTGCGTGATGTGTTC
CCAATGCCCCCCCCCCTCCTCCGCGAACGCTGCAAGTATTGTTGGTACGA
TATTCTCACGAAAGTGGCGCGAGAAGATTTAGCGTCTGTGGTGTCCATAT
CTTTGGTCGCCTGGTTTCCGTTTGATATTTCATTCATGACTTCTGCGTGT
TCACCCATCTCGTTGAGTGGATCGTGCGCTGCCCTGGGGTTTTCCTTTCC
ATCCTTGGCGTCCTTCCAGAAGTTTTGCTTCTTCCCAATTTTAGTTATTC
CTTTGATCGCGATATTCCTTTCTTGCTAAGTGGTGGCTGTCTCTCTCTAC
TGCTGACACCATTAGAATATATTGTGGATGCCTCGTCGCTAACGTTCTAA
GTCCAATCGATCCCTCTCCGGTAGGCGTACTATCTCGGGATCCAGGTCCA
GGTGAAGACTCCGGGTGCTGGTCAGGAACCAAAGAATCCCGGGTGGGTGT
ACACCATGGGCCTACATATATAATGATGCCCGCGCATATTTTTGCGTAGG
GAATAGGATGGGTGAGGACGCTAGAGGTGCGCGGCGAATAATGTATGATC
CGCGCGTCTGTAGTAAGCAATAACGATAAGGAATAAGATGACAACATCGA
CAGAATCTGGTAAAGATACCCCCGATACTGGTAAATATAAATAGAGCATT
CATGTGACTCCGTGGATCGCAGATTAGACTTGGCAACAGGAAATAATCCT
AGGCGTTTGGGTAACTATTGAGTATTTTCAGCCGTAAAAATCCTGTCTGC
TGGCATTTCGGTGGTAACACACGCACACCCTATAGACATGCCAACAACCT
CACTTGATTAAGGTATTTGGTAGGACTTCCTTTTGTATCGCTATTATAGT
TCTCTTGCGTGAAGAGCCTTCTCGCATTTTACATTGTTTTTTTCGTGGAA
CGGCATGGTGTGAATAAGAGGAAGAAATTATAGTTGATCTCTGGAACCTA
TCCTGTTTTTCTTACGTTAGATGGAACGC
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Coding sequence (CDS) from alignment at H-elongata_contig20203:1615..5443+

>mRNA_H-elongata_contig20203.5716.1 ID=mRNA_H-elongata_contig20203.5716.1|Name=mRNA_H-elongata_contig20203.5716.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1008bp|location=Sequence derived from alignment at H-elongata_contig20203:1615..5443+ (Himanthalia elongata Himel1 dioecious)
ATGGGCGCATTGCAGAGTGCACCACCCGTGTCGTCGGGGACGCCTTTCGT
CCCGAAAAAGATGCTCAGTGTCAAGATGGGCGCATTGCAGAGTGCACCAC
CCGTGTCGTCGGGGACGCCTTTCGTCCCGAAAAAGATGCTCAGTGTCAAG
GACACTATAATCGTGGACATGCTGAGCGGTCCGGATCACAGCAAGACCGT
AAGCTACTGCGTCACGGATCCCGATGACACTATAATCGTGGACATGCTGA
GCGGTCCGGATCACAGCAAGACCGTAAGCTACTGCGTCACGGATCCCGAT
CTTAATGATAATCCAATAATATTCTGCAGCGACGCCTTCGCCCAACTATC
GGGATACCTTAGGGAAGAGGTGGAGGGACGAAACTTAATGATAATCCAAT
AATATTCTGCAGCGACGCCTTCGCCCAACTATCGGGATACCTTAGGGAAG
AGGTGGAGGGACGAAACTGTCGCTTTTTTCAGGGAGCCAAGCTGTCGCTT
TTTTCAGGGAGCCAAGACCGACCCAAGTGATGTCGCTAAAATCCGCGAGG
CCGTGAAGGAGAAGCGGGAGGCCTGCTTGTGCTTGTTAAACTACAAAAAG
GACGGGTCGACGTTTCACAATCAGTTCTTCATGACGCCGCTGTTCGACGG
TGGGGGTGATCTTACCGACCCAAGTGATGTCGCTAAAATCCGCGAGGCCG
TGAAGGAGAAGCGGGAGGCCTGCTTGTGCTTGTTAAACTACAAAAAGGAC
GGGTCGACGTTTCACAATCAGTTCTTCATGACGCCGCTGTTCGACGGTGG
GGGTGATCTTGCGTACTATCTCGGGATCCAGGTCCAGGTGAAGACTCCGG
GTGCTGGTCAGGAACCAAAGAATCCCGGGTGGGTGTACACCATGGGCCTA
CATATATAAGCGTACTATCTCGGGATCCAGGTCCAGGTGAAGACTCCGGG
TGCTGGTCAGGAACCAAAGAATCCCGGGTGGGTGTACACCATGGGCCTAC
ATATATAA
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